| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is sphX [H]
Identifier: 51891902
GI number: 51891902
Start: 859931
End: 860890
Strand: Reverse
Name: sphX [H]
Synonym: STH764
Alternate gene names: 51891902
Gene position: 860890-859931 (Counterclockwise)
Preceding gene: 51891903
Following gene: 51891901
Centisome position: 24.14
GC content: 66.35
Gene sequence:
>960_bases ATGCTCACCGCCTGCGGAGGCCGGGCGAGCAGCAACCCCGGCAGCCAGCCGGGGGCGGGCAATCCGCCCGCGTCCCATCC GGGCACGAACAACCCGGCGCCCTCCAGCAGCGGCGGATCCGCCGGCACCGAGCTCTCGGGAACGGTTACGCTGGACGGCT CCTCCACGGTGGGTCCCATCTCCATCGCCGTCGCGGAGGAGTTTCGCAAGGTGCATCCCAGGGTCGACGTCCCGGTCGGC ATCTCCGGCTCCTCCGCCGGCATCGGCAAGTTCGTCAAGCGCGAGGTCGACATCGCCAACGCTTCCCGGCCGATCAAGGA GAAGGAGCTCGAAGAGGCCAGGAACAACGGGCTCGACCCCATCGAGCTTCCGGTGGCCTACGACGGCCTGTCGGTCGTGG TCAACAAGGAGAACGACTTCCTGACCTGCATCACCACCGAGCAGCTCCACAAGATCTGGGGGCCTGAGTCTACCGTGACC CGGTGGAACGAGGTGGACCCGAGCTGGCCCGATGCGCCCATCAAGCTCTACGGCCCCGGCACCGCTTCCGGCACCTTCGA GTACTTCAACGAGATGGTCAACGGCAAGGGCGACGCGTCCCGGTCCGACTTCACCGCCTCAGAGGACGACAACGTGCTCG TGCAGGGCGTGGCGGGCGACAAGTACGCGATGGGCTACTTCGGCTACGCCTACTACGCCGAGAACAAGGACACCATGAAG GCCCTGGCCATCGACGCCGGCGACGGCTGCGTCGAGCCGAACGACGACACCATCGCCGCCGGCTCCTACCCCTTCTCCCG TCTGATCTATATCTACCCCTCCAGGCAGGCCCTGGAGCGGCCCGAGGTCAAGGCGTTCGTCACCTTCTATATGGAGAATG CCGGGGAGCTCGCCGCCCAGGTCGGCTACACGCCGCTGCCTGAGGAGATGTACCAGGACAACCTGGCCAAGCTGAAGTAA
Upstream 100 bases:
>100_bases GCTACGGAAGTACTCGGCCAAGAGCCAGCAGAGAAAGGGGATCGACACAGCCATGAAGCGGACTCTGATGACCACCGCTG CCGCTGCGGCCCTGCTCGCC
Downstream 100 bases:
>100_bases ACGGTCTCCCTTTCAGTGGCCGCGAGGTCCCGGGGAAGCGCCCGCTTCTCACCGGGACCTCCGGGCCGTTTCCCAAGTGC GTGACGAATCGTGCGGAGGT
Product: phosphate ABC transporter phosphate-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 319; Mature: 319
Protein sequence:
>319_residues MLTACGGRASSNPGSQPGAGNPPASHPGTNNPAPSSSGGSAGTELSGTVTLDGSSTVGPISIAVAEEFRKVHPRVDVPVG ISGSSAGIGKFVKREVDIANASRPIKEKELEEARNNGLDPIELPVAYDGLSVVVNKENDFLTCITTEQLHKIWGPESTVT RWNEVDPSWPDAPIKLYGPGTASGTFEYFNEMVNGKGDASRSDFTASEDDNVLVQGVAGDKYAMGYFGYAYYAENKDTMK ALAIDAGDGCVEPNDDTIAAGSYPFSRLIYIYPSRQALERPEVKAFVTFYMENAGELAAQVGYTPLPEEMYQDNLAKLK
Sequences:
>Translated_319_residues MLTACGGRASSNPGSQPGAGNPPASHPGTNNPAPSSSGGSAGTELSGTVTLDGSSTVGPISIAVAEEFRKVHPRVDVPVG ISGSSAGIGKFVKREVDIANASRPIKEKELEEARNNGLDPIELPVAYDGLSVVVNKENDFLTCITTEQLHKIWGPESTVT RWNEVDPSWPDAPIKLYGPGTASGTFEYFNEMVNGKGDASRSDFTASEDDNVLVQGVAGDKYAMGYFGYAYYAENKDTMK ALAIDAGDGCVEPNDDTIAAGSYPFSRLIYIYPSRQALERPEVKAFVTFYMENAGELAAQVGYTPLPEEMYQDNLAKLK >Mature_319_residues MLTACGGRASSNPGSQPGAGNPPASHPGTNNPAPSSSGGSAGTELSGTVTLDGSSTVGPISIAVAEEFRKVHPRVDVPVG ISGSSAGIGKFVKREVDIANASRPIKEKELEEARNNGLDPIELPVAYDGLSVVVNKENDFLTCITTEQLHKIWGPESTVT RWNEVDPSWPDAPIKLYGPGTASGTFEYFNEMVNGKGDASRSDFTASEDDNVLVQGVAGDKYAMGYFGYAYYAENKDTMK ALAIDAGDGCVEPNDDTIAAGSYPFSRLIYIYPSRQALERPEVKAFVTFYMENAGELAAQVGYTPLPEEMYQDNLAKLK
Specific function: May be involved in the system for phosphate transport across the cytoplasmic membrane [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Cell inner membrane. Note=Found in the cytoplasmic membrane in a form that is closely associated with the cell wall [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011862 - InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 33949; Mature: 33949
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTACGGRASSNPGSQPGAGNPPASHPGTNNPAPSSSGGSAGTELSGTVTLDGSSTVGPI CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCE SIAVAEEFRKVHPRVDVPVGISGSSAGIGKFVKREVDIANASRPIKEKELEEARNNGLDP EHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCC IELPVAYDGLSVVVNKENDFLTCITTEQLHKIWGPESTVTRWNEVDPSWPDAPIKLYGPG EEEEEEECCEEEEEECCCCEEEEEEHHHHHHHHCCCHHHCCCCCCCCCCCCCCEEEECCC TASGTFEYFNEMVNGKGDASRSDFTASEDDNVLVQGVAGDKYAMGYFGYAYYAENKDTMK CCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEEEEEEECCCCCEE ALAIDAGDGCVEPNDDTIAAGSYPFSRLIYIYPSRQALERPEVKAFVTFYMENAGELAAQ EEEEECCCCCCCCCCCEEEECCCCCEEEEEEECCHHHHCCCCCEEEEEEEHHCHHHHHHH VGYTPLPEEMYQDNLAKLK CCCCCCCHHHHHHHHHHCC >Mature Secondary Structure MLTACGGRASSNPGSQPGAGNPPASHPGTNNPAPSSSGGSAGTELSGTVTLDGSSTVGPI CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCE SIAVAEEFRKVHPRVDVPVGISGSSAGIGKFVKREVDIANASRPIKEKELEEARNNGLDP EHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCC IELPVAYDGLSVVVNKENDFLTCITTEQLHKIWGPESTVTRWNEVDPSWPDAPIKLYGPG EEEEEEECCEEEEEECCCCEEEEEEHHHHHHHHCCCHHHCCCCCCCCCCCCCCEEEECCC TASGTFEYFNEMVNGKGDASRSDFTASEDDNVLVQGVAGDKYAMGYFGYAYYAENKDTMK CCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEEEEEEECCCCCEE ALAIDAGDGCVEPNDDTIAAGSYPFSRLIYIYPSRQALERPEVKAFVTFYMENAGELAAQ EEEEECCCCCCCCCCCEEEECCCCCEEEEEEECCHHHHCCCCCEEEEEEEHHCHHHHHHH VGYTPLPEEMYQDNLAKLK CCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7741855 [H]