Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51891855

Identifier: 51891855

GI number: 51891855

Start: 790023

End: 791768

Strand: Reverse

Name: 51891855

Synonym: STH717

Alternate gene names: NA

Gene position: 791768-790023 (Counterclockwise)

Preceding gene: 51891856

Following gene: 51891854

Centisome position: 22.2

GC content: 70.56

Gene sequence:

>1746_bases
ATGTTACACTTCCTCCAGGTCCGCATTTCTGGAGGGAGGACAAAGGGAATGAAGCGCCGCGTCCTGCGCCAGCTGCAGTC
GCTGCTGGCTGTGCTGCTCTCCGTGGCGGGGCTGGTGGTGGCAGCCATGCCGGCGTTCGCCCGCGAGCCGGAAACGTCGG
CTGCCTGGCTCCTGGCCATGGAGGCAGAAGAGTTGCTATGGGAAAAGGCCGGTGGGCCCGAGTGCCGCAACACCACCTAC
CAGGTGACGATCCCGCAGCTGACGGAGGATCGCGTCTATCCGCTGCCGATCGAGTGTCCCGATCTGCAGAACCTGGCCCC
GGGCGACTCAGGTCCGGTCGGGACCTATCGCGTGATCAACGGTGGCACCGCCGCCCTTCGGCTGCAACTGCGGGGCAGGG
TGGAGGGCGTGCTCTTCTCGGGATCCGTTCCCGTGATGCTGACCATACAGGACGACACGGGCCGGACTTACGCGTACGAC
GCCGCCTACCACGACATGCCCGACCTGCCCGCGGGTGAAACCCGCACGATCACGGTCACCTACGCCTGGCCCTTTACAGC
CGAGAATGTCTACCAGGGCGAGCTCGGCAAGATCTTCATCGACCTGCTCGCGAAGGGCACGGGCGACCCGGGCGGCGGAG
GCCCGGGCGGTGGCGGTGGCGGTGGCGGCGGTGGCGGTGGTGGCGGTGGAAGCCCCCCGCCGGACCGGCCGCCGACGCCT
GAAACAGAGTCCGTTGCGCCGGCTTCCGGCCGGATCATTGTCCGGGTGCTCGGCGATCCCGCCGGCAACGGCGACCTGAT
GCCCCTGGAGGGCGCCGAGGTCCAGCTCGCGGACCTGTCGGCCGCGACCGACCCGCTGGGCCAGGTGGTCTTCGACGGCC
TGCCTTTCGGTGCCTACACGGCGCTGGCGACAGCCGTCAACCCGCTGACCGGGGCCGACCCGCTGAGCGGAACCGGCGCC
GCGCAGATCATCGCGGAACAGCCCGAGGCCACCATCACCATCGTGCTCACGTGGCCGCCCCGCCCGCTTCCCCCTCCGCA
GGAGGCACAGCCTGAACCGGAGACCCCGACCGGCTCGCTCACGGTGCGGGTGGTGGACGCCAGTTCGCGCAACGGCGGGC
GCGAGGTGCCCATTGCGGGGGCCATCGTCATCGTCGGAGACCGGGCCGGTTACACGGATCGGGCAGGGGAACTGCACCTG
ACGGAGCTCCCCCTGGGTGACTACACCGTGTATGCGGAGTCCGGGGATCCCACGGATCCCGAGGGCCCGATCCGGAGCGG
CCAGACCCGGGTGCGGCTGACGGAGGAGGAGCCTCACCGGGTGGTCGTCATCCGGCTGATGTGGGAGCAGACGGAACCCG
TCTTCGACGTCGCCCCCGGCAGCATCGCCGGCCGGATCTGCGCACCGCGCACGGGCGCGGCCCGGGTATGGGCGACCCGC
GAGTCCGGGGAGACGGTCGGCACCGCCGTGGCCGCCACCGGCCGGATCGGCATCTGGCTGGACTACACCCTCTCCGACCT
GGCCCCCGGCGTCTGGACCCTCACCCTGCAGAACCCCGGCGATCGTCCGGTGTCCCAGCAGGTAATCGTCCAGCCCGGCC
AGGTGACCCTGGCCCGTGACTTCACCCTGGCCTGCACCGGCGACGGCCTGACCCCGCCACCCCACCTCGGCTACTACGTC
GCAGGCGGCCTGCTGCTCGCGTCGGGCTGGCTGCTGCGCAGGATGGGCAGAAAGGCGATGGCATGA

Upstream 100 bases:

>100_bases
CTCCTCGGCCCGCCCCGGGCTCACCCTTGGCATCACCCGCGCGGGCGAGAATCAGCCGACGAAACCATCCGCAGATTCAC
CCAGTTCACAACGGCGCATG

Downstream 100 bases:

>100_bases
TACGATAGCACTGCCGTCTCTCGTGCGGCCCACACTCATACCGTTTGGAGGGCGAATCGTTGCTTCAGAAGCTGCAGCTG
GTGGCGCGGGAAGGCAGTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 581; Mature: 581

Protein sequence:

>581_residues
MLHFLQVRISGGRTKGMKRRVLRQLQSLLAVLLSVAGLVVAAMPAFAREPETSAAWLLAMEAEELLWEKAGGPECRNTTY
QVTIPQLTEDRVYPLPIECPDLQNLAPGDSGPVGTYRVINGGTAALRLQLRGRVEGVLFSGSVPVMLTIQDDTGRTYAYD
AAYHDMPDLPAGETRTITVTYAWPFTAENVYQGELGKIFIDLLAKGTGDPGGGGPGGGGGGGGGGGGGGGSPPPDRPPTP
ETESVAPASGRIIVRVLGDPAGNGDLMPLEGAEVQLADLSAATDPLGQVVFDGLPFGAYTALATAVNPLTGADPLSGTGA
AQIIAEQPEATITIVLTWPPRPLPPPQEAQPEPETPTGSLTVRVVDASSRNGGREVPIAGAIVIVGDRAGYTDRAGELHL
TELPLGDYTVYAESGDPTDPEGPIRSGQTRVRLTEEEPHRVVVIRLMWEQTEPVFDVAPGSIAGRICAPRTGAARVWATR
ESGETVGTAVAATGRIGIWLDYTLSDLAPGVWTLTLQNPGDRPVSQQVIVQPGQVTLARDFTLACTGDGLTPPPHLGYYV
AGGLLLASGWLLRRMGRKAMA

Sequences:

>Translated_581_residues
MLHFLQVRISGGRTKGMKRRVLRQLQSLLAVLLSVAGLVVAAMPAFAREPETSAAWLLAMEAEELLWEKAGGPECRNTTY
QVTIPQLTEDRVYPLPIECPDLQNLAPGDSGPVGTYRVINGGTAALRLQLRGRVEGVLFSGSVPVMLTIQDDTGRTYAYD
AAYHDMPDLPAGETRTITVTYAWPFTAENVYQGELGKIFIDLLAKGTGDPGGGGPGGGGGGGGGGGGGGGSPPPDRPPTP
ETESVAPASGRIIVRVLGDPAGNGDLMPLEGAEVQLADLSAATDPLGQVVFDGLPFGAYTALATAVNPLTGADPLSGTGA
AQIIAEQPEATITIVLTWPPRPLPPPQEAQPEPETPTGSLTVRVVDASSRNGGREVPIAGAIVIVGDRAGYTDRAGELHL
TELPLGDYTVYAESGDPTDPEGPIRSGQTRVRLTEEEPHRVVVIRLMWEQTEPVFDVAPGSIAGRICAPRTGAARVWATR
ESGETVGTAVAATGRIGIWLDYTLSDLAPGVWTLTLQNPGDRPVSQQVIVQPGQVTLARDFTLACTGDGLTPPPHLGYYV
AGGLLLASGWLLRRMGRKAMA
>Mature_581_residues
MLHFLQVRISGGRTKGMKRRVLRQLQSLLAVLLSVAGLVVAAMPAFAREPETSAAWLLAMEAEELLWEKAGGPECRNTTY
QVTIPQLTEDRVYPLPIECPDLQNLAPGDSGPVGTYRVINGGTAALRLQLRGRVEGVLFSGSVPVMLTIQDDTGRTYAYD
AAYHDMPDLPAGETRTITVTYAWPFTAENVYQGELGKIFIDLLAKGTGDPGGGGPGGGGGGGGGGGGGGGSPPPDRPPTP
ETESVAPASGRIIVRVLGDPAGNGDLMPLEGAEVQLADLSAATDPLGQVVFDGLPFGAYTALATAVNPLTGADPLSGTGA
AQIIAEQPEATITIVLTWPPRPLPPPQEAQPEPETPTGSLTVRVVDASSRNGGREVPIAGAIVIVGDRAGYTDRAGELHL
TELPLGDYTVYAESGDPTDPEGPIRSGQTRVRLTEEEPHRVVVIRLMWEQTEPVFDVAPGSIAGRICAPRTGAARVWATR
ESGETVGTAVAATGRIGIWLDYTLSDLAPGVWTLTLQNPGDRPVSQQVIVQPGQVTLARDFTLACTGDGLTPPPHLGYYV
AGGLLLASGWLLRRMGRKAMA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60822; Mature: 60822

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHFLQVRISGGRTKGMKRRVLRQLQSLLAVLLSVAGLVVAAMPAFAREPETSAAWLLAM
CEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEE
EAEELLWEKAGGPECRNTTYQVTIPQLTEDRVYPLPIECPDLQNLAPGDSGPVGTYRVIN
CHHHHHHHCCCCCCCCCCEEEEECCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEEE
GGTAALRLQLRGRVEGVLFSGSVPVMLTIQDDTGRTYAYDAAYHDMPDLPAGETRTITVT
CCCEEEEEEEECCEEEEEEECCCCEEEEEECCCCCEEEEECHHCCCCCCCCCCEEEEEEE
YAWPFTAENVYQGELGKIFIDLLAKGTGDPGGGGPGGGGGGGGGGGGGGGSPPPDRPPTP
EECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ETESVAPASGRIIVRVLGDPAGNGDLMPLEGAEVQLADLSAATDPLGQVVFDGLPFGAYT
CCCCCCCCCCCEEEEEECCCCCCCCEEECCCCEEEEEECCCCCCHHHHHHHCCCCHHHHH
ALATAVNPLTGADPLSGTGAAQIIAEQPEATITIVLTWPPRPLPPPQEAQPEPETPTGSL
HHHHHCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCE
TVRVVDASSRNGGREVPIAGAIVIVGDRAGYTDRAGELHLTELPLGDYTVYAESGDPTDP
EEEEEECCCCCCCCCCCEEEEEEEEECCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCC
EGPIRSGQTRVRLTEEEPHRVVVIRLMWEQTEPVFDVAPGSIAGRICAPRTGAARVWATR
CCCCCCCCEEEEEECCCCCEEEEEEEEECCCCCEEEECCCCCCCCEECCCCCCEEEEEEC
ESGETVGTAVAATGRIGIWLDYTLSDLAPGVWTLTLQNPGDRPVSQQVIVQPGQVTLARD
CCCCCCEEEEEECCCEEEEEEEEHHHCCCCEEEEEECCCCCCCCCCEEEECCCCEEEEEE
FTLACTGDGLTPPPHLGYYVAGGLLLASGWLLRRMGRKAMA
EEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLHFLQVRISGGRTKGMKRRVLRQLQSLLAVLLSVAGLVVAAMPAFAREPETSAAWLLAM
CEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEE
EAEELLWEKAGGPECRNTTYQVTIPQLTEDRVYPLPIECPDLQNLAPGDSGPVGTYRVIN
CHHHHHHHCCCCCCCCCCEEEEECCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEEE
GGTAALRLQLRGRVEGVLFSGSVPVMLTIQDDTGRTYAYDAAYHDMPDLPAGETRTITVT
CCCEEEEEEEECCEEEEEEECCCCEEEEEECCCCCEEEEECHHCCCCCCCCCCEEEEEEE
YAWPFTAENVYQGELGKIFIDLLAKGTGDPGGGGPGGGGGGGGGGGGGGGSPPPDRPPTP
EECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ETESVAPASGRIIVRVLGDPAGNGDLMPLEGAEVQLADLSAATDPLGQVVFDGLPFGAYT
CCCCCCCCCCCEEEEEECCCCCCCCEEECCCCEEEEEECCCCCCHHHHHHHCCCCHHHHH
ALATAVNPLTGADPLSGTGAAQIIAEQPEATITIVLTWPPRPLPPPQEAQPEPETPTGSL
HHHHHCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCE
TVRVVDASSRNGGREVPIAGAIVIVGDRAGYTDRAGELHLTELPLGDYTVYAESGDPTDP
EEEEEECCCCCCCCCCCEEEEEEEEECCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCC
EGPIRSGQTRVRLTEEEPHRVVVIRLMWEQTEPVFDVAPGSIAGRICAPRTGAARVWATR
CCCCCCCCEEEEEECCCCCEEEEEEEEECCCCCEEEECCCCCCCCEECCCCCCEEEEEEC
ESGETVGTAVAATGRIGIWLDYTLSDLAPGVWTLTLQNPGDRPVSQQVIVQPGQVTLARD
CCCCCCEEEEEECCCEEEEEEEEHHHCCCCEEEEEECCCCCCCCCCEEEECCCCEEEEEE
FTLACTGDGLTPPPHLGYYVAGGLLLASGWLLRRMGRKAMA
EEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA