| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
Click here to switch to the map view.
The map label for this gene is 51892158
Identifier: 51892158
GI number: 51892158
Start: 1134980
End: 1135336
Strand: Reverse
Name: 51892158
Synonym: STH1020
Alternate gene names: NA
Gene position: 1135336-1134980 (Counterclockwise)
Preceding gene: 51892160
Following gene: 51892151
Centisome position: 31.84
GC content: 69.75
Gene sequence:
>357_bases ATGAGGGAATCGCGCCCCGCACGGCGAATATCGGATCAGGCGGTGATGGCGGTGTTCACCTTCACGCCCCAGGCGGCGCA GAAGCTGAAGCAGATCATCCAGGAGCGCGGCGGCAACCTGGCGCTCTCCATCGCTGCGGATCCCGAGGTGACCGGCGGTG CATGGCGGCTCACGCTGGTGCCGCGCCGGCCCTCGACGGCGGTGGTGAGCGGCGTGCCGGTGGAGGCCGATGCGGAGGCG CTGCGGCTGCTGGACGGCACGATCATCGACTGGGTGATGACGCCCGACGGACCGGGGCTGGGCATCTATGACCAGAACCT CGTGGACAACGACCCCCGGCGGCGCGGCAGGTTCTGA
Upstream 100 bases:
>100_bases CACAGCGCGACCGCGGCGATCGCGGCCACGGCCAGTGCGACGACGAGAACGCGGCGCACGCGCCTCCCCCCTTGCACAGG TTCGTCCTGTTAGGGTGTCC
Downstream 100 bases:
>100_bases CACGGACCTGCGGTTGACATACGCGGCAATGGGCTCGTATAATGGATGAGTCATGGGCGCCCGTAGCTCAGCAGGATAGA GCAGCAGTTTCCTAAACTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MRESRPARRISDQAVMAVFTFTPQAAQKLKQIIQERGGNLALSIAADPEVTGGAWRLTLVPRRPSTAVVSGVPVEADAEA LRLLDGTIIDWVMTPDGPGLGIYDQNLVDNDPRRRGRF
Sequences:
>Translated_118_residues MRESRPARRISDQAVMAVFTFTPQAAQKLKQIIQERGGNLALSIAADPEVTGGAWRLTLVPRRPSTAVVSGVPVEADAEA LRLLDGTIIDWVMTPDGPGLGIYDQNLVDNDPRRRGRF >Mature_118_residues MRESRPARRISDQAVMAVFTFTPQAAQKLKQIIQERGGNLALSIAADPEVTGGAWRLTLVPRRPSTAVVSGVPVEADAEA LRLLDGTIIDWVMTPDGPGLGIYDQNLVDNDPRRRGRF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12895; Mature: 12895
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRESRPARRISDQAVMAVFTFTPQAAQKLKQIIQERGGNLALSIAADPEVTGGAWRLTLV CCCCCCCHHCCCCEEEEEEEECHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEEE PRRPSTAVVSGVPVEADAEALRLLDGTIIDWVMTPDGPGLGIYDQNLVDNDPRRRGRF CCCCCCEEEECCCCCCCHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCHHCCCC >Mature Secondary Structure MRESRPARRISDQAVMAVFTFTPQAAQKLKQIIQERGGNLALSIAADPEVTGGAWRLTLV CCCCCCCHHCCCCEEEEEEEECHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEEE PRRPSTAVVSGVPVEADAEALRLLDGTIIDWVMTPDGPGLGIYDQNLVDNDPRRRGRF CCCCCCEEEECCCCCCCHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA