| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51892085
Identifier: 51892085
GI number: 51892085
Start: 1062306
End: 1062872
Strand: Reverse
Name: 51892085
Synonym: STH947
Alternate gene names: NA
Gene position: 1062872-1062306 (Counterclockwise)
Preceding gene: 51892086
Following gene: 51892084
Centisome position: 29.8
GC content: 69.14
Gene sequence:
>567_bases GTGCAAAAGGCGGGAACGGCGTACGCTGCCGTTCCCGCCTTCTGCCTTGCCGCACCGGCACTCCCCTCACGGTACCTCAG CCCGATGTCGTCAGCCGTATCGGACCAGCCGCCAGGTGCCGAACTCGTACTGCGGCACCGGCGGGTCGGCGTCGGGTATG GATTGTGGGTCCCCGCCGCTCACCGCCTCCCCGGCAGGGGCTCCCCCTTCGCCCGCGCCGTCGGCAGAAGCGGCCGGGAC GGTCTCCGAACCGGTGGCTTCCCTGTCGGGCGCACCGCCCCGATCCGAAGGGCCCACGCGCAGGGTCTCCAAGGCCCGGG CGCCTTCGTCCGAAACCGCCCCGCCGCCGGCCGGCCTGCTGACTCCGTCCCACGATCTCACCACGATCACGTCGCCGTGG GTCACCATGGGCTGATGTGCGTTCGCCCTTTCCCTGGCCCTCGCCATGCCCGGCTCACCTCCTGGTGCAGTGTATGCCCT TCGGGCTCGGTGCCTTTGCCAAGGGCAAGACCGGCCATTCGTCTTCCGCGCGGATTGACCTTGACTTTCTTTGATCTTTG GTGCTAG
Upstream 100 bases:
>100_bases AACGAATCCGCCGAGCGGGTCGCGGAGGCTGCGCAGCGGCTGGCGGAGACCGCGGAAGAGATGCGGGAGCAGGTGGGGCG GTTCAGGATCTAACCGGACT
Downstream 100 bases:
>100_bases AATGGTGCTGGCACCGGAGGGAAGGACTCCCACCCCGGGCCCCAACTACACAAGAGAAAGGGGTATGGCCATGATGTACT ACCCGATGCGTCAGTGGAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MQKAGTAYAAVPAFCLAAPALPSRYLSPMSSAVSDQPPGAELVLRHRRVGVGYGLWVPAAHRLPGRGSPFARAVGRSGRD GLRTGGFPVGRTAPIRRAHAQGLQGPGAFVRNRPAAGRPADSVPRSHHDHVAVGHHGLMCVRPFPGPRHARLTSWCSVCP SGSVPLPRARPAIRLPRGLTLTFFDLWC
Sequences:
>Translated_188_residues MQKAGTAYAAVPAFCLAAPALPSRYLSPMSSAVSDQPPGAELVLRHRRVGVGYGLWVPAAHRLPGRGSPFARAVGRSGRD GLRTGGFPVGRTAPIRRAHAQGLQGPGAFVRNRPAAGRPADSVPRSHHDHVAVGHHGLMCVRPFPGPRHARLTSWCSVCP SGSVPLPRARPAIRLPRGLTLTFFDLWC >Mature_188_residues MQKAGTAYAAVPAFCLAAPALPSRYLSPMSSAVSDQPPGAELVLRHRRVGVGYGLWVPAAHRLPGRGSPFARAVGRSGRD GLRTGGFPVGRTAPIRRAHAQGLQGPGAFVRNRPAAGRPADSVPRSHHDHVAVGHHGLMCVRPFPGPRHARLTSWCSVCP SGSVPLPRARPAIRLPRGLTLTFFDLWC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19976; Mature: 19976
Theoretical pI: Translated: 12.28; Mature: 12.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKAGTAYAAVPAFCLAAPALPSRYLSPMSSAVSDQPPGAELVLRHRRVGVGYGLWVPAA CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCHH HRLPGRGSPFARAVGRSGRDGLRTGGFPVGRTAPIRRAHAQGLQGPGAFVRNRPAAGRPA HCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHCCCCCCCCC DSVPRSHHDHVAVGHHGLMCVRPFPGPRHARLTSWCSVCPSGSVPLPRARPAIRLPRGLT CCCCCCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCE LTFFDLWC EEEEEECC >Mature Secondary Structure MQKAGTAYAAVPAFCLAAPALPSRYLSPMSSAVSDQPPGAELVLRHRRVGVGYGLWVPAA CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCHH HRLPGRGSPFARAVGRSGRDGLRTGGFPVGRTAPIRRAHAQGLQGPGAFVRNRPAAGRPA HCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHCCCCCCCCC DSVPRSHHDHVAVGHHGLMCVRPFPGPRHARLTSWCSVCPSGSVPLPRARPAIRLPRGLT CCCCCCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCE LTFFDLWC EEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA