| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51892429
Identifier: 51892429
GI number: 51892429
Start: 1428356
End: 1428955
Strand: Reverse
Name: 51892429
Synonym: STH1291
Alternate gene names: NA
Gene position: 1428955-1428356 (Counterclockwise)
Preceding gene: 51892431
Following gene: 51892428
Centisome position: 40.07
GC content: 59.17
Gene sequence:
>600_bases TTGCACGAAGTCCGGGTTATTCACGCGAAACTTGAGCTAGAGGGGCTGTTCGAGTTTCTCGATGACGTCTTGACGCATGT GGCAACGCAGACGACACAACACGAACGACTGCGCTTCTGGCTGCGGGAATCGACGCGGAGCGCCTATGATGCACCGAGCC ATCCGGCCGTCCCGTTTCTCTCCAAGCCCCCTGCGGATACGGTTGTTTTGTTGGGCTACGTTCGAAGCCCGGAACATCTC CGTTGGATCCATGAGCAACGCCTGTACAACATGCGGACTGGTGGACGACGAGGCAGCGTACTGCCGGGTTCCCGGGTGTT GTCCGCGGAGTTGGTGGTCCTGTATGGGCCACATATGAGGACAGCTGAGATGTGGAGGGTTGCAGGAACGCCCCTGATGC TGAGCGAGGAAGAGGTGCGGGAGCTCCATTATCCAACCCCGCGCGGACGTTACGTATGCCTTCCCTTGGAACCGCTTCCG TCGGTCGAGTTGCTGCAGAAGATGTCCAGCGACCACGTGAGAAGGGTAAAGGAAAGGCTGAGTCCGACGTCGTACCCCGG GGAACCCGTTGCGGTGACCTGGTTCGAGTTGCTCCAGTAA
Upstream 100 bases:
>100_bases TGAGACTGCATCAGTCGAACCTCCACATGGTGGATTGGGAGCGGCCACACTCCCACCATGTATCATTGGTTCTGACTGAT GCTTTTTCAATGGGTTTCCA
Downstream 100 bases:
>100_bases GCGCAGACACCCCTGCCTCTGCTGACCCAGAGGCAGGGGTACTTATCCAGCGTTTCGCTACTCTACTCGTTCGGGGGACT GTGGCCATGACACGCGAATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MHEVRVIHAKLELEGLFEFLDDVLTHVATQTTQHERLRFWLRESTRSAYDAPSHPAVPFLSKPPADTVVLLGYVRSPEHL RWIHEQRLYNMRTGGRRGSVLPGSRVLSAELVVLYGPHMRTAEMWRVAGTPLMLSEEEVRELHYPTPRGRYVCLPLEPLP SVELLQKMSSDHVRRVKERLSPTSYPGEPVAVTWFELLQ
Sequences:
>Translated_199_residues MHEVRVIHAKLELEGLFEFLDDVLTHVATQTTQHERLRFWLRESTRSAYDAPSHPAVPFLSKPPADTVVLLGYVRSPEHL RWIHEQRLYNMRTGGRRGSVLPGSRVLSAELVVLYGPHMRTAEMWRVAGTPLMLSEEEVRELHYPTPRGRYVCLPLEPLP SVELLQKMSSDHVRRVKERLSPTSYPGEPVAVTWFELLQ >Mature_199_residues MHEVRVIHAKLELEGLFEFLDDVLTHVATQTTQHERLRFWLRESTRSAYDAPSHPAVPFLSKPPADTVVLLGYVRSPEHL RWIHEQRLYNMRTGGRRGSVLPGSRVLSAELVVLYGPHMRTAEMWRVAGTPLMLSEEEVRELHYPTPRGRYVCLPLEPLP SVELLQKMSSDHVRRVKERLSPTSYPGEPVAVTWFELLQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22952; Mature: 22952
Theoretical pI: Translated: 7.88; Mature: 7.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHEVRVIHAKLELEGLFEFLDDVLTHVATQTTQHERLRFWLRESTRSAYDAPSHPAVPFL CCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC SKPPADTVVLLGYVRSPEHLRWIHEQRLYNMRTGGRRGSVLPGSRVLSAELVVLYGPHMR CCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHEEEEEEEECCCCC TAEMWRVAGTPLMLSEEEVRELHYPTPRGRYVCLPLEPLPSVELLQKMSSDHVRRVKERL HHHHHHHCCCCEEECHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHC SPTSYPGEPVAVTWFELLQ CCCCCCCCCCEEHHHHHHC >Mature Secondary Structure MHEVRVIHAKLELEGLFEFLDDVLTHVATQTTQHERLRFWLRESTRSAYDAPSHPAVPFL CCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC SKPPADTVVLLGYVRSPEHLRWIHEQRLYNMRTGGRRGSVLPGSRVLSAELVVLYGPHMR CCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHEEEEEEEECCCCC TAEMWRVAGTPLMLSEEEVRELHYPTPRGRYVCLPLEPLPSVELLQKMSSDHVRRVKERL HHHHHHHCCCCEEECHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHC SPTSYPGEPVAVTWFELLQ CCCCCCCCCCEEHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA