| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51892431
Identifier: 51892431
GI number: 51892431
Start: 1430601
End: 1432148
Strand: Reverse
Name: 51892431
Synonym: STH1293
Alternate gene names: NA
Gene position: 1432148-1430601 (Counterclockwise)
Preceding gene: 51892432
Following gene: 51892429
Centisome position: 40.16
GC content: 60.21
Gene sequence:
>1548_bases GTGGAGCCGAGGGAGCTTTTCTCTCCCGACTCGGCCGATTGGCGAACCGGCAGGATGCGCCCCGGGCTTTACACCGGCAC ACTGACGATCGTGGTGCTGTCCGGCGGAAGGCAGCTTGGTACGGCCCTCGTCGAGGTTCGGTCTCTCAAACTCGACTATC TGAATGAGTATCGTTGGATGCTGGAGCAAATTGCGGACAGCATGGCAGAGCTGATCATGGAGCGGTTCGCGCCGACCGAG CAGCGTTTTCGCTTCGATCAGACCGCAGAGGCCACGACGTTGTACACCCGCTTTGCCATGCTGAAGTGGCTCTTCTCCGG GGAAGCCTTCGAGGCAGCGATTCACCAAATCCTGGCTCAACCCCACCGGGCATGGTCCGAGGAAACGGAGTGGCGGAAAC CCGGCCAGCCCATCCGGGCATGTGCGCGCGTGACAAGGAGTCTGGCACGACCAGGCCCACGCGAGTACGGCGATACACCC CTGCCCTTCACAGCCCTACCTAAGCATATTGCTGTCCCTCGGACGGAGGAGACGCTCGACACGCCAGAGAACCGCTTCAT CAAGTTCATCCTTTCGGGTTGGCGAAATTTCACCGAGGAAGTTGAGCAGGCGCTCCTCTGCGCTCCCCCCTCCGCCCCCG TACAGAGGGGACTTCTGGAGGTCAAGGCAGTTCGCGAACAGCTGCAGACGATCCTATCGGCCGGCCTGTTCCACGAAGTG GGGGATCTCACATTTCTCCCGACGGGCAGCCAAGTGCTTCAGAAGCGATCAGGCTACCGCGACCTTTATCGGGCCTACCT CCAGTTTGAAGCTGCAGCCCTCCTCACGTGGGACGGCGGTGAGGACGTGTATGGGGCTGGTAAGCGGGACGTAGCGACGT TGTACGAGTACTGGGTGTTCCTCCAACTGGTGAAGGTGATGGAGCGCCTGTGTGGGAAGGAGTTTCACCTCAGTCAGTTA GTTGAAGTAAGGCCGGACGGGATGGGGGTTGCTTTGCGACGTGGCAGGGCACGAGCCATCAAGGGAACCGTCCAGCGCCT CGGTCGTACGCTCCAGGTCGAGCTTTGGTTCAACCGTTCCTTTGGACATCGCACGGGAAACCAGGGATCCTGGACCCGCC CCATGCGCCCGGACTACTCCATCCGGATCAAACCGGATATGACCTACGGCGAACCCGATGAAGTCTGGATCCATTTTGAT GCCAAGTATAGGGTGGAGAGTGTCACCGAACTCTTTGGCGAGGACCCCCGCACCGAAGAAGAGGAAGGTCGGTTACTGGA TGAAGAACAGACGGCAGAGTCCCGCCAGTTGGCCAGACGCGCCGACCTTCTGAAGATGCACGCGTACCGGGACGCGATAC GCCGATCAGCCGGGGCCTACGTGATCTACCCGGGTACGGAACGAGAGCTGCTACCCAGGTTCCATGAACTCCTTCCCGGA CTCGGCGCTTTTGCCCTGAGACCGACCAAGGACGGGCAAGGTACCGGTCTAGCTCAAGTTTCACGCGAACAACTCGACAT TCGTGGTGTTAAAAGGGCGTATGGGTAG
Upstream 100 bases:
>100_bases TCCCGCTCTCGACCCCGCGCTCCCACCAGTCCAACTGCTGGAGGGTGCCGAGTACCGTTACGCGTTCCAACCGGAGGACG GTTTCGACCTTCCCATCCGG
Downstream 100 bases:
>100_bases GGAGTGGCCCGGTTCAGGGTAATCTCAGCTCCAGCCAGGGGAGTACCCCGGCTGAACACCAACCGCAGCGTGTCGCCGAG GCACCGAATGGTTGCTCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 515; Mature: 515
Protein sequence:
>515_residues MEPRELFSPDSADWRTGRMRPGLYTGTLTIVVLSGGRQLGTALVEVRSLKLDYLNEYRWMLEQIADSMAELIMERFAPTE QRFRFDQTAEATTLYTRFAMLKWLFSGEAFEAAIHQILAQPHRAWSEETEWRKPGQPIRACARVTRSLARPGPREYGDTP LPFTALPKHIAVPRTEETLDTPENRFIKFILSGWRNFTEEVEQALLCAPPSAPVQRGLLEVKAVREQLQTILSAGLFHEV GDLTFLPTGSQVLQKRSGYRDLYRAYLQFEAAALLTWDGGEDVYGAGKRDVATLYEYWVFLQLVKVMERLCGKEFHLSQL VEVRPDGMGVALRRGRARAIKGTVQRLGRTLQVELWFNRSFGHRTGNQGSWTRPMRPDYSIRIKPDMTYGEPDEVWIHFD AKYRVESVTELFGEDPRTEEEEGRLLDEEQTAESRQLARRADLLKMHAYRDAIRRSAGAYVIYPGTERELLPRFHELLPG LGAFALRPTKDGQGTGLAQVSREQLDIRGVKRAYG
Sequences:
>Translated_515_residues MEPRELFSPDSADWRTGRMRPGLYTGTLTIVVLSGGRQLGTALVEVRSLKLDYLNEYRWMLEQIADSMAELIMERFAPTE QRFRFDQTAEATTLYTRFAMLKWLFSGEAFEAAIHQILAQPHRAWSEETEWRKPGQPIRACARVTRSLARPGPREYGDTP LPFTALPKHIAVPRTEETLDTPENRFIKFILSGWRNFTEEVEQALLCAPPSAPVQRGLLEVKAVREQLQTILSAGLFHEV GDLTFLPTGSQVLQKRSGYRDLYRAYLQFEAAALLTWDGGEDVYGAGKRDVATLYEYWVFLQLVKVMERLCGKEFHLSQL VEVRPDGMGVALRRGRARAIKGTVQRLGRTLQVELWFNRSFGHRTGNQGSWTRPMRPDYSIRIKPDMTYGEPDEVWIHFD AKYRVESVTELFGEDPRTEEEEGRLLDEEQTAESRQLARRADLLKMHAYRDAIRRSAGAYVIYPGTERELLPRFHELLPG LGAFALRPTKDGQGTGLAQVSREQLDIRGVKRAYG >Mature_515_residues MEPRELFSPDSADWRTGRMRPGLYTGTLTIVVLSGGRQLGTALVEVRSLKLDYLNEYRWMLEQIADSMAELIMERFAPTE QRFRFDQTAEATTLYTRFAMLKWLFSGEAFEAAIHQILAQPHRAWSEETEWRKPGQPIRACARVTRSLARPGPREYGDTP LPFTALPKHIAVPRTEETLDTPENRFIKFILSGWRNFTEEVEQALLCAPPSAPVQRGLLEVKAVREQLQTILSAGLFHEV GDLTFLPTGSQVLQKRSGYRDLYRAYLQFEAAALLTWDGGEDVYGAGKRDVATLYEYWVFLQLVKVMERLCGKEFHLSQL VEVRPDGMGVALRRGRARAIKGTVQRLGRTLQVELWFNRSFGHRTGNQGSWTRPMRPDYSIRIKPDMTYGEPDEVWIHFD AKYRVESVTELFGEDPRTEEEEGRLLDEEQTAESRQLARRADLLKMHAYRDAIRRSAGAYVIYPGTERELLPRFHELLPG LGAFALRPTKDGQGTGLAQVSREQLDIRGVKRAYG
Specific function: Unknown
COG id: COG1700
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58946; Mature: 58946
Theoretical pI: Translated: 8.07; Mature: 8.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEPRELFSPDSADWRTGRMRPGLYTGTLTIVVLSGGRQLGTALVEVRSLKLDYLNEYRWM CCCCCCCCCCCCCCCCCCCCCCEEECEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH LEQIADSMAELIMERFAPTEQRFRFDQTAEATTLYTRFAMLKWLFSGEAFEAAIHQILAQ HHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHC PHRAWSEETEWRKPGQPIRACARVTRSLARPGPREYGDTPLPFTALPKHIAVPRTEETLD HHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCHHCCCCCHHHCC TPENRFIKFILSGWRNFTEEVEQALLCAPPSAPVQRGLLEVKAVREQLQTILSAGLFHEV CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH GDLTFLPTGSQVLQKRSGYRDLYRAYLQFEAAALLTWDGGEDVYGAGKRDVATLYEYWVF CCEEECCCCHHHHHHHCCHHHHHHHHHHHHHEEEEEECCCCCCCCCCCHHHHHHHHHHHH LQLVKVMERLCGKEFHLSQLVEVRPDGMGVALRRGRARAIKGTVQRLGRTLQVELWFNRS HHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHCCCEEEEEEEEECC FGHRTGNQGSWTRPMRPDYSIRIKPDMTYGEPDEVWIHFDAKYRVESVTELFGEDPRTEE CCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCC EEGRLLDEEQTAESRQLARRADLLKMHAYRDAIRRSAGAYVIYPGTERELLPRFHELLPG HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHCCC LGAFALRPTKDGQGTGLAQVSREQLDIRGVKRAYG CCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MEPRELFSPDSADWRTGRMRPGLYTGTLTIVVLSGGRQLGTALVEVRSLKLDYLNEYRWM CCCCCCCCCCCCCCCCCCCCCCEEECEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH LEQIADSMAELIMERFAPTEQRFRFDQTAEATTLYTRFAMLKWLFSGEAFEAAIHQILAQ HHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHC PHRAWSEETEWRKPGQPIRACARVTRSLARPGPREYGDTPLPFTALPKHIAVPRTEETLD HHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCHHCCCCCHHHCC TPENRFIKFILSGWRNFTEEVEQALLCAPPSAPVQRGLLEVKAVREQLQTILSAGLFHEV CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH GDLTFLPTGSQVLQKRSGYRDLYRAYLQFEAAALLTWDGGEDVYGAGKRDVATLYEYWVF CCEEECCCCHHHHHHHCCHHHHHHHHHHHHHEEEEEECCCCCCCCCCCHHHHHHHHHHHH LQLVKVMERLCGKEFHLSQLVEVRPDGMGVALRRGRARAIKGTVQRLGRTLQVELWFNRS HHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHCCCEEEEEEEEECC FGHRTGNQGSWTRPMRPDYSIRIKPDMTYGEPDEVWIHFDAKYRVESVTELFGEDPRTEE CCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCC EEGRLLDEEQTAESRQLARRADLLKMHAYRDAIRRSAGAYVIYPGTERELLPRFHELLPG HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHCCC LGAFALRPTKDGQGTGLAQVSREQLDIRGVKRAYG CCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA