| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51892082
Identifier: 51892082
GI number: 51892082
Start: 1059127
End: 1059516
Strand: Reverse
Name: 51892082
Synonym: STH944
Alternate gene names: NA
Gene position: 1059516-1059127 (Counterclockwise)
Preceding gene: 51892084
Following gene: 51892080
Centisome position: 29.71
GC content: 75.9
Gene sequence:
>390_bases GTGCAGCCGATCACGGTGTTCTACGACGGATGGTGCCCGCTCTGCACAGCGGCCCGGCAGCGGCTGGCCCGGCTGGACTG GCTGGGGCGGCTGGAGTTCGTCTCCATCCGGGACCCGGGCGTGGCCGAGCGAGCCGGTGTGGCGCCGGAGCGGCTCGCAG CCCGGCTGCACGTCCACACCCCCCGCACGGGACGCTGGGCGGAGGGCATCTGGGCGGTCGCCGCGATCGCCGCGCGCCTC CCCCTCCTCTGGCCGCTCTGGCCGTTGCTGGCCCTGGCCGGGGTCACCGGGCTGGGGCAGCCCCTCTACGACTTCATCGC CCGTCGGCGGGCGATCGTGCCGGTCGGACAGTGCGACGAGACCGGCTGCCCGCTGCCGGGCCAGGGGTGA
Upstream 100 bases:
>100_bases CGTCTCACTTGGACGACAGCGCGGCCCCACGCGACTGGCCCGCCCCGGCCGGCGCGTTGTACAATGGCAGAAGGGATATC AGTCGAAGGGGTGATGTCGG
Downstream 100 bases:
>100_bases TCGGTAAGGAAAGGTCGCTCAAGCAGACCAACCGACCCTTCCAGACAGAGGGTCGGTTGGTCTTGTCATCGCAGCGGACG CACGACTCGCGCACGACTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 129; Mature: 129
Protein sequence:
>129_residues MQPITVFYDGWCPLCTAARQRLARLDWLGRLEFVSIRDPGVAERAGVAPERLAARLHVHTPRTGRWAEGIWAVAAIAARL PLLWPLWPLLALAGVTGLGQPLYDFIARRRAIVPVGQCDETGCPLPGQG
Sequences:
>Translated_129_residues MQPITVFYDGWCPLCTAARQRLARLDWLGRLEFVSIRDPGVAERAGVAPERLAARLHVHTPRTGRWAEGIWAVAAIAARL PLLWPLWPLLALAGVTGLGQPLYDFIARRRAIVPVGQCDETGCPLPGQG >Mature_129_residues MQPITVFYDGWCPLCTAARQRLARLDWLGRLEFVSIRDPGVAERAGVAPERLAARLHVHTPRTGRWAEGIWAVAAIAARL PLLWPLWPLLALAGVTGLGQPLYDFIARRRAIVPVGQCDETGCPLPGQG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14145; Mature: 14145
Theoretical pI: Translated: 9.04; Mature: 9.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPITVFYDGWCPLCTAARQRLARLDWLGRLEFVSIRDPGVAERAGVAPERLAARLHVHT CCCEEEEECCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHCCCCHHHHHHHHHCCC PRTGRWAEGIWAVAAIAARLPLLWPLWPLLALAGVTGLGQPLYDFIARRRAIVPVGQCDE CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCC TGCPLPGQG CCCCCCCCC >Mature Secondary Structure MQPITVFYDGWCPLCTAARQRLARLDWLGRLEFVSIRDPGVAERAGVAPERLAARLHVHT CCCEEEEECCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHCCCCHHHHHHHHHCCC PRTGRWAEGIWAVAAIAARLPLLWPLWPLLALAGVTGLGQPLYDFIARRRAIVPVGQCDE CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCC TGCPLPGQG CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA