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The map label for this gene is 51892084

Identifier: 51892084

GI number: 51892084

Start: 1061807

End: 1062232

Strand: Reverse

Name: 51892084

Synonym: STH946

Alternate gene names: NA

Gene position: 1062232-1061807 (Counterclockwise)

Preceding gene: 51892085

Following gene: 51892082

Centisome position: 29.79

GC content: 67.37

Gene sequence:

>426_bases
ATGTACTACCCGATGCGTCAGTGGAACCCGTTCGACCTGTTCGACCGGATGCTTTCCCAGTGGCAGCACGTCCTGGGTAG
CTTCTGGCCTGCCGTACCCTCTCTTCCCTCGCTGGACCAGATGGACGTACAGCAGGGCGACCAGGACGCCGTGATCCGGA
TTGAGGTGCCGGGCATCAGCCCCGAGGACCTGTCCGTAACCGTCGACGGCAACATGCTCACCATCCGCGCCGTTCACCGC
GCCATCCCGATGGGCGGTGAGGAAGGCGGTGCGCAGGGCGTGGCCACCTACCAGCGGTCCTTCACGCTGCCGCCCAGCGT
CGACGCCGACAAGATCACCGCCCGCTACCACCACGGGGTGCTGGAGATCCGGCTGCCGCGGACCCAGGGCCAGGGCGGCC
GGCAGATCCCCATCGACCTGGCGTGA

Upstream 100 bases:

>100_bases
TTGACTTTCTTTGATCTTTGGTGCTAGAATGGTGCTGGCACCGGAGGGAAGGACTCCCACCCCGGGCCCCAACTACACAA
GAGAAAGGGGTATGGCCATG

Downstream 100 bases:

>100_bases
CCCGCCTGCAGATCCCGGATCCCGGACCGCACCGGCCCGCCCCCTCCGCGGGGGCGGGCCGATTTCTATTCCTCCGGCAC
CCGCAGCACCGTCAGGTACC

Product: Hsp20 family heat shock protein

Products: NA

Alternate protein names: Heat Shock Protein; Heat Shock Protein Class I; Small Heat Shock Protein; Hsp20/Alpha Crystallin Family Protein; HSP20 Family Protein; Hsp20 Family Heat Shock Protein; Chaperonin Hsp

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MYYPMRQWNPFDLFDRMLSQWQHVLGSFWPAVPSLPSLDQMDVQQGDQDAVIRIEVPGISPEDLSVTVDGNMLTIRAVHR
AIPMGGEEGGAQGVATYQRSFTLPPSVDADKITARYHHGVLEIRLPRTQGQGGRQIPIDLA

Sequences:

>Translated_141_residues
MYYPMRQWNPFDLFDRMLSQWQHVLGSFWPAVPSLPSLDQMDVQQGDQDAVIRIEVPGISPEDLSVTVDGNMLTIRAVHR
AIPMGGEEGGAQGVATYQRSFTLPPSVDADKITARYHHGVLEIRLPRTQGQGGRQIPIDLA
>Mature_141_residues
MYYPMRQWNPFDLFDRMLSQWQHVLGSFWPAVPSLPSLDQMDVQQGDQDAVIRIEVPGISPEDLSVTVDGNMLTIRAVHR
AIPMGGEEGGAQGVATYQRSFTLPPSVDADKITARYHHGVLEIRLPRTQGQGGRQIPIDLA

Specific function: Unknown

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15725; Mature: 15725

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYYPMRQWNPFDLFDRMLSQWQHVLGSFWPAVPSLPSLDQMDVQQGDQDAVIRIEVPGIS
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCEEEEEECCCC
PEDLSVTVDGNMLTIRAVHRAIPMGGEEGGAQGVATYQRSFTLPPSVDADKITARYHHGV
CCCEEEEECCCEEEEEEHHHHCCCCCCCCCCCCEEEHHHEECCCCCCCHHHHHHEECCCE
LEIRLPRTQGQGGRQIPIDLA
EEEEECCCCCCCCCEECEECC
>Mature Secondary Structure
MYYPMRQWNPFDLFDRMLSQWQHVLGSFWPAVPSLPSLDQMDVQQGDQDAVIRIEVPGIS
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCEEEEEECCCC
PEDLSVTVDGNMLTIRAVHRAIPMGGEEGGAQGVATYQRSFTLPPSVDADKITARYHHGV
CCCEEEEECCCEEEEEEHHHHCCCCCCCCCCCCEEEHHHEECCCCCCCHHHHHHEECCCE
LEIRLPRTQGQGGRQIPIDLA
EEEEECCCCCCCCCEECEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA