| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
Click here to switch to the map view.
The map label for this gene is pleC [H]
Identifier: 51891870
GI number: 51891870
Start: 815751
End: 817505
Strand: Reverse
Name: pleC [H]
Synonym: STH732
Alternate gene names: 51891870
Gene position: 817505-815751 (Counterclockwise)
Preceding gene: 51891876
Following gene: 51891869
Centisome position: 22.92
GC content: 68.38
Gene sequence:
>1755_bases ATGTGGCACGAATGGTGCATGTCCCCCTGGTCACTTCGTGCACCCAAGGGGCAGGCTAGCCGCTTTATGGGCAAACATGT CGCGGAGCCGTATGATTTAACCATGAACACCACGGCCCCCGGAGGTGAACCCGTGCACACCAGCATCGCGACCAAGTTCA TGATCGGCGTCACCGCCGCGCTCGTGACCGTTCTGGGCGTCAACCTGGGGCTGGACATCCGGCAACAGCGGGCCCAGGCG GAGGAGGATCTGCGGGAGCAGGCGCGGATGGTCGCGACCCAGGTCATCGCGATGCGGGAGTTCATCGCCCGCAACCAGGA CCGGATCAACCGGGACAGCCACGGCCACTTTGAGTTCAAGTACCTGAACCCGGCTGCCGTCGGCCGGGGCGTCGGCCAGA TCTTCGCCGAGATGTCCGACTACCAGTACAAGCAGACCCGCCTTCAGGTGCGTATGGCCGAGAACATGCCGGACGCCTTC GAGGTGGAGGCCCTTCGCCGGTTTGCCAGCAATCCGGACCTGGCGGAGGTCGTCGGGTACACGGGATCCGGGCAGGACCG GGTGTTCCGCTACATGGTGCCGCTGAAGATGGAGGCCTCCTGCCTGCCGTGTCACGGTCCCCCCGCCGGCGAACCGGACA TCGCCGGCTACCCCAAGGAAGGGCTCCAGGTGGGAGAACTGGCCGGCGCCCTGTCGATCACGATCCCCACCGAGCGGTTC GAGGCCCGGCTCACGCAATCTACCCGCAGCCGGGCGACGGTCATCGTCCTGGCGACCGGGCTCTCACTGGCCCTGATCGG ATTCCTCAACCACCAGCTGGTGGCACGGCCCCTCGCCGCCCTGGCCGGGGTGACCCGGCGCATCGGACAGGGCCGGTGGG AAGTGCCCGAGGAGGAGGTGCGGGACCTCAGGGCCCACCAGGAGACGTCGCCGCTGGTGGACGCCATCCAGGCCATGTCG GATGAGCTGCAGGCGCTCTACCGGAACCTGGAGCGGAAGGTGGCGGAGCGCACCCGCCAGCTGCAGGAAGCCCACGCGGA CCTGGAGGCGCTGCACCGGAGCCAGACAGAGTTTTACTCGGCGATGACCCACGAGTTCCGCACGCCGCTGACGTCCATCA TCGGCTTCAGCCAGCTGCTCCTGAGCCCCGGGGGCGACCCCCTGACGCCCGGCCAGCGGGAGCATTTGAAGGACATCCTG GAGAGCGCGCAGCGGCTGCTGCAGCTGGTGAACGATCTGCTGGACGCCTCCCGCCTGCAGGCCGGCCAGATGCCACTCCG AATCGCCGCCGTCGACCTGGGCGAGGCGGTGCAGGAGGCGCTGGCGGTGGTCCGGCCCCTGGCCCAGCAGCGGGAGATCA CGGTCACCTGCCACATCCCCGCCGATCTGCCGCTGGTGGCGGCCGACGACCTGCGGGTGCTCCAGATCCTGCTGAACCTG CTCAGCAACGCGATCAAGTTCACCCAGGTCGGCGGCGAGGTTGCGCTGACGGCGGAGGCCCGGAGCGACCTGGTGCAGGT ATCGGTCCGGGACAACGGCCCCGGCATTCCGCCCGAGGACCATGAGGTGATCTTCCAGCTGTTCCGCCGGGGATCCGCCC ACGAACGGACCGGCGGGTCCGGTCTGGGCCTCGCTCTGGCCAAGCTCCTGGTGGAGCTGCACGGGGGCCGGATCTGGGTC GAGAGCAGACCGGGATGCGGCTCCACGTTCCACTTCACCCTGCCCGTGCACGGAGGTGAACCGCGGTGTCCGTAG
Upstream 100 bases:
>100_bases CTATGCACGCGCCCATCGACCGCCCGCCGCCGCGGCGGCGGGCTCGCCGCGCGCGCGGCGGGCGCTTCCATATAGGCGCG CTCCGGAAGCAGGCGGCGAA
Downstream 100 bases:
>100_bases CTCGCCGGATTCTGGTGGCCGACGACGACCCGAAGACCCTGAAGGTCCTGGAGCATGCGCTGACCGCCGAGGGGTTCGCG GTGATCAAGGCCAGCGACGG
Product: two-component sensor histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 584; Mature: 584
Protein sequence:
>584_residues MWHEWCMSPWSLRAPKGQASRFMGKHVAEPYDLTMNTTAPGGEPVHTSIATKFMIGVTAALVTVLGVNLGLDIRQQRAQA EEDLREQARMVATQVIAMREFIARNQDRINRDSHGHFEFKYLNPAAVGRGVGQIFAEMSDYQYKQTRLQVRMAENMPDAF EVEALRRFASNPDLAEVVGYTGSGQDRVFRYMVPLKMEASCLPCHGPPAGEPDIAGYPKEGLQVGELAGALSITIPTERF EARLTQSTRSRATVIVLATGLSLALIGFLNHQLVARPLAALAGVTRRIGQGRWEVPEEEVRDLRAHQETSPLVDAIQAMS DELQALYRNLERKVAERTRQLQEAHADLEALHRSQTEFYSAMTHEFRTPLTSIIGFSQLLLSPGGDPLTPGQREHLKDIL ESAQRLLQLVNDLLDASRLQAGQMPLRIAAVDLGEAVQEALAVVRPLAQQREITVTCHIPADLPLVAADDLRVLQILLNL LSNAIKFTQVGGEVALTAEARSDLVQVSVRDNGPGIPPEDHEVIFQLFRRGSAHERTGGSGLGLALAKLLVELHGGRIWV ESRPGCGSTFHFTLPVHGGEPRCP
Sequences:
>Translated_584_residues MWHEWCMSPWSLRAPKGQASRFMGKHVAEPYDLTMNTTAPGGEPVHTSIATKFMIGVTAALVTVLGVNLGLDIRQQRAQA EEDLREQARMVATQVIAMREFIARNQDRINRDSHGHFEFKYLNPAAVGRGVGQIFAEMSDYQYKQTRLQVRMAENMPDAF EVEALRRFASNPDLAEVVGYTGSGQDRVFRYMVPLKMEASCLPCHGPPAGEPDIAGYPKEGLQVGELAGALSITIPTERF EARLTQSTRSRATVIVLATGLSLALIGFLNHQLVARPLAALAGVTRRIGQGRWEVPEEEVRDLRAHQETSPLVDAIQAMS DELQALYRNLERKVAERTRQLQEAHADLEALHRSQTEFYSAMTHEFRTPLTSIIGFSQLLLSPGGDPLTPGQREHLKDIL ESAQRLLQLVNDLLDASRLQAGQMPLRIAAVDLGEAVQEALAVVRPLAQQREITVTCHIPADLPLVAADDLRVLQILLNL LSNAIKFTQVGGEVALTAEARSDLVQVSVRDNGPGIPPEDHEVIFQLFRRGSAHERTGGSGLGLALAKLLVELHGGRIWV ESRPGCGSTFHFTLPVHGGEPRCP >Mature_584_residues MWHEWCMSPWSLRAPKGQASRFMGKHVAEPYDLTMNTTAPGGEPVHTSIATKFMIGVTAALVTVLGVNLGLDIRQQRAQA EEDLREQARMVATQVIAMREFIARNQDRINRDSHGHFEFKYLNPAAVGRGVGQIFAEMSDYQYKQTRLQVRMAENMPDAF EVEALRRFASNPDLAEVVGYTGSGQDRVFRYMVPLKMEASCLPCHGPPAGEPDIAGYPKEGLQVGELAGALSITIPTERF EARLTQSTRSRATVIVLATGLSLALIGFLNHQLVARPLAALAGVTRRIGQGRWEVPEEEVRDLRAHQETSPLVDAIQAMS DELQALYRNLERKVAERTRQLQEAHADLEALHRSQTEFYSAMTHEFRTPLTSIIGFSQLLLSPGGDPLTPGQREHLKDIL ESAQRLLQLVNDLLDASRLQAGQMPLRIAAVDLGEAVQEALAVVRPLAQQREITVTCHIPADLPLVAADDLRVLQILLNL LSNAIKFTQVGGEVALTAEARSDLVQVSVRDNGPGIPPEDHEVIFQLFRRGSAHERTGGSGLGLALAKLLVELHGGRIWV ESRPGCGSTFHFTLPVHGGEPRCP
Specific function: Member of the two-component regulatory system involved in the regulation of polar organelle development. PleC functions as a membrane-associated protein kinase that transfers phosphate to the response regulator pleD, leading to its activation [H]
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
Organism=Escherichia coli, GI1789149, Length=353, Percent_Identity=32.2946175637394, Blast_Score=158, Evalue=8e-40, Organism=Escherichia coli, GI87081816, Length=412, Percent_Identity=29.126213592233, Blast_Score=132, Evalue=5e-32, Organism=Escherichia coli, GI145693157, Length=247, Percent_Identity=33.6032388663968, Blast_Score=128, Evalue=1e-30, Organism=Escherichia coli, GI1786912, Length=267, Percent_Identity=32.2097378277154, Blast_Score=127, Evalue=1e-30, Organism=Escherichia coli, GI1788713, Length=231, Percent_Identity=33.3333333333333, Blast_Score=124, Evalue=2e-29, Organism=Escherichia coli, GI48994928, Length=251, Percent_Identity=34.6613545816733, Blast_Score=122, Evalue=8e-29, Organism=Escherichia coli, GI1790436, Length=244, Percent_Identity=33.1967213114754, Blast_Score=104, Evalue=1e-23, Organism=Escherichia coli, GI1788549, Length=222, Percent_Identity=31.981981981982, Blast_Score=104, Evalue=2e-23, Organism=Escherichia coli, GI1786600, Length=255, Percent_Identity=31.3725490196078, Blast_Score=99, Evalue=6e-22, Organism=Escherichia coli, GI1788393, Length=248, Percent_Identity=28.6290322580645, Blast_Score=97, Evalue=3e-21, Organism=Escherichia coli, GI87082128, Length=250, Percent_Identity=31.2, Blast_Score=93, Evalue=5e-20, Organism=Escherichia coli, GI1790346, Length=232, Percent_Identity=30.1724137931034, Blast_Score=91, Evalue=2e-19, Organism=Escherichia coli, GI1786783, Length=234, Percent_Identity=31.6239316239316, Blast_Score=90, Evalue=4e-19, Organism=Escherichia coli, GI1790300, Length=241, Percent_Identity=30.7053941908714, Blast_Score=82, Evalue=7e-17, Organism=Escherichia coli, GI1787894, Length=241, Percent_Identity=28.6307053941909, Blast_Score=78, Evalue=2e-15, Organism=Escherichia coli, GI1788279, Length=272, Percent_Identity=24.6323529411765, Blast_Score=77, Evalue=4e-15, Organism=Escherichia coli, GI1790861, Length=230, Percent_Identity=33.0434782608696, Blast_Score=73, Evalue=6e-14, Organism=Escherichia coli, GI1789808, Length=244, Percent_Identity=25, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI1789403, Length=218, Percent_Identity=28.8990825688073, Blast_Score=65, Evalue=8e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR000014 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 64286; Mature: 64286
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWHEWCMSPWSLRAPKGQASRFMGKHVAEPYDLTMNTTAPGGEPVHTSIATKFMIGVTAA CCHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHH LVTVLGVNLGLDIRQQRAQAEEDLREQARMVATQVIAMREFIARNQDRINRDSHGHFEFK HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCEEEE YLNPAAVGRGVGQIFAEMSDYQYKQTRLQVRMAENMPDAFEVEALRRFASNPDLAEVVGY EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHCC TGSGQDRVFRYMVPLKMEASCLPCHGPPAGEPDIAGYPKEGLQVGELAGALSITIPTERF CCCCHHHHEEEECCCEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCEEEEEECHHHH EARLTQSTRSRATVIVLATGLSLALIGFLNHQLVARPLAALAGVTRRIGQGRWEVPEEEV HHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH RDLRAHQETSPLVDAIQAMSDELQALYRNLERKVAERTRQLQEAHADLEALHRSQTEFYS HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMTHEFRTPLTSIIGFSQLLLSPGGDPLTPGQREHLKDILESAQRLLQLVNDLLDASRLQ HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGQMPLRIAAVDLGEAVQEALAVVRPLAQQREITVTCHIPADLPLVAADDLRVLQILLNL CCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEECCHHHHHHHHHHH LSNAIKFTQVGGEVALTAEARSDLVQVSVRDNGPGIPPEDHEVIFQLFRRGSAHERTGGS HHHHHHHHCCCCCEEEEEHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCC GLGLALAKLLVELHGGRIWVESRPGCGSTFHFTLPVHGGEPRCP HHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEEEECCCCCCCC >Mature Secondary Structure MWHEWCMSPWSLRAPKGQASRFMGKHVAEPYDLTMNTTAPGGEPVHTSIATKFMIGVTAA CCHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHH LVTVLGVNLGLDIRQQRAQAEEDLREQARMVATQVIAMREFIARNQDRINRDSHGHFEFK HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCEEEE YLNPAAVGRGVGQIFAEMSDYQYKQTRLQVRMAENMPDAFEVEALRRFASNPDLAEVVGY EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHCC TGSGQDRVFRYMVPLKMEASCLPCHGPPAGEPDIAGYPKEGLQVGELAGALSITIPTERF CCCCHHHHEEEECCCEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCEEEEEECHHHH EARLTQSTRSRATVIVLATGLSLALIGFLNHQLVARPLAALAGVTRRIGQGRWEVPEEEV HHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH RDLRAHQETSPLVDAIQAMSDELQALYRNLERKVAERTRQLQEAHADLEALHRSQTEFYS HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMTHEFRTPLTSIIGFSQLLLSPGGDPLTPGQREHLKDILESAQRLLQLVNDLLDASRLQ HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGQMPLRIAAVDLGEAVQEALAVVRPLAQQREITVTCHIPADLPLVAADDLRVLQILLNL CCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEECCHHHHHHHHHHH LSNAIKFTQVGGEVALTAEARSDLVQVSVRDNGPGIPPEDHEVIFQLFRRGSAHERTGGS HHHHHHHHCCCCCEEEEEHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCC GLGLALAKLLVELHGGRIWVESRPGCGSTFHFTLPVHGGEPRCP HHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8421698; 11259647 [H]