| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is yqgH [H]
Identifier: 51891901
GI number: 51891901
Start: 858871
End: 859824
Strand: Reverse
Name: yqgH [H]
Synonym: STH763
Alternate gene names: 51891901
Gene position: 859824-858871 (Counterclockwise)
Preceding gene: 51891902
Following gene: 51891900
Centisome position: 24.11
GC content: 68.34
Gene sequence:
>954_bases ATGTCTGCTACGACAGCGCAGCATCCCCCGGCCTCTGCCGCGGCGGCGCTGGCCCCGGACAGGCGCCGGGCGCGCCAGAT CCGAAAGGAGCGTGCGATCGCGGGGCTCCTCCTGGCCGCCGGGCTGGTCTCCGTGGTGACCACGGTGGGCATCGTCCTCA CCCTCTTCACCGAGACGGTCCAGTTCTTCTCCCTCGTTTCGGTCCGGGAATTCCTGACCGACCGGCTGTGGACCCCCACC TTCAGCCCCGCCCACTTCGGCGTCGCGCCGCTCGTGTCGGGTACCTTCATCATCGCCGGCGGCGCCGCGCTGGTGGCCGT ACCCCTGGGCCTGGGCAGTGCCATTTACCTGAGCGAGTATGCCCCCGACCGGGTGCGGCGCATCCTGAAGCCGCTGCTGG AGCTGCTGGCAGGCATCCCCACCGTGGTGTACGGCTTCTTCGCCCTCACCTTCGTGACGCCCCTCCTGAAGAAGATCATC CCGGACATCGAGGTCTTCAACGCCCTGTCCGCCTTCATCACGGTGGGCATCATGATCACGCCGATGATCTGCTCAATGTC GGAGGACGCCATGCTGGCCGTCCCCCGGTCCCTCCGGGAAGCCGGTTTCGCCCTGGGGGCCACCCGGCTGGAGGTGGCCC TGAAGGTGGTGCTGCCGGCGGCCTTCTCCGGCGTCGTCTCCTCCGTCATCCTGGCCGTCTCCCGGGCCATCGGCGAGACG ATGATCGTGGCCCTCGCCGCGGGCTCCACCCCGAAACTCACCCTGAACCCGCTGGAGTCGATTCAGACGATGACCGGCTA CATCGCCCAGGTGGCGCAGGGCGACCTCGAGATCGGCTCGGCCGCTTACACCTCGATGTACGCCGTCGGCATGGCCCTTT TCCTCATCACGCTGGCGATGAACCTGCTGGCCCGGGCCATCAGCCGCCGCTACCAGGAGGGAGAGCGCGCATGA
Upstream 100 bases:
>100_bases TCCCTTTCAGTGGCCGCGAGGTCCCGGGGAAGCGCCCGCTTCTCACCGGGACCTCCGGGCCGTTTCCCAAGTGCGTGACG AATCGTGCGGAGGTGGCATC
Downstream 100 bases:
>100_bases ACGACATCGCTGCCCGCAGGCGCCGCAGGCGCCGGATGGATGCCGCCTCGCACTGGCTCTTTCTGCTGGCGATCGTCGTC GCCCTGGCCGTGCTGGCCAT
Product: phosphate ABC transporter permease protein
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 317; Mature: 316
Protein sequence:
>317_residues MSATTAQHPPASAAAALAPDRRRARQIRKERAIAGLLLAAGLVSVVTTVGIVLTLFTETVQFFSLVSVREFLTDRLWTPT FSPAHFGVAPLVSGTFIIAGGAALVAVPLGLGSAIYLSEYAPDRVRRILKPLLELLAGIPTVVYGFFALTFVTPLLKKII PDIEVFNALSAFITVGIMITPMICSMSEDAMLAVPRSLREAGFALGATRLEVALKVVLPAAFSGVVSSVILAVSRAIGET MIVALAAGSTPKLTLNPLESIQTMTGYIAQVAQGDLEIGSAAYTSMYAVGMALFLITLAMNLLARAISRRYQEGERA
Sequences:
>Translated_317_residues MSATTAQHPPASAAAALAPDRRRARQIRKERAIAGLLLAAGLVSVVTTVGIVLTLFTETVQFFSLVSVREFLTDRLWTPT FSPAHFGVAPLVSGTFIIAGGAALVAVPLGLGSAIYLSEYAPDRVRRILKPLLELLAGIPTVVYGFFALTFVTPLLKKII PDIEVFNALSAFITVGIMITPMICSMSEDAMLAVPRSLREAGFALGATRLEVALKVVLPAAFSGVVSSVILAVSRAIGET MIVALAAGSTPKLTLNPLESIQTMTGYIAQVAQGDLEIGSAAYTSMYAVGMALFLITLAMNLLARAISRRYQEGERA >Mature_316_residues SATTAQHPPASAAAALAPDRRRARQIRKERAIAGLLLAAGLVSVVTTVGIVLTLFTETVQFFSLVSVREFLTDRLWTPTF SPAHFGVAPLVSGTFIIAGGAALVAVPLGLGSAIYLSEYAPDRVRRILKPLLELLAGIPTVVYGFFALTFVTPLLKKIIP DIEVFNALSAFITVGIMITPMICSMSEDAMLAVPRSLREAGFALGATRLEVALKVVLPAAFSGVVSSVILAVSRAIGETM IVALAAGSTPKLTLNPLESIQTMTGYIAQVAQGDLEIGSAAYTSMYAVGMALFLITLAMNLLARAISRRYQEGERA
Specific function: Part of the binding-protein-dependent transport system yqgGHIJK. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0573
COG function: function code P; ABC-type phosphate transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790164, Length=303, Percent_Identity=28.0528052805281, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI1790163, Length=304, Percent_Identity=25.3289473684211, Blast_Score=88, Evalue=7e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011864 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 33495; Mature: 33364
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSATTAQHPPASAAAALAPDRRRARQIRKERAIAGLLLAAGLVSVVTTVGIVLTLFTETV CCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QFFSLVSVREFLTDRLWTPTFSPAHFGVAPLVSGTFIIAGGAALVAVPLGLGSAIYLSEY HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCEEEECCHHHHHHHHCCCCHHHHHHC APDRVRRILKPLLELLAGIPTVVYGFFALTFVTPLLKKIIPDIEVFNALSAFITVGIMIT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH PMICSMSEDAMLAVPRSLREAGFALGATRLEVALKVVLPAAFSGVVSSVILAVSRAIGET HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MIVALAAGSTPKLTLNPLESIQTMTGYIAQVAQGDLEIGSAAYTSMYAVGMALFLITLAM HHHHEECCCCCCEECCHHHHHHHHHHHHHHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHH NLLARAISRRYQEGERA HHHHHHHHHHHHCCCCC >Mature Secondary Structure SATTAQHPPASAAAALAPDRRRARQIRKERAIAGLLLAAGLVSVVTTVGIVLTLFTETV CCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QFFSLVSVREFLTDRLWTPTFSPAHFGVAPLVSGTFIIAGGAALVAVPLGLGSAIYLSEY HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCEEEECCHHHHHHHHCCCCHHHHHHC APDRVRRILKPLLELLAGIPTVVYGFFALTFVTPLLKKIIPDIEVFNALSAFITVGIMIT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH PMICSMSEDAMLAVPRSLREAGFALGATRLEVALKVVLPAAFSGVVSSVILAVSRAIGET HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MIVALAAGSTPKLTLNPLESIQTMTGYIAQVAQGDLEIGSAAYTSMYAVGMALFLITLAM HHHHEECCCCCCEECCHHHHHHHHHHHHHHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHH NLLARAISRRYQEGERA HHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8760913; 8969508; 9384377 [H]