| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is yfhP [H]
Identifier: 51891968
GI number: 51891968
Start: 932985
End: 933836
Strand: Reverse
Name: yfhP [H]
Synonym: STH830
Alternate gene names: 51891968
Gene position: 933836-932985 (Counterclockwise)
Preceding gene: 51891969
Following gene: 51891965
Centisome position: 26.19
GC content: 73.36
Gene sequence:
>852_bases GTGGACTCGCTTACCCACGTGCTGATGGGGCACGCGATGGGCGCGCTGGCGACGGCGGTCTCGCCGGAGGCCGGCCCCGC GGTCTACTGGGCAGCGCTGCTGGGCAACTCACTGCCGGACGTCGACGTTCCCCTGAGTTTCCTGCTGCGGCGCGGCATCC AGCTGCACCGCACCTATACCCACACGCTGGTGGGCGCGGCGGCGCTGTCCGCGGCCTCGGCGGGCCTGCTCGCCGCAGCC TTCCCCAGCGCGGGCGCCGGCCCGTTATTCTTCTGGACGCTGCTGGGCAGCCTCGCCCACCTGGCGGTGGACGGCCTCAA CCTGTTCGGCGTCCGCCCGTTCTGGCCCGTGAGCCGCCGAATCGTCGAGCTGGGCGTGCTGCACATCACGGACCCGTGGC TCCTGCTGCTCCTGGGCCTCCCCGCGGTCGGCGCCAAGGCCGGCTGGCTGTCGGCCCGCTGGGTCGGCGCCGCGTTCCTG GCCATGTGGCTCTATGTGGCACAGCGCCATCGCACCGCACGGCGGCTTCTCCACGAGCTCCTGCAGGCCGGCAGCCTGCG GGCACGGGTGGTCCCGTGGTTCAGCGGATGGCGCTACGTGGCGGAGACGGCCCACTCCGTGGAGTTCGGCCGCTGGGCGG GCGGCCGGCGGGTGGCGCTGGAGACCTTCGCCCGGCAGGACGACCCGCGCATCGCGGCCACGCTGGCAGACCCGCGGGTG AGCCAGTTCCTGCGGGAGGCTGAGTATCCCGTGGCCCTGGTGCAGGAGGGCGAAGTGGTCTGGATTGACGCCCTGCGCCG TCTGCGGGCCGACTTCCGACCGCTGCGGGTGCCCGTCCGGGCGGAGGCATAA
Upstream 100 bases:
>100_bases TGGGCCACGTGCTGCCGTCAACCAGGAATTGTGCGTAGCACGGTCAGGCCCACCCCTTCTACAATTGAAACGATCTCCTT TCCCAATCGAGGTGTTGCCG
Downstream 100 bases:
>100_bases AGCAAGCGAGGGGCCCGGTGGCAGGACCACCGGGCCCCGGTATCCGTGGCTCCGCTCACCCAGCCGCCCCTCAGGCGACC TCGACGACCTCGTAGCCCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 283; Mature: 283
Protein sequence:
>283_residues MDSLTHVLMGHAMGALATAVSPEAGPAVYWAALLGNSLPDVDVPLSFLLRRGIQLHRTYTHTLVGAAALSAASAGLLAAA FPSAGAGPLFFWTLLGSLAHLAVDGLNLFGVRPFWPVSRRIVELGVLHITDPWLLLLLGLPAVGAKAGWLSARWVGAAFL AMWLYVAQRHRTARRLLHELLQAGSLRARVVPWFSGWRYVAETAHSVEFGRWAGGRRVALETFARQDDPRIAATLADPRV SQFLREAEYPVALVQEGEVVWIDALRRLRADFRPLRVPVRAEA
Sequences:
>Translated_283_residues MDSLTHVLMGHAMGALATAVSPEAGPAVYWAALLGNSLPDVDVPLSFLLRRGIQLHRTYTHTLVGAAALSAASAGLLAAA FPSAGAGPLFFWTLLGSLAHLAVDGLNLFGVRPFWPVSRRIVELGVLHITDPWLLLLLGLPAVGAKAGWLSARWVGAAFL AMWLYVAQRHRTARRLLHELLQAGSLRARVVPWFSGWRYVAETAHSVEFGRWAGGRRVALETFARQDDPRIAATLADPRV SQFLREAEYPVALVQEGEVVWIDALRRLRADFRPLRVPVRAEA >Mature_283_residues MDSLTHVLMGHAMGALATAVSPEAGPAVYWAALLGNSLPDVDVPLSFLLRRGIQLHRTYTHTLVGAAALSAASAGLLAAA FPSAGAGPLFFWTLLGSLAHLAVDGLNLFGVRPFWPVSRRIVELGVLHITDPWLLLLLGLPAVGAKAGWLSARWVGAAFL AMWLYVAQRHRTARRLLHELLQAGSLRARVVPWFSGWRYVAETAHSVEFGRWAGGRRVALETFARQDDPRIAATLADPRV SQFLREAEYPVALVQEGEVVWIDALRRLRADFRPLRVPVRAEA
Specific function: May act as a negative regulator for the transcription of yfhQ, fabL, sspE and yfhP [H]
COG id: COG1988
COG function: function code R; Predicted membrane-bound metal-dependent hydrolases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007404 [H]
Pfam domain/function: PF04307 DUF457 [H]
EC number: NA
Molecular weight: Translated: 30910; Mature: 30910
Theoretical pI: Translated: 11.03; Mature: 11.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSLTHVLMGHAMGALATAVSPEAGPAVYWAALLGNSLPDVDVPLSFLLRRGIQLHRTYT CCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHCCHHHHHHHH HTLVGAAALSAASAGLLAAAFPSAGAGPLFFWTLLGSLAHLAVDGLNLFGVRPFWPVSRR HHHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHCCCCCCCHHHHH IVELGVLHITDPWLLLLLGLPAVGAKAGWLSARWVGAAFLAMWLYVAQRHRTARRLLHEL HHHHHHHEECCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LQAGSLRARVVPWFSGWRYVAETAHSVEFGRWAGGRRVALETFARQDDPRIAATLADPRV HHCCCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCEEEEECCHHH SQFLREAEYPVALVQEGEVVWIDALRRLRADFRPLRVPVRAEA HHHHHHCCCCEEEECCCCEEEHHHHHHHHHCCCCCCCCEECCC >Mature Secondary Structure MDSLTHVLMGHAMGALATAVSPEAGPAVYWAALLGNSLPDVDVPLSFLLRRGIQLHRTYT CCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHCCHHHHHHHH HTLVGAAALSAASAGLLAAAFPSAGAGPLFFWTLLGSLAHLAVDGLNLFGVRPFWPVSRR HHHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHCCCCCCCHHHHH IVELGVLHITDPWLLLLLGLPAVGAKAGWLSARWVGAAFLAMWLYVAQRHRTARRLLHEL HHHHHHHEECCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LQAGSLRARVVPWFSGWRYVAETAHSVEFGRWAGGRRVALETFARQDDPRIAATLADPRV HHCCCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCEEEEECCHHH SQFLREAEYPVALVQEGEVVWIDALRRLRADFRPLRVPVRAEA HHHHHHCCCCEEEECCCCEEEHHHHHHHHHCCCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8946165; 9384377 [H]