| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51892080
Identifier: 51892080
GI number: 51892080
Start: 1056727
End: 1057497
Strand: Reverse
Name: 51892080
Synonym: STH942
Alternate gene names: NA
Gene position: 1057497-1056727 (Counterclockwise)
Preceding gene: 51892082
Following gene: 51892076
Centisome position: 29.65
GC content: 73.02
Gene sequence:
>771_bases ATGGACATGTCCCTGCCCCCTGATGTCGCCGAACTCATGCAGAGCTTCGCCTCAGGCCTCAGACGGGTGCTCGGCGAGAA GCTGGTGGGCGTCTACCTGGGCGGGTCGGTCTCGCTCGGGGATTACTGCGCCGGGAGCAGCGACCTGGACTTCCTGGTGG TCACCGACGGGCGCCTCTCCCCGGCGGACCTGGACGCCCTGGCGGTCTTCCACCGGGAGTTCCTGACGGCCCACCCCTCC GCAGGCCGGCTGGAGGGGGACTACGCGCCGCGGGAGTGCATCATCCCCGAGGGCACGACGGTCCCGGTGCCCCGGTGCAA GCGGGGAGCCTTCGTGCCGGAGGTGGACCAGGTGATGCTCTCCGCCGACAACATCTGCAACATGCGGGAGAACGGTATCG CCTTCTACGGGCCCCCGCCGGCCGAAGTGCTCCCGCCGGTCAGCCCCGACCAGGTGAGGGCGGCCGTCCGGGCGATGCTG GCGGAGGCGCCGAAGCCCGCGCAGCGGCCCGAGGAGCAGGCGGACGAGCTGCTGGACCTGCTCCGCTCCCTGTGCGCCCT GGAGACGGGAAAACCGACCACCAAGGCGCAGGGCGCCGAATGGGCGCGCCGACACCTGGAGCCCCGATGGCACCCGGTGG TCGACGCGGCGCTGGCGGTCCGCCGCGGGGGCCCGGCGGCGGGCTGGGACGAAGGCATGGCCCGCTCCGCGGCCGAGCTG GACCGGCTCCTGAGGGAGCGGTACGCAATCGCGGCGCAGCCGCCCTCCTGA
Upstream 100 bases:
>100_bases GCGGGCCTCCCCGGCCGCCGGTCGAAACGGGTGGCCGGACCCTCTCCGTCCAATTCGGATGAGCCCCGCCTGGCAACTAC GACATTCAAGGAGGACGTAC
Downstream 100 bases:
>100_bases CCGATCCGGCCGCTAACCCGGAGGCCCTCCCCCGAAGCGCTCCAGCAGAAGCTCTTCCGGCGTCAGGGCCGGCTGGGCGA CGAAGTGCACCACCTGCCAC
Product: putative nucleotidyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MDMSLPPDVAELMQSFASGLRRVLGEKLVGVYLGGSVSLGDYCAGSSDLDFLVVTDGRLSPADLDALAVFHREFLTAHPS AGRLEGDYAPRECIIPEGTTVPVPRCKRGAFVPEVDQVMLSADNICNMRENGIAFYGPPPAEVLPPVSPDQVRAAVRAML AEAPKPAQRPEEQADELLDLLRSLCALETGKPTTKAQGAEWARRHLEPRWHPVVDAALAVRRGGPAAGWDEGMARSAAEL DRLLRERYAIAAQPPS
Sequences:
>Translated_256_residues MDMSLPPDVAELMQSFASGLRRVLGEKLVGVYLGGSVSLGDYCAGSSDLDFLVVTDGRLSPADLDALAVFHREFLTAHPS AGRLEGDYAPRECIIPEGTTVPVPRCKRGAFVPEVDQVMLSADNICNMRENGIAFYGPPPAEVLPPVSPDQVRAAVRAML AEAPKPAQRPEEQADELLDLLRSLCALETGKPTTKAQGAEWARRHLEPRWHPVVDAALAVRRGGPAAGWDEGMARSAAEL DRLLRERYAIAAQPPS >Mature_256_residues MDMSLPPDVAELMQSFASGLRRVLGEKLVGVYLGGSVSLGDYCAGSSDLDFLVVTDGRLSPADLDALAVFHREFLTAHPS AGRLEGDYAPRECIIPEGTTVPVPRCKRGAFVPEVDQVMLSADNICNMRENGIAFYGPPPAEVLPPVSPDQVRAAVRAML AEAPKPAQRPEEQADELLDLLRSLCALETGKPTTKAQGAEWARRHLEPRWHPVVDAALAVRRGGPAAGWDEGMARSAAEL DRLLRERYAIAAQPPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27588; Mature: 27588
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDMSLPPDVAELMQSFASGLRRVLGEKLVGVYLGGSVSLGDYCAGSSDLDFLVVTDGRLS CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCC PADLDALAVFHREFLTAHPSAGRLEGDYAPRECIIPEGTTVPVPRCKRGAFVPEVDQVML HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHH SADNICNMRENGIAFYGPPPAEVLPPVSPDQVRAAVRAMLAEAPKPAQRPEEQADELLDL HHHHHCCHHHCCEEEECCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH LRSLCALETGKPTTKAQGAEWARRHLEPRWHPVVDAALAVRRGGPAAGWDEGMARSAAEL HHHHHHHCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH DRLLRERYAIAAQPPS HHHHHHHHHCCCCCCC >Mature Secondary Structure MDMSLPPDVAELMQSFASGLRRVLGEKLVGVYLGGSVSLGDYCAGSSDLDFLVVTDGRLS CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCC PADLDALAVFHREFLTAHPSAGRLEGDYAPRECIIPEGTTVPVPRCKRGAFVPEVDQVML HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHH SADNICNMRENGIAFYGPPPAEVLPPVSPDQVRAAVRAMLAEAPKPAQRPEEQADELLDL HHHHHCCHHHCCEEEECCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH LRSLCALETGKPTTKAQGAEWARRHLEPRWHPVVDAALAVRRGGPAAGWDEGMARSAAEL HHHHHHHCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH DRLLRERYAIAAQPPS HHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA