Click here to switch to the map view.

The map label for this gene is trg [C]

Identifier: 51892086

GI number: 51892086

Start: 1062880

End: 1064748

Strand: Reverse

Name: trg [C]

Synonym: STH948

Alternate gene names: 51892086

Gene position: 1064748-1062880 (Counterclockwise)

Preceding gene: 51892087

Following gene: 51892085

Centisome position: 29.86

GC content: 69.77

Gene sequence:

>1869_bases
ATGCGCAGGCAGGTCCGATCCGGAATCGCGTGGAAACTGCTCGCCTCTCCCCTGGTTCTCATCGCGCTCCTGATCGCCGT
GGGCTTCGTCAGCCGGCTCGCGACCCAGACGCTGCTGCGGGAACTCGAAGGCATCGACCGGAGCTACGCGCTGGCCATCG
GGGCCCAGAAGCTCCAGGCCGACCTGCTGCGTGAGGCCACCGGCATCGCCAACTACGTGCTGTACGCCGACTCCCGTGAC
ATCGCCGACTACCAGGCCGCCGGTACACGGGTGCCGGAGACGTTGCAACAGCTGCTGGAGATCGCCGAGGACGAAACGGT
CCGTCAGCAGTTGCTGGACATCCAGGAGAAGCACGGCGCCTACACCGACGCCGTGGACAGGATTCGGAACCACCTGCGCA
GCCAGCGCCAGTCCCAGGCCATCCTCCTCATGCAGACGGAGGCCGTCCCGACCCTCCGGGAGATGACCGCGGCCGTGGAC
AGCCTGGTGGAGTCGCTGACGTCGGGGACTTCGGCCGATCTCACCGGCAGCCGGAACCTGGCGGGCGTCCTGGACGTGGG
CGTGATCGCCGCCTCGTTCGCCGCCGTGGTCCTCGGCCTGGCGGTGGCCCTGGTCATGTCCCGCCGGCTGCTCCGGCCGA
TCCGGAACCTGTCGGAAGCCGCGGCGGCGATCGCGGCCGGCAACCTGTCCGCTCAGGAGGTGACCGTCACCTCGCAGGAT
GAGGTCGGCAACACCATCCGGGCGTTCAACGAGATGGCCCGGAACCTGCACGACGTGCTGCAGCGGGTCAGCCGCAGCGC
CGAGGCGGTGAGAGCGGCCTCGGTCGAGCTGACCGGGTTCGCCCGGTCGTCGGCGGAGGCGGCCGCATCGACCGCCGAGG
CCATCGGCCACGTGGCGTCGGGGGCGTCGCAGCAGGCCCACGAGACCTCCGAGGTCAACATCACGGTCGGGCGGCTGCAG
GAGATCATCGGCTCCATCGCCGAAGGTGCCGCCCGGTCGGCGGAGGACATCCGACAGGCCACGGAACTGCTGAAACACAT
GACCGAAAGCCTGGACCAGATGGCCCAGCGGGTATGGAGTACCGCAGAGCGGGCGGCTCAGGCGATGGAGCAGGCGCGGT
CCGGCGCGGACGTCATCGAGCGGACGCTGGACGAAATGGTGGCCACCGACGAGGTGGTGGCCCACGCAGCAGGGCGCATG
CGGGAGCTGGAGCGGCTCCTGGGCCAGATCGGCACGATCAGTGAGACCATCATGGAGATCGCCGACCAGACCAACCTGCT
GGCCCTGAACGCGGCCATCGAGGCGGCCCGGGCCGGGGATCACGGCCGAGGGTTCGCGGTGGTGGCCGACGAGGTGCGGA
AGCTGGCGGAGCGGTCGTCCACTTCGGCCGAGGAGATCACGACGCTCATCCGGAACATCCAGGAGGGCACGGCGGAGGCC
GTCGCCGCCATGGAAGCGGGGACACAGCGGCTTGCCGCCGGAACCAAGCTGGCAGGCGAGGCCGGCAACTCCCTGGCGGT
GATCCTGGACGCCGTGCACAAGGCCGCGGCGGACATGGACGACGTGGCCGTGGACGTGGAGAAGAGCAAGGCGATGGCCG
GCGAGGTGATGGCCACCTTCCAGGTCGTATCCGAGACGGTCCGGGCCAACAACGAGGCGACCGGGGAGCTGATTGCGGGG
GCGGCGCAGGTGACCGCCGCGGTGGACCGCATCGCCCAGGTATCCCAGGAGAATGCCGCCGTCGCCCAGGAGGTGGCCTC
CTCGGTGGAGGCGATGAACGAATCCGCCGAGCGGGTCGCGGAGGCTGCGCAGCGGCTGGCGGAGACCGCGGAAGAGATGC
GGGAGCAGGTGGGGCGGTTCAGGATCTAA

Upstream 100 bases:

>100_bases
GGAAAGCACGACCAACATTACGTACTCAAACTATTAACGTCTCGTGGCATAATGGGAGAAAAGCATCATCTTGGCATCTC
GGTATCTGGAGGTAGCCCCA

Downstream 100 bases:

>100_bases
CCGGACTGTGCAAAAGGCGGGAACGGCGTACGCTGCCGTTCCCGCCTTCTGCCTTGCCGCACCGGCACTCCCCTCACGGT
ACCTCAGCCCGATGTCGTCA

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 622; Mature: 622

Protein sequence:

>622_residues
MRRQVRSGIAWKLLASPLVLIALLIAVGFVSRLATQTLLRELEGIDRSYALAIGAQKLQADLLREATGIANYVLYADSRD
IADYQAAGTRVPETLQQLLEIAEDETVRQQLLDIQEKHGAYTDAVDRIRNHLRSQRQSQAILLMQTEAVPTLREMTAAVD
SLVESLTSGTSADLTGSRNLAGVLDVGVIAASFAAVVLGLAVALVMSRRLLRPIRNLSEAAAAIAAGNLSAQEVTVTSQD
EVGNTIRAFNEMARNLHDVLQRVSRSAEAVRAASVELTGFARSSAEAAASTAEAIGHVASGASQQAHETSEVNITVGRLQ
EIIGSIAEGAARSAEDIRQATELLKHMTESLDQMAQRVWSTAERAAQAMEQARSGADVIERTLDEMVATDEVVAHAAGRM
RELERLLGQIGTISETIMEIADQTNLLALNAAIEAARAGDHGRGFAVVADEVRKLAERSSTSAEEITTLIRNIQEGTAEA
VAAMEAGTQRLAAGTKLAGEAGNSLAVILDAVHKAAADMDDVAVDVEKSKAMAGEVMATFQVVSETVRANNEATGELIAG
AAQVTAAVDRIAQVSQENAAVAQEVASSVEAMNESAERVAEAAQRLAETAEEMREQVGRFRI

Sequences:

>Translated_622_residues
MRRQVRSGIAWKLLASPLVLIALLIAVGFVSRLATQTLLRELEGIDRSYALAIGAQKLQADLLREATGIANYVLYADSRD
IADYQAAGTRVPETLQQLLEIAEDETVRQQLLDIQEKHGAYTDAVDRIRNHLRSQRQSQAILLMQTEAVPTLREMTAAVD
SLVESLTSGTSADLTGSRNLAGVLDVGVIAASFAAVVLGLAVALVMSRRLLRPIRNLSEAAAAIAAGNLSAQEVTVTSQD
EVGNTIRAFNEMARNLHDVLQRVSRSAEAVRAASVELTGFARSSAEAAASTAEAIGHVASGASQQAHETSEVNITVGRLQ
EIIGSIAEGAARSAEDIRQATELLKHMTESLDQMAQRVWSTAERAAQAMEQARSGADVIERTLDEMVATDEVVAHAAGRM
RELERLLGQIGTISETIMEIADQTNLLALNAAIEAARAGDHGRGFAVVADEVRKLAERSSTSAEEITTLIRNIQEGTAEA
VAAMEAGTQRLAAGTKLAGEAGNSLAVILDAVHKAAADMDDVAVDVEKSKAMAGEVMATFQVVSETVRANNEATGELIAG
AAQVTAAVDRIAQVSQENAAVAQEVASSVEAMNESAERVAEAAQRLAETAEEMREQVGRFRI
>Mature_622_residues
MRRQVRSGIAWKLLASPLVLIALLIAVGFVSRLATQTLLRELEGIDRSYALAIGAQKLQADLLREATGIANYVLYADSRD
IADYQAAGTRVPETLQQLLEIAEDETVRQQLLDIQEKHGAYTDAVDRIRNHLRSQRQSQAILLMQTEAVPTLREMTAAVD
SLVESLTSGTSADLTGSRNLAGVLDVGVIAASFAAVVLGLAVALVMSRRLLRPIRNLSEAAAAIAAGNLSAQEVTVTSQD
EVGNTIRAFNEMARNLHDVLQRVSRSAEAVRAASVELTGFARSSAEAAASTAEAIGHVASGASQQAHETSEVNITVGRLQ
EIIGSIAEGAARSAEDIRQATELLKHMTESLDQMAQRVWSTAERAAQAMEQARSGADVIERTLDEMVATDEVVAHAAGRM
RELERLLGQIGTISETIMEIADQTNLLALNAAIEAARAGDHGRGFAVVADEVRKLAERSSTSAEEITTLIRNIQEGTAEA
VAAMEAGTQRLAAGTKLAGEAGNSLAVILDAVHKAAADMDDVAVDVEKSKAMAGEVMATFQVVSETVRANNEATGELIAG
AAQVTAAVDRIAQVSQENAAVAQEVASSVEAMNESAERVAEAAQRLAETAEEMREQVGRFRI

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=423, Percent_Identity=26.4775413711584, Blast_Score=96, Evalue=6e-21,
Organism=Escherichia coli, GI1789453, Length=416, Percent_Identity=26.6826923076923, Blast_Score=94, Evalue=3e-20,
Organism=Escherichia coli, GI1788195, Length=316, Percent_Identity=30.379746835443, Blast_Score=94, Evalue=3e-20,
Organism=Escherichia coli, GI1788194, Length=251, Percent_Identity=33.8645418326693, Blast_Score=94, Evalue=3e-20,
Organism=Escherichia coli, GI2367378, Length=224, Percent_Identity=35.2678571428571, Blast_Score=89, Evalue=8e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 66024; Mature: 66024

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRQVRSGIAWKLLASPLVLIALLIAVGFVSRLATQTLLRELEGIDRSYALAIGAQKLQA
CCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
DLLREATGIANYVLYADSRDIADYQAAGTRVPETLQQLLEIAEDETVRQQLLDIQEKHGA
HHHHHHHHHHHHEEEECCCCHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCC
YTDAVDRIRNHLRSQRQSQAILLMQTEAVPTLREMTAAVDSLVESLTSGTSADLTGSRNL
HHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
AGVLDVGVIAASFAAVVLGLAVALVMSRRLLRPIRNLSEAAAAIAAGNLSAQEVTVTSQD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHH
EVGNTIRAFNEMARNLHDVLQRVSRSAEAVRAASVELTGFARSSAEAAASTAEAIGHVAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GASQQAHETSEVNITVGRLQEIIGSIAEGAARSAEDIRQATELLKHMTESLDQMAQRVWS
CCCHHHHCCCCCEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TAERAAQAMEQARSGADVIERTLDEMVATDEVVAHAAGRMRELERLLGQIGTISETIMEI
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADQTNLLALNAAIEAARAGDHGRGFAVVADEVRKLAERSSTSAEEITTLIRNIQEGTAEA
HCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
VAAMEAGTQRLAAGTKLAGEAGNSLAVILDAVHKAAADMDDVAVDVEKSKAMAGEVMATF
HHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
QVVSETVRANNEATGELIAGAAQVTAAVDRIAQVSQENAAVAQEVASSVEAMNESAERVA
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAAQRLAETAEEMREQVGRFRI
HHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRRQVRSGIAWKLLASPLVLIALLIAVGFVSRLATQTLLRELEGIDRSYALAIGAQKLQA
CCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
DLLREATGIANYVLYADSRDIADYQAAGTRVPETLQQLLEIAEDETVRQQLLDIQEKHGA
HHHHHHHHHHHHEEEECCCCHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCC
YTDAVDRIRNHLRSQRQSQAILLMQTEAVPTLREMTAAVDSLVESLTSGTSADLTGSRNL
HHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
AGVLDVGVIAASFAAVVLGLAVALVMSRRLLRPIRNLSEAAAAIAAGNLSAQEVTVTSQD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHH
EVGNTIRAFNEMARNLHDVLQRVSRSAEAVRAASVELTGFARSSAEAAASTAEAIGHVAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GASQQAHETSEVNITVGRLQEIIGSIAEGAARSAEDIRQATELLKHMTESLDQMAQRVWS
CCCHHHHCCCCCEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TAERAAQAMEQARSGADVIERTLDEMVATDEVVAHAAGRMRELERLLGQIGTISETIMEI
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADQTNLLALNAAIEAARAGDHGRGFAVVADEVRKLAERSSTSAEEITTLIRNIQEGTAEA
HCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
VAAMEAGTQRLAAGTKLAGEAGNSLAVILDAVHKAAADMDDVAVDVEKSKAMAGEVMATF
HHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
QVVSETVRANNEATGELIAGAAQVTAAVDRIAQVSQENAAVAQEVASSVEAMNESAERVA
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAAQRLAETAEEMREQVGRFRI
HHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA