Click here to switch to the map view.

The map label for this gene is yigL [H]

Identifier: 51891965

GI number: 51891965

Start: 930535

End: 931308

Strand: Reverse

Name: yigL [H]

Synonym: STH827

Alternate gene names: 51891965

Gene position: 931308-930535 (Counterclockwise)

Preceding gene: 51891968

Following gene: 51891954

Centisome position: 26.12

GC content: 71.58

Gene sequence:

>774_bases
TTGGACGGAACGCTGCTCCGGTCCGACCAGACCGTCTCCCCGCGCAACCAGGCGGCCGTTGCAGCCTGCCTGGACCGCGG
CATCACGGTGCTCCTCGCGACCGGCCGCTTCTATCCGGCTGCGGCCCCGTACCTGGAGTACTGGCCGGGCCGCCCGATCT
GGCTGGCGCCGTGCAACGGGGCGCAGCTCTTCGCGCCCGGGCAGACGGAGCCCATCACCCAGCGGACGCTCGACCTCGAC
CTGGCCGTTGAGGTGCTGTCGTGGATCGACCGGAGCCGTATCATGGCGAGGGTCTACTTCACGACGCTGGCACTGATCAA
CCGGATGACCGAGCGGACGCTCGCGTTCATGCGCCGGCTGGGCGCGCAGTGCCGGTACGAACCGGCGTTGGCGAGCGCCG
TGACGGAGCCGCCCACAAAGATCGTGCTCATGGGCGACCCCGCCGAAATGCCGGTCGTGGAGGCGGAGGTGCGGTCCCGG
TGGGGCGGCCGGCTGGAGGTCACCAGTTCGGAGCCCGACCTGGTGGAACTCACGGCGCCCGGGGCCACCAAAGGCGAGGT
CGTCCGGGCCCTGGCGGCCCGCCTGGGCATCGACCGGACCCAGGTGGCCGCGATCGGCAACGAGCGCAACGATCTGTCGA
TGATCCACTGGGCCGGCCTGGGCGCCGCCGTGGCCAACGCCCACGAGGCGGTGCTGGCTGCGGTGCCGCGGGTGGTCGCC
CATCACGACGAGGACGGCGTCGGCCAGTTCATCGAGAGCTTCCTGGGGGCGTAG

Upstream 100 bases:

>100_bases
CGCCGGGTTGACCGCCTGTGCCTGCGCCGGCTAGACTGGTTTCGATAAGGAGGAGACATAAACCATGTACCATACCCCCA
TCCGCTTGCTGGCACTGGAC

Downstream 100 bases:

>100_bases
CCCGGCCCCTGGCCAGGACCCCCGGGAAACCGGACGCCCGGCAAAGCGGAAAAAGATGCGCCCGGGCAGGCGGTGCGCCC
GGGCGGGAACAGCCTTATTG

Product: haloacid dehalogenase-like hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MDGTLLRSDQTVSPRNQAAVAACLDRGITVLLATGRFYPAAAPYLEYWPGRPIWLAPCNGAQLFAPGQTEPITQRTLDLD
LAVEVLSWIDRSRIMARVYFTTLALINRMTERTLAFMRRLGAQCRYEPALASAVTEPPTKIVLMGDPAEMPVVEAEVRSR
WGGRLEVTSSEPDLVELTAPGATKGEVVRALAARLGIDRTQVAAIGNERNDLSMIHWAGLGAAVANAHEAVLAAVPRVVA
HHDEDGVGQFIESFLGA

Sequences:

>Translated_257_residues
MDGTLLRSDQTVSPRNQAAVAACLDRGITVLLATGRFYPAAAPYLEYWPGRPIWLAPCNGAQLFAPGQTEPITQRTLDLD
LAVEVLSWIDRSRIMARVYFTTLALINRMTERTLAFMRRLGAQCRYEPALASAVTEPPTKIVLMGDPAEMPVVEAEVRSR
WGGRLEVTSSEPDLVELTAPGATKGEVVRALAARLGIDRTQVAAIGNERNDLSMIHWAGLGAAVANAHEAVLAAVPRVVA
HHDEDGVGQFIESFLGA
>Mature_257_residues
MDGTLLRSDQTVSPRNQAAVAACLDRGITVLLATGRFYPAAAPYLEYWPGRPIWLAPCNGAQLFAPGQTEPITQRTLDLD
LAVEVLSWIDRSRIMARVYFTTLALINRMTERTLAFMRRLGAQCRYEPALASAVTEPPTKIVLMGDPAEMPVVEAEVRSR
WGGRLEVTSSEPDLVELTAPGATKGEVVRALAARLGIDRTQVAAIGNERNDLSMIHWAGLGAAVANAHEAVLAAVPRVVA
HHDEDGVGQFIESFLGA

Specific function: Unknown

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI2367265, Length=268, Percent_Identity=32.4626865671642, Blast_Score=91, Evalue=9e-20,
Organism=Escherichia coli, GI48994981, Length=256, Percent_Identity=27.34375, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI1786982, Length=265, Percent_Identity=23.7735849056604, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023214
- InterPro:   IPR013200
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF08282 Hydrolase_3 [H]

EC number: NA

Molecular weight: Translated: 27812; Mature: 27812

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGTLLRSDQTVSPRNQAAVAACLDRGITVLLATGRFYPAAAPYLEYWPGRPIWLAPCNG
CCCCEECCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHCCCCEEEEEECCC
AQLFAPGQTEPITQRTLDLDLAVEVLSWIDRSRIMARVYFTTLALINRMTERTLAFMRRL
CEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAQCRYEPALASAVTEPPTKIVLMGDPAEMPVVEAEVRSRWGGRLEVTSSEPDLVELTAP
CCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHCCCCEEEEECCCCCEEEEECC
GATKGEVVRALAARLGIDRTQVAAIGNERNDLSMIHWAGLGAAVANAHEAVLAAVPRVVA
CCCHHHHHHHHHHHHCCCHHHHEECCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHH
HHDEDGVGQFIESFLGA
CCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MDGTLLRSDQTVSPRNQAAVAACLDRGITVLLATGRFYPAAAPYLEYWPGRPIWLAPCNG
CCCCEECCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHCCCCEEEEEECCC
AQLFAPGQTEPITQRTLDLDLAVEVLSWIDRSRIMARVYFTTLALINRMTERTLAFMRRL
CEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAQCRYEPALASAVTEPPTKIVLMGDPAEMPVVEAEVRSRWGGRLEVTSSEPDLVELTAP
CCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHCCCCEEEEECCCCCEEEEECC
GATKGEVVRALAARLGIDRTQVAAIGNERNDLSMIHWAGLGAAVANAHEAVLAAVPRVVA
CCCHHHHHHHHHHHHCCCHHHHEECCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHH
HHDEDGVGQFIESFLGA
CCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]