| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51891854
Identifier: 51891854
GI number: 51891854
Start: 788776
End: 789963
Strand: Reverse
Name: 51891854
Synonym: STH716
Alternate gene names: NA
Gene position: 789963-788776 (Counterclockwise)
Preceding gene: 51891855
Following gene: 51891852
Centisome position: 22.15
GC content: 67.59
Gene sequence:
>1188_bases TTGCTTCAGAAGCTGCAGCTGGTGGCGCGGGAAGGCAGTCTGTCCGTCACCGACGTATATCTCGGCCACATCAAGCGGGA CGAGGATCGCAAGCTCCTCGCCCACGCCGACGCCTACAGGTGGAGCGACCTCGATCCGCAGCTGCGGGCGATCCTGACGC AGCACCTGTACCAGGCCATCGAGGGCGCACAGGGGGAGGTCAACTTCCCCTGCATGTACACCGGGGAGGTCCTGCCGGTC GACAAGGTGGCCTCGGCGGAATACGACCGGCTCCATAACCGCCCGTCGGTGGAGGTGCTGGAGGCCATCCGCGACATGGA GGAGGTCCACCCCCAGTCCCTGGTGGACCTGGGCAACGTGTTGGCGTACAAGGTGATGGCCGCCGGGGCCATCAAGAATC ACCTGGTGGCCATTCTGCGGTTCCGGGCGGTGCCGGAGCTCGGGGCCACGCCCCTGCGGTTCAGCTTTGCGACCGTCCTG GACCTGGAAGATCGGGAAGAGTCGCTCTTCGACGAGCACACCGGCAGCTTCCGCACCCAGGTGCTGAACAACGTGATCAA GCGTGGCAGCGTCTCCCGGGCCGTGTTCTTCCCCTGCCTCGATGCGGAGGGGAGGGAGATCGCCGACCTCATGGTGTACG CCGGCAGCGGCGCCGCCGCGTGGTTCAAGGCGCTGGAGGCCACACGCCGATTGAGCCCCCGGCGGGAGGGCCAGGCGCTC CTCCGGATGATTACCGAGCAGAACGCGACGGGAGAGGTGCCCCACGACCTGTTCCGGCGAATGGGCGCTGACCTGCTGGA CGAGGCCGCGGACGGGCTCAGCGCCGAATCCGTGGTCCGCAGCATGGAGAAGGCGGTGGGCCACGGCGTCGACCGGCTGG GCTTCCAGGCCCGCTGGGAGTCGGCGTTCGGCGACCTCTCCTACCGTCCCGCCTACAACTCGCTCTTCGGCGGCGCGGAA AAGCCGACCCGCATGAAGATGCGGGCCGGCAGCATCGAGATCACCCTGACGCCGGCGGATCTGGAGTCCTTCCGCCAGGT CACCGTGGGCGACCGGACCTTCATCCTCTTCGCCGTGCCGGAACGGGCACGGGTGGTAGTCGGGAAGGACCTGGACCTGA AGATCAAGCCGGTCGGGCTGGCGGACATTCAGCGCTGGATGACCGGCGAAGAGGACCCGGCATCCTGA
Upstream 100 bases:
>100_bases GCTGGCTGCTGCGCAGGATGGGCAGAAAGGCGATGGCATGATACGATAGCACTGCCGTCTCTCGTGCGGCCCACACTCAT ACCGTTTGGAGGGCGAATCG
Downstream 100 bases:
>100_bases AGCCCGGCATCCTGCCCGCGCTGGCGGCGGGCCGCCTCCTGGGCGGCCTGGAGGGCGGCATCCAGCTTCCGCAGCAGCCG GACCCATTTCAGGACGGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 395; Mature: 395
Protein sequence:
>395_residues MLQKLQLVAREGSLSVTDVYLGHIKRDEDRKLLAHADAYRWSDLDPQLRAILTQHLYQAIEGAQGEVNFPCMYTGEVLPV DKVASAEYDRLHNRPSVEVLEAIRDMEEVHPQSLVDLGNVLAYKVMAAGAIKNHLVAILRFRAVPELGATPLRFSFATVL DLEDREESLFDEHTGSFRTQVLNNVIKRGSVSRAVFFPCLDAEGREIADLMVYAGSGAAAWFKALEATRRLSPRREGQAL LRMITEQNATGEVPHDLFRRMGADLLDEAADGLSAESVVRSMEKAVGHGVDRLGFQARWESAFGDLSYRPAYNSLFGGAE KPTRMKMRAGSIEITLTPADLESFRQVTVGDRTFILFAVPERARVVVGKDLDLKIKPVGLADIQRWMTGEEDPAS
Sequences:
>Translated_395_residues MLQKLQLVAREGSLSVTDVYLGHIKRDEDRKLLAHADAYRWSDLDPQLRAILTQHLYQAIEGAQGEVNFPCMYTGEVLPV DKVASAEYDRLHNRPSVEVLEAIRDMEEVHPQSLVDLGNVLAYKVMAAGAIKNHLVAILRFRAVPELGATPLRFSFATVL DLEDREESLFDEHTGSFRTQVLNNVIKRGSVSRAVFFPCLDAEGREIADLMVYAGSGAAAWFKALEATRRLSPRREGQAL LRMITEQNATGEVPHDLFRRMGADLLDEAADGLSAESVVRSMEKAVGHGVDRLGFQARWESAFGDLSYRPAYNSLFGGAE KPTRMKMRAGSIEITLTPADLESFRQVTVGDRTFILFAVPERARVVVGKDLDLKIKPVGLADIQRWMTGEEDPAS >Mature_395_residues MLQKLQLVAREGSLSVTDVYLGHIKRDEDRKLLAHADAYRWSDLDPQLRAILTQHLYQAIEGAQGEVNFPCMYTGEVLPV DKVASAEYDRLHNRPSVEVLEAIRDMEEVHPQSLVDLGNVLAYKVMAAGAIKNHLVAILRFRAVPELGATPLRFSFATVL DLEDREESLFDEHTGSFRTQVLNNVIKRGSVSRAVFFPCLDAEGREIADLMVYAGSGAAAWFKALEATRRLSPRREGQAL LRMITEQNATGEVPHDLFRRMGADLLDEAADGLSAESVVRSMEKAVGHGVDRLGFQARWESAFGDLSYRPAYNSLFGGAE KPTRMKMRAGSIEITLTPADLESFRQVTVGDRTFILFAVPERARVVVGKDLDLKIKPVGLADIQRWMTGEEDPAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43911; Mature: 43911
Theoretical pI: Translated: 5.51; Mature: 5.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQKLQLVAREGSLSVTDVYLGHIKRDEDRKLLAHADAYRWSDLDPQLRAILTQHLYQAI CCCHHHHHHHCCCCEEHHHHHHHCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH EGAQGEVNFPCMYTGEVLPVDKVASAEYDRLHNRPSVEVLEAIRDMEEVHPQSLVDLGNV CCCCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHH LAYKVMAAGAIKNHLVAILRFRAVPELGATPLRFSFATVLDLEDREESLFDEHTGSFRTQ HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHEEEEECCHHHHHHHHHHCCHHHHH VLNNVIKRGSVSRAVFFPCLDAEGREIADLMVYAGSGAAAWFKALEATRRLSPRREGQAL HHHHHHHCCCCCCEEEEEECCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHH LRMITEQNATGEVPHDLFRRMGADLLDEAADGLSAESVVRSMEKAVGHGVDRLGFQARWE HHHHHHCCCCCCCHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHCHHHHHH SAFGDLSYRPAYNSLFGGAEKPTRMKMRAGSIEITLTPADLESFRQVTVGDRTFILFAVP HHCCCCCCCCCHHHHCCCCCCCCEEEEECCEEEEEEEHHHHHHHHHEECCCCEEEEEECC ERARVVVGKDLDLKIKPVGLADIQRWMTGEEDPAS CCCEEEECCCCCEEEECCCHHHHHHHHCCCCCCCC >Mature Secondary Structure MLQKLQLVAREGSLSVTDVYLGHIKRDEDRKLLAHADAYRWSDLDPQLRAILTQHLYQAI CCCHHHHHHHCCCCEEHHHHHHHCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH EGAQGEVNFPCMYTGEVLPVDKVASAEYDRLHNRPSVEVLEAIRDMEEVHPQSLVDLGNV CCCCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHH LAYKVMAAGAIKNHLVAILRFRAVPELGATPLRFSFATVLDLEDREESLFDEHTGSFRTQ HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHEEEEECCHHHHHHHHHHCCHHHHH VLNNVIKRGSVSRAVFFPCLDAEGREIADLMVYAGSGAAAWFKALEATRRLSPRREGQAL HHHHHHHCCCCCCEEEEEECCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHH LRMITEQNATGEVPHDLFRRMGADLLDEAADGLSAESVVRSMEKAVGHGVDRLGFQARWE HHHHHHCCCCCCCHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHCHHHHHH SAFGDLSYRPAYNSLFGGAEKPTRMKMRAGSIEITLTPADLESFRQVTVGDRTFILFAVP HHCCCCCCCCCHHHHCCCCCCCCEEEEECCEEEEEEEHHHHHHHHHEECCCCEEEEEECC ERARVVVGKDLDLKIKPVGLADIQRWMTGEEDPAS CCCEEEECCCCCEEEECCCHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA