Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51892431

Identifier: 51892431

GI number: 51892431

Start: 1430601

End: 1432148

Strand: Reverse

Name: 51892431

Synonym: STH1293

Alternate gene names: NA

Gene position: 1432148-1430601 (Counterclockwise)

Preceding gene: 51892432

Following gene: 51892429

Centisome position: 40.16

GC content: 60.21

Gene sequence:

>1548_bases
GTGGAGCCGAGGGAGCTTTTCTCTCCCGACTCGGCCGATTGGCGAACCGGCAGGATGCGCCCCGGGCTTTACACCGGCAC
ACTGACGATCGTGGTGCTGTCCGGCGGAAGGCAGCTTGGTACGGCCCTCGTCGAGGTTCGGTCTCTCAAACTCGACTATC
TGAATGAGTATCGTTGGATGCTGGAGCAAATTGCGGACAGCATGGCAGAGCTGATCATGGAGCGGTTCGCGCCGACCGAG
CAGCGTTTTCGCTTCGATCAGACCGCAGAGGCCACGACGTTGTACACCCGCTTTGCCATGCTGAAGTGGCTCTTCTCCGG
GGAAGCCTTCGAGGCAGCGATTCACCAAATCCTGGCTCAACCCCACCGGGCATGGTCCGAGGAAACGGAGTGGCGGAAAC
CCGGCCAGCCCATCCGGGCATGTGCGCGCGTGACAAGGAGTCTGGCACGACCAGGCCCACGCGAGTACGGCGATACACCC
CTGCCCTTCACAGCCCTACCTAAGCATATTGCTGTCCCTCGGACGGAGGAGACGCTCGACACGCCAGAGAACCGCTTCAT
CAAGTTCATCCTTTCGGGTTGGCGAAATTTCACCGAGGAAGTTGAGCAGGCGCTCCTCTGCGCTCCCCCCTCCGCCCCCG
TACAGAGGGGACTTCTGGAGGTCAAGGCAGTTCGCGAACAGCTGCAGACGATCCTATCGGCCGGCCTGTTCCACGAAGTG
GGGGATCTCACATTTCTCCCGACGGGCAGCCAAGTGCTTCAGAAGCGATCAGGCTACCGCGACCTTTATCGGGCCTACCT
CCAGTTTGAAGCTGCAGCCCTCCTCACGTGGGACGGCGGTGAGGACGTGTATGGGGCTGGTAAGCGGGACGTAGCGACGT
TGTACGAGTACTGGGTGTTCCTCCAACTGGTGAAGGTGATGGAGCGCCTGTGTGGGAAGGAGTTTCACCTCAGTCAGTTA
GTTGAAGTAAGGCCGGACGGGATGGGGGTTGCTTTGCGACGTGGCAGGGCACGAGCCATCAAGGGAACCGTCCAGCGCCT
CGGTCGTACGCTCCAGGTCGAGCTTTGGTTCAACCGTTCCTTTGGACATCGCACGGGAAACCAGGGATCCTGGACCCGCC
CCATGCGCCCGGACTACTCCATCCGGATCAAACCGGATATGACCTACGGCGAACCCGATGAAGTCTGGATCCATTTTGAT
GCCAAGTATAGGGTGGAGAGTGTCACCGAACTCTTTGGCGAGGACCCCCGCACCGAAGAAGAGGAAGGTCGGTTACTGGA
TGAAGAACAGACGGCAGAGTCCCGCCAGTTGGCCAGACGCGCCGACCTTCTGAAGATGCACGCGTACCGGGACGCGATAC
GCCGATCAGCCGGGGCCTACGTGATCTACCCGGGTACGGAACGAGAGCTGCTACCCAGGTTCCATGAACTCCTTCCCGGA
CTCGGCGCTTTTGCCCTGAGACCGACCAAGGACGGGCAAGGTACCGGTCTAGCTCAAGTTTCACGCGAACAACTCGACAT
TCGTGGTGTTAAAAGGGCGTATGGGTAG

Upstream 100 bases:

>100_bases
TCCCGCTCTCGACCCCGCGCTCCCACCAGTCCAACTGCTGGAGGGTGCCGAGTACCGTTACGCGTTCCAACCGGAGGACG
GTTTCGACCTTCCCATCCGG

Downstream 100 bases:

>100_bases
GGAGTGGCCCGGTTCAGGGTAATCTCAGCTCCAGCCAGGGGAGTACCCCGGCTGAACACCAACCGCAGCGTGTCGCCGAG
GCACCGAATGGTTGCTCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 515; Mature: 515

Protein sequence:

>515_residues
MEPRELFSPDSADWRTGRMRPGLYTGTLTIVVLSGGRQLGTALVEVRSLKLDYLNEYRWMLEQIADSMAELIMERFAPTE
QRFRFDQTAEATTLYTRFAMLKWLFSGEAFEAAIHQILAQPHRAWSEETEWRKPGQPIRACARVTRSLARPGPREYGDTP
LPFTALPKHIAVPRTEETLDTPENRFIKFILSGWRNFTEEVEQALLCAPPSAPVQRGLLEVKAVREQLQTILSAGLFHEV
GDLTFLPTGSQVLQKRSGYRDLYRAYLQFEAAALLTWDGGEDVYGAGKRDVATLYEYWVFLQLVKVMERLCGKEFHLSQL
VEVRPDGMGVALRRGRARAIKGTVQRLGRTLQVELWFNRSFGHRTGNQGSWTRPMRPDYSIRIKPDMTYGEPDEVWIHFD
AKYRVESVTELFGEDPRTEEEEGRLLDEEQTAESRQLARRADLLKMHAYRDAIRRSAGAYVIYPGTERELLPRFHELLPG
LGAFALRPTKDGQGTGLAQVSREQLDIRGVKRAYG

Sequences:

>Translated_515_residues
MEPRELFSPDSADWRTGRMRPGLYTGTLTIVVLSGGRQLGTALVEVRSLKLDYLNEYRWMLEQIADSMAELIMERFAPTE
QRFRFDQTAEATTLYTRFAMLKWLFSGEAFEAAIHQILAQPHRAWSEETEWRKPGQPIRACARVTRSLARPGPREYGDTP
LPFTALPKHIAVPRTEETLDTPENRFIKFILSGWRNFTEEVEQALLCAPPSAPVQRGLLEVKAVREQLQTILSAGLFHEV
GDLTFLPTGSQVLQKRSGYRDLYRAYLQFEAAALLTWDGGEDVYGAGKRDVATLYEYWVFLQLVKVMERLCGKEFHLSQL
VEVRPDGMGVALRRGRARAIKGTVQRLGRTLQVELWFNRSFGHRTGNQGSWTRPMRPDYSIRIKPDMTYGEPDEVWIHFD
AKYRVESVTELFGEDPRTEEEEGRLLDEEQTAESRQLARRADLLKMHAYRDAIRRSAGAYVIYPGTERELLPRFHELLPG
LGAFALRPTKDGQGTGLAQVSREQLDIRGVKRAYG
>Mature_515_residues
MEPRELFSPDSADWRTGRMRPGLYTGTLTIVVLSGGRQLGTALVEVRSLKLDYLNEYRWMLEQIADSMAELIMERFAPTE
QRFRFDQTAEATTLYTRFAMLKWLFSGEAFEAAIHQILAQPHRAWSEETEWRKPGQPIRACARVTRSLARPGPREYGDTP
LPFTALPKHIAVPRTEETLDTPENRFIKFILSGWRNFTEEVEQALLCAPPSAPVQRGLLEVKAVREQLQTILSAGLFHEV
GDLTFLPTGSQVLQKRSGYRDLYRAYLQFEAAALLTWDGGEDVYGAGKRDVATLYEYWVFLQLVKVMERLCGKEFHLSQL
VEVRPDGMGVALRRGRARAIKGTVQRLGRTLQVELWFNRSFGHRTGNQGSWTRPMRPDYSIRIKPDMTYGEPDEVWIHFD
AKYRVESVTELFGEDPRTEEEEGRLLDEEQTAESRQLARRADLLKMHAYRDAIRRSAGAYVIYPGTERELLPRFHELLPG
LGAFALRPTKDGQGTGLAQVSREQLDIRGVKRAYG

Specific function: Unknown

COG id: COG1700

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58946; Mature: 58946

Theoretical pI: Translated: 8.07; Mature: 8.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPRELFSPDSADWRTGRMRPGLYTGTLTIVVLSGGRQLGTALVEVRSLKLDYLNEYRWM
CCCCCCCCCCCCCCCCCCCCCCEEECEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
LEQIADSMAELIMERFAPTEQRFRFDQTAEATTLYTRFAMLKWLFSGEAFEAAIHQILAQ
HHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHC
PHRAWSEETEWRKPGQPIRACARVTRSLARPGPREYGDTPLPFTALPKHIAVPRTEETLD
HHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCHHCCCCCHHHCC
TPENRFIKFILSGWRNFTEEVEQALLCAPPSAPVQRGLLEVKAVREQLQTILSAGLFHEV
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GDLTFLPTGSQVLQKRSGYRDLYRAYLQFEAAALLTWDGGEDVYGAGKRDVATLYEYWVF
CCEEECCCCHHHHHHHCCHHHHHHHHHHHHHEEEEEECCCCCCCCCCCHHHHHHHHHHHH
LQLVKVMERLCGKEFHLSQLVEVRPDGMGVALRRGRARAIKGTVQRLGRTLQVELWFNRS
HHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHCCCEEEEEEEEECC
FGHRTGNQGSWTRPMRPDYSIRIKPDMTYGEPDEVWIHFDAKYRVESVTELFGEDPRTEE
CCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCC
EEGRLLDEEQTAESRQLARRADLLKMHAYRDAIRRSAGAYVIYPGTERELLPRFHELLPG
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHCCC
LGAFALRPTKDGQGTGLAQVSREQLDIRGVKRAYG
CCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEPRELFSPDSADWRTGRMRPGLYTGTLTIVVLSGGRQLGTALVEVRSLKLDYLNEYRWM
CCCCCCCCCCCCCCCCCCCCCCEEECEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
LEQIADSMAELIMERFAPTEQRFRFDQTAEATTLYTRFAMLKWLFSGEAFEAAIHQILAQ
HHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHC
PHRAWSEETEWRKPGQPIRACARVTRSLARPGPREYGDTPLPFTALPKHIAVPRTEETLD
HHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCHHCCCCCHHHCC
TPENRFIKFILSGWRNFTEEVEQALLCAPPSAPVQRGLLEVKAVREQLQTILSAGLFHEV
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GDLTFLPTGSQVLQKRSGYRDLYRAYLQFEAAALLTWDGGEDVYGAGKRDVATLYEYWVF
CCEEECCCCHHHHHHHCCHHHHHHHHHHHHHEEEEEECCCCCCCCCCCHHHHHHHHHHHH
LQLVKVMERLCGKEFHLSQLVEVRPDGMGVALRRGRARAIKGTVQRLGRTLQVELWFNRS
HHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHCCCEEEEEEEEECC
FGHRTGNQGSWTRPMRPDYSIRIKPDMTYGEPDEVWIHFDAKYRVESVTELFGEDPRTEE
CCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCC
EEGRLLDEEQTAESRQLARRADLLKMHAYRDAIRRSAGAYVIYPGTERELLPRFHELLPG
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHCCC
LGAFALRPTKDGQGTGLAQVSREQLDIRGVKRAYG
CCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA