| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is sugE [H]
Identifier: 51891864
GI number: 51891864
Start: 808448
End: 808768
Strand: Reverse
Name: sugE [H]
Synonym: STH726
Alternate gene names: 51891864
Gene position: 808768-808448 (Counterclockwise)
Preceding gene: 51891865
Following gene: 51891859
Centisome position: 22.68
GC content: 65.42
Gene sequence:
>321_bases GTGGCTTGGCTGTACTTGTTCGTGGCAGGTGCCATGGAAATCGCCTGGTCGACGGCGATGAAATACTCCGAGGGTTTCAC CCGGTTCTGGCCCTCCGTGGCGACGATCGTGCTCAGCCTGACCAGCTTCGTCCTGCTCAGCCAGGCGATGAAGACGCTGC CGCTGGGCACCGCCTACGGCGTCTGGACGGGCATCGGCGCCCTCGGCTCCGCGCTGGTGGGCATCGTCTTCCTGGGAGAG CCGCGGGAGCCGTTGCGGCTGCTCTGCATCTTCCTCATCTTCGCCGGCATCGTGGGCCTGAAGCTCACGAGCCGGTCATG A
Upstream 100 bases:
>100_bases AGGAGTCACGATGGTGAGTCTCCCGGGCTTCTCGCTTGCGGCCGGGCACGGCCGGGGGCGACGCGCCCTTGACCACCGGA AACATGGAGGATGGGTAGCA
Downstream 100 bases:
>100_bases CGCCGGGAACGCCTCCACCACCGCGGCGATCCCCTGACCGCCGCCGATGCACAGCGTGGCCAGCCCGTACCGGCCGCCCC GGCGGCGCAGTTCCAGCAGC
Product: putative molecular chaperone
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 106; Mature: 105
Protein sequence:
>106_residues MAWLYLFVAGAMEIAWSTAMKYSEGFTRFWPSVATIVLSLTSFVLLSQAMKTLPLGTAYGVWTGIGALGSALVGIVFLGE PREPLRLLCIFLIFAGIVGLKLTSRS
Sequences:
>Translated_106_residues MAWLYLFVAGAMEIAWSTAMKYSEGFTRFWPSVATIVLSLTSFVLLSQAMKTLPLGTAYGVWTGIGALGSALVGIVFLGE PREPLRLLCIFLIFAGIVGLKLTSRS >Mature_105_residues AWLYLFVAGAMEIAWSTAMKYSEGFTRFWPSVATIVLSLTSFVLLSQAMKTLPLGTAYGVWTGIGALGSALVGIVFLGEP REPLRLLCIFLIFAGIVGLKLTSRS
Specific function: Quaternary ammonium compound efflux pump. Confers resistance to cetylpyridinium, cetyldimethylethyl ammonium and cetrimide cations [H]
COG id: COG2076
COG function: function code P; Membrane transporters of cations and cationic drugs
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the small multidrug resistance (SMR) protein family. SugE (TC 2.A.7.1.4) subfamily [H]
Homologues:
Organism=Escherichia coli, GI87082378, Length=105, Percent_Identity=51.4285714285714, Blast_Score=115, Evalue=4e-28, Organism=Escherichia coli, GI1786755, Length=104, Percent_Identity=40.3846153846154, Blast_Score=77, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000390 [H]
Pfam domain/function: PF00893 Multi_Drug_Res [H]
EC number: NA
Molecular weight: Translated: 11464; Mature: 11333
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAWLYLFVAGAMEIAWSTAMKYSEGFTRFWPSVATIVLSLTSFVLLSQAMKTLPLGTAYG CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH VWTGIGALGSALVGIVFLGEPREPLRLLCIFLIFAGIVGLKLTSRS HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure AWLYLFVAGAMEIAWSTAMKYSEGFTRFWPSVATIVLSLTSFVLLSQAMKTLPLGTAYG HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH VWTGIGALGSALVGIVFLGEPREPLRLLCIFLIFAGIVGLKLTSRS HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA