Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51891826

Identifier: 51891826

GI number: 51891826

Start: 756190

End: 758055

Strand: Reverse

Name: 51891826

Synonym: STH688

Alternate gene names: NA

Gene position: 758055-756190 (Counterclockwise)

Preceding gene: 51891827

Following gene: 51891824

Centisome position: 21.26

GC content: 74.81

Gene sequence:

>1866_bases
ATGTCGTTCACGCCTGACGAGGCACGGGGCACGCAGCCGGCGCCCGGTGCGGCAGGCGGGGCGCCGGTGCTGACCGTGGC
GCTCAACGTCGTGCGGGAGACCCTGCGCAGCCGGGGGCTCTATGCCCTCACCGCCGTCGGCCTCCTCCTCATGTGCGTGG
TGCTGATCAGCAGCCGCAGTTCGGTGCGGGATGCCGCGGGCAACGACCTGCTGGCTGACCCCGCCGGGGCGATGCGGGTC
GGCTTCGCCATGGCCGGCTTCGTTGGGGCCGTCGTGACCGTGGTGCTCAGCATGAACACCCTGCCCCGGGAGTTCGAGCG
GGGCACCGCCGAGCTGCTCCTGGTCCGGCCCCTTCCCCGTTGGCAGATCGGCGCGGGGTTCCTCCTTGGCAATGTTCTCA
GCGGGTGGCTCTTTCTCCTGGTCCTGGCGGTGCCGCTCTTCCCGGCCCTGGTGGTGCGGGGTGGGTCGGACCTGGTCCCC
GCACTGCTCCTCGCCCTGACCGGGCTCCTGCTCAACGCCGCCGCGGTCGCGGCGGTGACCACGCTCTGCTCGGTGTGGCT
GCCCGCGCCCGCCGCCGGCTTTCTGGGGCTGCTCGCCTACGGGCTCGGCGCCTTCGGCCCCGAGCTCTCCGCCCTGGTGT
CGCTCGCGGACGGCTGGTGGACCCCTCTCGCCCGCGCCGGGCTGGCGCTGCTGCCCCCGACGGGCGCAGTCGCGGCGTCG
GTCCTGCGGCTCTTCGCCCCCGGCGGTGCGGTGGACCCCCGGCCGCTGCTGGGCGGGCTGCTCCACCTCTGGGCCGCCGG
AGGGCTGACGGCGGCCGCCTTCGGGTGGCGGGAAGCGTCCCGCCGCATCGCCCTGGCCTGGCTGGGCGCAGGGATTCTGC
TGGCGGCAGCCCTGGCGGGGGCGCCGGACCCGCTGGCCTGGACGGAAGAGGACGCCGCCCTGCTGGAGGCGGCCCTGCGG
CGGGCCCGGGACGTGGCCGGGCTCTTCGACGGCTGGGAGCCCGAGTCGACCCCAATCCTGCTCACCAAAGGGCGGGTGAA
CTACCTGGTCAACTTCCCTGCCGGGGCCGAAGCTCCGCCCGGCACGCCCGTGGCAGCCGGAGCGCTGAAGGTGGTCCGGC
TGCAGCGCCCGGAGATCCCCGTCGTGGCCAATGGCGTCTGGAAGGTCGGCGAGCAGCCCGTCGCCGTGGTGGCTGGCCGG
CGGCTGCTGGACCAGGCGCTGGGCGGCCTGGAGGCCGGCGAGGAGCTCCTGGCGGGCGGCGAGGCCGGGCTCCTGAAAGG
GCTTGTGGGCGCCCGGATCGGGGACGGGCTCACGGAGGACGAGTACGTGGGGGCGGTGGTGCACGAGCTGTTCCACGCCT
ACCAGATGCCCGTGGTCGAGGAGTGGACCGCCGGCTGGGACGAGGGCCATGCGCAGGAGAGGCTCTGGTATGAGCTCTAC
TTGGACGCGGAGAACAACCGGCTGCAGGCGCGGGAGGCGGAGCATCTGCGCGCGGCGGCGCAGGCGACCGGCGAGGCCGG
CGTCCGCGCGGCCGTGCGGGCGTTCCTGGCGGTGCGGGACGCCCGGGCAGCGTACTGGCGGAGCCGGCTGGGTCCGGAGG
CGGATCCGCTGCTGGAGGTGGAGCGGCTTTACGAGTGGCTGGAGGGACTGGCCCGCTACGTGCAGGCCCACGCGGAGGCG
AACGGCCTGGACGCCCTGCTCGATGAACTCGCCGAGCCCATCGGCGAGGGCGGGACGCCCCGCTCCCGGGTCTACGCCCT
CGGTGCCGCCCAGGCCCTCGCGCTGGACCGTCTGAGCCCGGGGTGGCGGCAGGAGGCGATGCAGGGCGTCAGCCTGGAGG
CCCTGCTGCGGGCGGTGGCAGACTAA

Upstream 100 bases:

>100_bases
CGGGTGGCGATCATGAAGGCGGGCCGGCTCGCGGCCGTGGAGCCGCCCGCCGGCGACCTGGAGGCCCGGTTCCTGGAGCT
GATGGGAGGAGGTGAGGCCG

Downstream 100 bases:

>100_bases
GGCGCCACGCCGCCTCGGCGTGGCGCCCGTCGCTCACTTGAACCCGCTGTGCATGAAGCTGCTGATGAACTGCCGCTGGA
AGATGAGGAACAGCGCCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 621; Mature: 620

Protein sequence:

>621_residues
MSFTPDEARGTQPAPGAAGGAPVLTVALNVVRETLRSRGLYALTAVGLLLMCVVLISSRSSVRDAAGNDLLADPAGAMRV
GFAMAGFVGAVVTVVLSMNTLPREFERGTAELLLVRPLPRWQIGAGFLLGNVLSGWLFLLVLAVPLFPALVVRGGSDLVP
ALLLALTGLLLNAAAVAAVTTLCSVWLPAPAAGFLGLLAYGLGAFGPELSALVSLADGWWTPLARAGLALLPPTGAVAAS
VLRLFAPGGAVDPRPLLGGLLHLWAAGGLTAAAFGWREASRRIALAWLGAGILLAAALAGAPDPLAWTEEDAALLEAALR
RARDVAGLFDGWEPESTPILLTKGRVNYLVNFPAGAEAPPGTPVAAGALKVVRLQRPEIPVVANGVWKVGEQPVAVVAGR
RLLDQALGGLEAGEELLAGGEAGLLKGLVGARIGDGLTEDEYVGAVVHELFHAYQMPVVEEWTAGWDEGHAQERLWYELY
LDAENNRLQAREAEHLRAAAQATGEAGVRAAVRAFLAVRDARAAYWRSRLGPEADPLLEVERLYEWLEGLARYVQAHAEA
NGLDALLDELAEPIGEGGTPRSRVYALGAAQALALDRLSPGWRQEAMQGVSLEALLRAVAD

Sequences:

>Translated_621_residues
MSFTPDEARGTQPAPGAAGGAPVLTVALNVVRETLRSRGLYALTAVGLLLMCVVLISSRSSVRDAAGNDLLADPAGAMRV
GFAMAGFVGAVVTVVLSMNTLPREFERGTAELLLVRPLPRWQIGAGFLLGNVLSGWLFLLVLAVPLFPALVVRGGSDLVP
ALLLALTGLLLNAAAVAAVTTLCSVWLPAPAAGFLGLLAYGLGAFGPELSALVSLADGWWTPLARAGLALLPPTGAVAAS
VLRLFAPGGAVDPRPLLGGLLHLWAAGGLTAAAFGWREASRRIALAWLGAGILLAAALAGAPDPLAWTEEDAALLEAALR
RARDVAGLFDGWEPESTPILLTKGRVNYLVNFPAGAEAPPGTPVAAGALKVVRLQRPEIPVVANGVWKVGEQPVAVVAGR
RLLDQALGGLEAGEELLAGGEAGLLKGLVGARIGDGLTEDEYVGAVVHELFHAYQMPVVEEWTAGWDEGHAQERLWYELY
LDAENNRLQAREAEHLRAAAQATGEAGVRAAVRAFLAVRDARAAYWRSRLGPEADPLLEVERLYEWLEGLARYVQAHAEA
NGLDALLDELAEPIGEGGTPRSRVYALGAAQALALDRLSPGWRQEAMQGVSLEALLRAVAD
>Mature_620_residues
SFTPDEARGTQPAPGAAGGAPVLTVALNVVRETLRSRGLYALTAVGLLLMCVVLISSRSSVRDAAGNDLLADPAGAMRVG
FAMAGFVGAVVTVVLSMNTLPREFERGTAELLLVRPLPRWQIGAGFLLGNVLSGWLFLLVLAVPLFPALVVRGGSDLVPA
LLLALTGLLLNAAAVAAVTTLCSVWLPAPAAGFLGLLAYGLGAFGPELSALVSLADGWWTPLARAGLALLPPTGAVAASV
LRLFAPGGAVDPRPLLGGLLHLWAAGGLTAAAFGWREASRRIALAWLGAGILLAAALAGAPDPLAWTEEDAALLEAALRR
ARDVAGLFDGWEPESTPILLTKGRVNYLVNFPAGAEAPPGTPVAAGALKVVRLQRPEIPVVANGVWKVGEQPVAVVAGRR
LLDQALGGLEAGEELLAGGEAGLLKGLVGARIGDGLTEDEYVGAVVHELFHAYQMPVVEEWTAGWDEGHAQERLWYELYL
DAENNRLQAREAEHLRAAAQATGEAGVRAAVRAFLAVRDARAAYWRSRLGPEADPLLEVERLYEWLEGLARYVQAHAEAN
GLDALLDELAEPIGEGGTPRSRVYALGAAQALALDRLSPGWRQEAMQGVSLEALLRAVAD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64948; Mature: 64816

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFTPDEARGTQPAPGAAGGAPVLTVALNVVRETLRSRGLYALTAVGLLLMCVVLISSRS
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCH
SVRDAAGNDLLADPAGAMRVGFAMAGFVGAVVTVVLSMNTLPREFERGTAELLLVRPLPR
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCEEEEEECCCCC
WQIGAGFLLGNVLSGWLFLLVLAVPLFPALVVRGGSDLVPALLLALTGLLLNAAAVAAVT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
TLCSVWLPAPAAGFLGLLAYGLGAFGPELSALVSLADGWWTPLARAGLALLPPTGAVAAS
HHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHCCEEECCCCHHHHHH
VLRLFAPGGAVDPRPLLGGLLHLWAAGGLTAAAFGWREASRRIALAWLGAGILLAAALAG
HHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCEEHHHHHHHHHHHHHHHCC
APDPLAWTEEDAALLEAALRRARDVAGLFDGWEPESTPILLTKGRVNYLVNFPAGAEAPP
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCEEEEEECCCCCCCCC
GTPVAAGALKVVRLQRPEIPVVANGVWKVGEQPVAVVAGRRLLDQALGGLEAGEELLAGG
CCCHHHHHHHHHHCCCCCCCEEECCHHHCCCCCHHHHHHHHHHHHHHCCHHCCHHHHCCC
EAGLLKGLVGARIGDGLTEDEYVGAVVHELFHAYQMPVVEEWTAGWDEGHAQERLWYELY
CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHEEEEEE
LDAENNRLQAREAEHLRAAAQATGEAGVRAAVRAFLAVRDARAAYWRSRLGPEADPLLEV
EECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
ERLYEWLEGLARYVQAHAEANGLDALLDELAEPIGEGGTPRSRVYALGAAQALALDRLSP
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHEEEHHHHHHHHHHHCCC
GWRQEAMQGVSLEALLRAVAD
CHHHHHHCCCCHHHHHHHHCC
>Mature Secondary Structure 
SFTPDEARGTQPAPGAAGGAPVLTVALNVVRETLRSRGLYALTAVGLLLMCVVLISSRS
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCH
SVRDAAGNDLLADPAGAMRVGFAMAGFVGAVVTVVLSMNTLPREFERGTAELLLVRPLPR
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCEEEEEECCCCC
WQIGAGFLLGNVLSGWLFLLVLAVPLFPALVVRGGSDLVPALLLALTGLLLNAAAVAAVT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
TLCSVWLPAPAAGFLGLLAYGLGAFGPELSALVSLADGWWTPLARAGLALLPPTGAVAAS
HHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHCCEEECCCCHHHHHH
VLRLFAPGGAVDPRPLLGGLLHLWAAGGLTAAAFGWREASRRIALAWLGAGILLAAALAG
HHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCEEHHHHHHHHHHHHHHHCC
APDPLAWTEEDAALLEAALRRARDVAGLFDGWEPESTPILLTKGRVNYLVNFPAGAEAPP
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCEEEEEECCCCCCCCC
GTPVAAGALKVVRLQRPEIPVVANGVWKVGEQPVAVVAGRRLLDQALGGLEAGEELLAGG
CCCHHHHHHHHHHCCCCCCCEEECCHHHCCCCCHHHHHHHHHHHHHHCCHHCCHHHHCCC
EAGLLKGLVGARIGDGLTEDEYVGAVVHELFHAYQMPVVEEWTAGWDEGHAQERLWYELY
CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHEEEEEE
LDAENNRLQAREAEHLRAAAQATGEAGVRAAVRAFLAVRDARAAYWRSRLGPEADPLLEV
EECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
ERLYEWLEGLARYVQAHAEANGLDALLDELAEPIGEGGTPRSRVYALGAAQALALDRLSP
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHEEEHHHHHHHHHHHCCC
GWRQEAMQGVSLEALLRAVAD
CHHHHHHCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA