| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is folE [H]
Identifier: 51892128
GI number: 51892128
Start: 1108756
End: 1109319
Strand: Reverse
Name: folE [H]
Synonym: STH990
Alternate gene names: 51892128
Gene position: 1109319-1108756 (Counterclockwise)
Preceding gene: 51892130
Following gene: 51892127
Centisome position: 31.11
GC content: 68.26
Gene sequence:
>564_bases GTGGACAAGGCAAAGATTGAGCAGGCGGTGCGGATGATCCTGGAAGCGGTCGGCGAGGATCCGGACCGCGAGGGGCTGCT GGAGACGCCCCGCCGCGTGGCGGACTTCTACGAGGAGGTGTTCGCCGGGCTCCACCGGGACCCGGCTGAAAGGCTCACCG CGATCTTCAACGAGGACCACGAGGAGCTGGTGATCGTCCGCGACATCTCCTTCGAGTCCATGTGCGAGCATCACCTGCTG CCCTTCTTCGGCAAGGCGCACGTCGCCTACATCCCCCGCAGCGGCCGGGTGGTCGGGCTCTCCAAGCTGGCCCGGGTGGT CGAGGACTTCTCCCGGCGGCCACAGCTGCAGGAGCGGCTCACCGCCCAGATCGCCGACCTGCTGATGGAGAAGCTGAACC CCCTCGGCGTGCTGGTGGTCGTGGAAGCCGAGCACATGTGCATGACCATGCGCGGCGTGCGCAAGCCCGGATCCTCCACC ATCACCTCCGCGGTGCGGGGCGTCTTCCAGACCAGCGAGGCGACCCGGGCCGAGGCCATGGCCCTCATCCGCGGCGTCAG GTAG
Upstream 100 bases:
>100_bases GCGGTCCGTCCAAAGAGGGGTGGACCCCCGGCGGTCCGCCCCCTCGCGCCCCGGCGGGCTGCGAAGTCGTGACACGGAAA GGCGGTGACCACGGTTGTCC
Downstream 100 bases:
>100_bases CGAAGCCTCCGCAACCCCAGGGTTGCGGAGGCTTTCTCCTTCCACCAAGACCCTCCGCAAGTCGTGGAACCCTGTAATGG CAAGCCCCGTCCAATCTCAT
Product: GTP cyclohydrolase
Products: NA
Alternate protein names: GTP cyclohydrolase I; GTP-CH-I [H]
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MDKAKIEQAVRMILEAVGEDPDREGLLETPRRVADFYEEVFAGLHRDPAERLTAIFNEDHEELVIVRDISFESMCEHHLL PFFGKAHVAYIPRSGRVVGLSKLARVVEDFSRRPQLQERLTAQIADLLMEKLNPLGVLVVVEAEHMCMTMRGVRKPGSST ITSAVRGVFQTSEATRAEAMALIRGVR
Sequences:
>Translated_187_residues MDKAKIEQAVRMILEAVGEDPDREGLLETPRRVADFYEEVFAGLHRDPAERLTAIFNEDHEELVIVRDISFESMCEHHLL PFFGKAHVAYIPRSGRVVGLSKLARVVEDFSRRPQLQERLTAQIADLLMEKLNPLGVLVVVEAEHMCMTMRGVRKPGSST ITSAVRGVFQTSEATRAEAMALIRGVR >Mature_187_residues MDKAKIEQAVRMILEAVGEDPDREGLLETPRRVADFYEEVFAGLHRDPAERLTAIFNEDHEELVIVRDISFESMCEHHLL PFFGKAHVAYIPRSGRVVGLSKLARVVEDFSRRPQLQERLTAQIADLLMEKLNPLGVLVVVEAEHMCMTMRGVRKPGSST ITSAVRGVFQTSEATRAEAMALIRGVR
Specific function: Tetrahydrofolate biosynthesis; first step. [C]
COG id: COG0302
COG function: function code H; GTP cyclohydrolase I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase I family [H]
Homologues:
Organism=Homo sapiens, GI66932968, Length=177, Percent_Identity=54.2372881355932, Blast_Score=182, Evalue=1e-46, Organism=Homo sapiens, GI4503949, Length=177, Percent_Identity=54.2372881355932, Blast_Score=182, Evalue=1e-46, Organism=Homo sapiens, GI66932970, Length=154, Percent_Identity=48.7012987012987, Blast_Score=140, Evalue=5e-34, Organism=Homo sapiens, GI66932972, Length=136, Percent_Identity=54.4117647058823, Blast_Score=139, Evalue=1e-33, Organism=Escherichia coli, GI1788476, Length=174, Percent_Identity=41.9540229885057, Blast_Score=127, Evalue=5e-31, Organism=Caenorhabditis elegans, GI17560486, Length=178, Percent_Identity=52.247191011236, Blast_Score=182, Evalue=1e-46, Organism=Saccharomyces cerevisiae, GI6321706, Length=181, Percent_Identity=51.3812154696133, Blast_Score=180, Evalue=1e-46, Organism=Drosophila melanogaster, GI24656782, Length=177, Percent_Identity=49.1525423728814, Blast_Score=165, Evalue=2e-41, Organism=Drosophila melanogaster, GI24656796, Length=179, Percent_Identity=48.6033519553073, Blast_Score=163, Evalue=5e-41, Organism=Drosophila melanogaster, GI24656791, Length=179, Percent_Identity=48.6033519553073, Blast_Score=163, Evalue=6e-41,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001474 - InterPro: IPR020602 - InterPro: IPR018234 [H]
Pfam domain/function: PF01227 GTP_cyclohydroI [H]
EC number: =3.5.4.16 [H]
Molecular weight: Translated: 21040; Mature: 21040
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: PS00859 GTP_CYCLOHYDROL_1_1 ; PS00860 GTP_CYCLOHYDROL_1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKAKIEQAVRMILEAVGEDPDREGLLETPRRVADFYEEVFAGLHRDPAERLTAIFNEDH CCHHHHHHHHHHHHHHHCCCCCCCCHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCC EELVIVRDISFESMCEHHLLPFFGKAHVAYIPRSGRVVGLSKLARVVEDFSRRPQLQERL CCEEEEECCCHHHHHHHHCCCHHCCCEEEEECCCCCEECHHHHHHHHHHHHHCCHHHHHH TAQIADLLMEKLNPLGVLVVVEAEHMCMTMRGVRKPGSSTITSAVRGVFQTSEATRAEAM HHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHH ALIRGVR HHHHCCC >Mature Secondary Structure MDKAKIEQAVRMILEAVGEDPDREGLLETPRRVADFYEEVFAGLHRDPAERLTAIFNEDH CCHHHHHHHHHHHHHHHCCCCCCCCHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCC EELVIVRDISFESMCEHHLLPFFGKAHVAYIPRSGRVVGLSKLARVVEDFSRRPQLQERL CCEEEEECCCHHHHHHHHCCCHHCCCEEEEECCCCCEECHHHHHHHHHHHHHCCHHHHHH TAQIADLLMEKLNPLGVLVVVEAEHMCMTMRGVRKPGSSTITSAVRGVFQTSEATRAEAM HHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHH ALIRGVR HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA