| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51891859
Identifier: 51891859
GI number: 51891859
Start: 800656
End: 801435
Strand: Reverse
Name: 51891859
Synonym: STH721
Alternate gene names: NA
Gene position: 801435-800656 (Counterclockwise)
Preceding gene: 51891864
Following gene: 51891856
Centisome position: 22.47
GC content: 69.1
Gene sequence:
>780_bases ATGGCGGACTTCCCCGGGGAGTACAGCGTGGCGCTGGAGGACCTCCTCACCGGGCAGCGCTGGCTCCACAACGCAGACCG GCTTTACCACCCGGCCAGCACGGTGAAGGTGCCCGTGGCCCTCTACGCGCTGGAACAGTACCGGGCTGGGAAGATCGGAT GGGGGGATCTCATCGAGTACACCGAGGCCGACGTGGAACCGCCCCTGACCGGGGCGTTTGAGGCGGCCGAGTTCGGCGAC CTGTACCCCGTCCAGGACCTGGTCCACTGGGCCCTGGCCTACAGCGACAACGTGGCCGTCAACATGCTGGGCCGCCGCCT GGGATGGGGGAACATTGAACGCTGGACGGAGACCATCGGGGGGCGGCTGACCCACGAGGACCGGCTGCCGCGGGCCAGCG CCCTGAGCGTCCTTCAATGGTGGCGGCACCTGCACGTGTTGTCCCTGGAGGATCCCGAGCGCGCGAGCCTGATCGTCCGG CCGCTGCTGGCGGCGACGTATCGGGGGCGGATCACCGCCGGCCTGCCGGACGGCGTGCCTCACATGCACAAGCACGGCTC CTACGAGGGCAGCTACCACGATTCGGCCATCGTATACGCCACCCGGCCGTACATCCTGGTCGTGCTCACGGAGGGCGCGC CGCTGGAGGAAGCCGACGCGGCCATCGCCCGGCTCTCTGCGGAGATCTACCGGGTGATGACCGCGTCGCACTCGACCCCT TTGGTCCCGGTCTGGTCGGCGGATGCGCTCCAGACGTTCGTGGGGCCGAGGAAGGAGTAG
Upstream 100 bases:
>100_bases CGCCCCCGAGCTGCCGACGATGCAAGAGCGCGATCCGCTTCCCACCGTCTACGCCAGCCCGATCCCGCCGTCACACATCG CCGAGGCGGTGAGCCGGGCG
Downstream 100 bases:
>100_bases CCGGGCGGGTGGGGCGCGGACGGACCCTTTACGCGGACTTTGGGCGAATGGCCTCAACGATCATGGCGATCCCCTGCCCC ACCCCGATGCACATGGTGGC
Product: putative beta-lactamase
Products: NA
Alternate protein names: Beta-Lactamase Class A-Like Protein; Beta-Lactamase Protein
Number of amino acids: Translated: 259; Mature: 258
Protein sequence:
>259_residues MADFPGEYSVALEDLLTGQRWLHNADRLYHPASTVKVPVALYALEQYRAGKIGWGDLIEYTEADVEPPLTGAFEAAEFGD LYPVQDLVHWALAYSDNVAVNMLGRRLGWGNIERWTETIGGRLTHEDRLPRASALSVLQWWRHLHVLSLEDPERASLIVR PLLAATYRGRITAGLPDGVPHMHKHGSYEGSYHDSAIVYATRPYILVVLTEGAPLEEADAAIARLSAEIYRVMTASHSTP LVPVWSADALQTFVGPRKE
Sequences:
>Translated_259_residues MADFPGEYSVALEDLLTGQRWLHNADRLYHPASTVKVPVALYALEQYRAGKIGWGDLIEYTEADVEPPLTGAFEAAEFGD LYPVQDLVHWALAYSDNVAVNMLGRRLGWGNIERWTETIGGRLTHEDRLPRASALSVLQWWRHLHVLSLEDPERASLIVR PLLAATYRGRITAGLPDGVPHMHKHGSYEGSYHDSAIVYATRPYILVVLTEGAPLEEADAAIARLSAEIYRVMTASHSTP LVPVWSADALQTFVGPRKE >Mature_258_residues ADFPGEYSVALEDLLTGQRWLHNADRLYHPASTVKVPVALYALEQYRAGKIGWGDLIEYTEADVEPPLTGAFEAAEFGDL YPVQDLVHWALAYSDNVAVNMLGRRLGWGNIERWTETIGGRLTHEDRLPRASALSVLQWWRHLHVLSLEDPERASLIVRP LLAATYRGRITAGLPDGVPHMHKHGSYEGSYHDSAIVYATRPYILVVLTEGAPLEEADAAIARLSAEIYRVMTASHSTPL VPVWSADALQTFVGPRKE
Specific function: Unknown
COG id: COG2367
COG function: function code V; Beta-lactamase class A
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28835; Mature: 28704
Theoretical pI: Translated: 5.52; Mature: 5.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADFPGEYSVALEDLLTGQRWLHNADRLYHPASTVKVPVALYALEQYRAGKIGWGDLIEY CCCCCCCHHHHHHHHHHHHHHHHCHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHH TEADVEPPLTGAFEAAEFGDLYPVQDLVHWALAYSDNVAVNMLGRRLGWGNIERWTETIG HHCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHC GRLTHEDRLPRASALSVLQWWRHLHVLSLEDPERASLIVRPLLAATYRGRITAGLPDGVP CCCCCHHCCCHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHCCEEEECCCCCCC HMHKHGSYEGSYHDSAIVYATRPYILVVLTEGAPLEEADAAIARLSAEIYRVMTASHSTP HHHHCCCCCCCCCCCEEEEEECCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCC LVPVWSADALQTFVGPRKE EEEECCHHHHHHHCCCCCC >Mature Secondary Structure ADFPGEYSVALEDLLTGQRWLHNADRLYHPASTVKVPVALYALEQYRAGKIGWGDLIEY CCCCCCHHHHHHHHHHHHHHHHCHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHH TEADVEPPLTGAFEAAEFGDLYPVQDLVHWALAYSDNVAVNMLGRRLGWGNIERWTETIG HHCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHC GRLTHEDRLPRASALSVLQWWRHLHVLSLEDPERASLIVRPLLAATYRGRITAGLPDGVP CCCCCHHCCCHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHCCEEEECCCCCCC HMHKHGSYEGSYHDSAIVYATRPYILVVLTEGAPLEEADAAIARLSAEIYRVMTASHSTP HHHHCCCCCCCCCCCEEEEEECCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCC LVPVWSADALQTFVGPRKE EEEECCHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA