| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is sfsA
Identifier: 51892087
GI number: 51892087
Start: 1064891
End: 1065646
Strand: Reverse
Name: sfsA
Synonym: STH949
Alternate gene names: 51892087
Gene position: 1065646-1064891 (Counterclockwise)
Preceding gene: 51892098
Following gene: 51892086
Centisome position: 29.88
GC content: 71.16
Gene sequence:
>756_bases GTGAAAGGAGCAGAACCGTTGGCTGAACTTCGTCTGCGGGCCACCTTTCTCGAACGCCCCAACCGCTTCGTCGCCCGGGT CCGCCTGGAGGACGGCCGGGAGGTGCCGGTGCACGTGGCCTCATCGGGCCGTATGAAGGAGCTTCTGGTGCCCGGTGCGC CGGTGATCGTGACGCTGCAAGGCGACGCGTCTGCGCAGCCAACCCGGCCGTTCGGGGGCCGGAAGACCGCCGGCAGGCTG CTCATGGTCCGTACCGGGTCCACCTGGGTCTCGGTGGATACATCCTTGCCCGGGAAGCTCTTCCACCAGGCGGTGGTCGC GGGGAGCTGCGCTCCCTTCGCCGGGTACACCGAGGTACGTCCCGAGTACCGGTACGGCGGCAGCCGCATCGATTTCCTGC TGACCGCGCCGGACCTGCCCCCGTGCCTGGTGGAGGTGAAGTCCGTCACCTCCGTGCTGCCGGACGCGGACGGCGCCCGC GTGGCGCGGTTCCCGGACGCGCCGACGGCCCGCGGCGCCCGCCACCTGGACGAACTGGCCGGGGCCGTGCGGGAAGGGTA CAGGGCGGCCGTCTGCTTCATCACGCAGCGGGACGACGCCCAGGCCTTCGGCCCGTGGGACGAGATCGATCCGTTCTTCG GTGAAACCCTGCGCAAAGTGGCTCGGGCCGGGGTGGAGATCCGGGCCTTCGTCACGCACGTGACCCCGGAGGGCGCCGTC CTGGGCGGGGAGCTTCCCGTACGGCTGGCGCGGTGA
Upstream 100 bases:
>100_bases TGATTACTTGCAGACACGAAAAGCCTGTAATCTTTAGCATAGGCGAGCCACCCCGAACGGTCAAGGAAAGGCGGTCCACA GGGGTTGGACTCCGCACGTG
Downstream 100 bases:
>100_bases GGACCGGGTGGCCGGCAGGAGATCTGTCCTCGCAAGGCTAAAGGAAAGCACGACCAACATTACGTACTCAAACTATTAAC GTCTCGTGGCATAATGGGAG
Product: sugar fermentation stimulation protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MKGAEPLAELRLRATFLERPNRFVARVRLEDGREVPVHVASSGRMKELLVPGAPVIVTLQGDASAQPTRPFGGRKTAGRL LMVRTGSTWVSVDTSLPGKLFHQAVVAGSCAPFAGYTEVRPEYRYGGSRIDFLLTAPDLPPCLVEVKSVTSVLPDADGAR VARFPDAPTARGARHLDELAGAVREGYRAAVCFITQRDDAQAFGPWDEIDPFFGETLRKVARAGVEIRAFVTHVTPEGAV LGGELPVRLAR
Sequences:
>Translated_251_residues MKGAEPLAELRLRATFLERPNRFVARVRLEDGREVPVHVASSGRMKELLVPGAPVIVTLQGDASAQPTRPFGGRKTAGRL LMVRTGSTWVSVDTSLPGKLFHQAVVAGSCAPFAGYTEVRPEYRYGGSRIDFLLTAPDLPPCLVEVKSVTSVLPDADGAR VARFPDAPTARGARHLDELAGAVREGYRAAVCFITQRDDAQAFGPWDEIDPFFGETLRKVARAGVEIRAFVTHVTPEGAV LGGELPVRLAR >Mature_251_residues MKGAEPLAELRLRATFLERPNRFVARVRLEDGREVPVHVASSGRMKELLVPGAPVIVTLQGDASAQPTRPFGGRKTAGRL LMVRTGSTWVSVDTSLPGKLFHQAVVAGSCAPFAGYTEVRPEYRYGGSRIDFLLTAPDLPPCLVEVKSVTSVLPDADGAR VARFPDAPTARGARHLDELAGAVREGYRAAVCFITQRDDAQAFGPWDEIDPFFGETLRKVARAGVEIRAFVTHVTPEGAV LGGELPVRLAR
Specific function: Probable Regulatory Factor Involved In Maltose Metabolism. [C]
COG id: COG1489
COG function: function code R; DNA-binding protein, stimulates sugar fermentation
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sfsA family
Homologues:
Organism=Escherichia coli, GI1786340, Length=239, Percent_Identity=33.0543933054393, Blast_Score=125, Evalue=3e-30,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): SFSA_SYMTH (Q67QV9)
Other databases:
- EMBL: AP006840 - RefSeq: YP_074778.1 - GeneID: 2980596 - GenomeReviews: AP006840_GR - KEGG: sth:STH949 - NMPDR: fig|292459.1.peg.909 - HOGENOM: HBG655520 - OMA: NTGSMLN - BioCyc: STHE292459:STH949-MONOMER - HAMAP: MF_00095 - InterPro: IPR005224 - TIGRFAMs: TIGR00230
Pfam domain/function: PF03749 SfsA
EC number: NA
Molecular weight: Translated: 27111; Mature: 27111
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGAEPLAELRLRATFLERPNRFVARVRLEDGREVPVHVASSGRMKELLVPGAPVIVTLQ CCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCEEEECCCCCEEEEECCCCCEEEEEE GDASAQPTRPFGGRKTAGRLLMVRTGSTWVSVDTSLPGKLFHQAVVAGSCAPFAGYTEVR CCCCCCCCCCCCCCCCCCEEEEEEECCEEEEECCCCCHHHHHHHHHHCCCCCCCCCHHCC PEYRYGGSRIDFLLTAPDLPPCLVEVKSVTSVLPDADGARVARFPDAPTARGARHLDELA CHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHH GAVREGYRAAVCFITQRDDAQAFGPWDEIDPFFGETLRKVARAGVEIRAFVTHVTPEGAV HHHHCCCEEEEEEEEECCCCCCCCCHHHCCHHHHHHHHHHHHCCCEEEEEEEEECCCCEE LGGELPVRLAR ECCCCCEEECC >Mature Secondary Structure MKGAEPLAELRLRATFLERPNRFVARVRLEDGREVPVHVASSGRMKELLVPGAPVIVTLQ CCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCEEEECCCCCEEEEECCCCCEEEEEE GDASAQPTRPFGGRKTAGRLLMVRTGSTWVSVDTSLPGKLFHQAVVAGSCAPFAGYTEVR CCCCCCCCCCCCCCCCCCEEEEEEECCEEEEECCCCCHHHHHHHHHHCCCCCCCCCHHCC PEYRYGGSRIDFLLTAPDLPPCLVEVKSVTSVLPDADGARVARFPDAPTARGARHLDELA CHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHH GAVREGYRAAVCFITQRDDAQAFGPWDEIDPFFGETLRKVARAGVEIRAFVTHVTPEGAV HHHHCCCEEEEEEEEECCCCCCCCCHHHCCHHHHHHHHHHHHCCCEEEEEEEEECCCCEE LGGELPVRLAR ECCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA