| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51891826
Identifier: 51891826
GI number: 51891826
Start: 756190
End: 758055
Strand: Reverse
Name: 51891826
Synonym: STH688
Alternate gene names: NA
Gene position: 758055-756190 (Counterclockwise)
Preceding gene: 51891827
Following gene: 51891824
Centisome position: 21.26
GC content: 74.81
Gene sequence:
>1866_bases ATGTCGTTCACGCCTGACGAGGCACGGGGCACGCAGCCGGCGCCCGGTGCGGCAGGCGGGGCGCCGGTGCTGACCGTGGC GCTCAACGTCGTGCGGGAGACCCTGCGCAGCCGGGGGCTCTATGCCCTCACCGCCGTCGGCCTCCTCCTCATGTGCGTGG TGCTGATCAGCAGCCGCAGTTCGGTGCGGGATGCCGCGGGCAACGACCTGCTGGCTGACCCCGCCGGGGCGATGCGGGTC GGCTTCGCCATGGCCGGCTTCGTTGGGGCCGTCGTGACCGTGGTGCTCAGCATGAACACCCTGCCCCGGGAGTTCGAGCG GGGCACCGCCGAGCTGCTCCTGGTCCGGCCCCTTCCCCGTTGGCAGATCGGCGCGGGGTTCCTCCTTGGCAATGTTCTCA GCGGGTGGCTCTTTCTCCTGGTCCTGGCGGTGCCGCTCTTCCCGGCCCTGGTGGTGCGGGGTGGGTCGGACCTGGTCCCC GCACTGCTCCTCGCCCTGACCGGGCTCCTGCTCAACGCCGCCGCGGTCGCGGCGGTGACCACGCTCTGCTCGGTGTGGCT GCCCGCGCCCGCCGCCGGCTTTCTGGGGCTGCTCGCCTACGGGCTCGGCGCCTTCGGCCCCGAGCTCTCCGCCCTGGTGT CGCTCGCGGACGGCTGGTGGACCCCTCTCGCCCGCGCCGGGCTGGCGCTGCTGCCCCCGACGGGCGCAGTCGCGGCGTCG GTCCTGCGGCTCTTCGCCCCCGGCGGTGCGGTGGACCCCCGGCCGCTGCTGGGCGGGCTGCTCCACCTCTGGGCCGCCGG AGGGCTGACGGCGGCCGCCTTCGGGTGGCGGGAAGCGTCCCGCCGCATCGCCCTGGCCTGGCTGGGCGCAGGGATTCTGC TGGCGGCAGCCCTGGCGGGGGCGCCGGACCCGCTGGCCTGGACGGAAGAGGACGCCGCCCTGCTGGAGGCGGCCCTGCGG CGGGCCCGGGACGTGGCCGGGCTCTTCGACGGCTGGGAGCCCGAGTCGACCCCAATCCTGCTCACCAAAGGGCGGGTGAA CTACCTGGTCAACTTCCCTGCCGGGGCCGAAGCTCCGCCCGGCACGCCCGTGGCAGCCGGAGCGCTGAAGGTGGTCCGGC TGCAGCGCCCGGAGATCCCCGTCGTGGCCAATGGCGTCTGGAAGGTCGGCGAGCAGCCCGTCGCCGTGGTGGCTGGCCGG CGGCTGCTGGACCAGGCGCTGGGCGGCCTGGAGGCCGGCGAGGAGCTCCTGGCGGGCGGCGAGGCCGGGCTCCTGAAAGG GCTTGTGGGCGCCCGGATCGGGGACGGGCTCACGGAGGACGAGTACGTGGGGGCGGTGGTGCACGAGCTGTTCCACGCCT ACCAGATGCCCGTGGTCGAGGAGTGGACCGCCGGCTGGGACGAGGGCCATGCGCAGGAGAGGCTCTGGTATGAGCTCTAC TTGGACGCGGAGAACAACCGGCTGCAGGCGCGGGAGGCGGAGCATCTGCGCGCGGCGGCGCAGGCGACCGGCGAGGCCGG CGTCCGCGCGGCCGTGCGGGCGTTCCTGGCGGTGCGGGACGCCCGGGCAGCGTACTGGCGGAGCCGGCTGGGTCCGGAGG CGGATCCGCTGCTGGAGGTGGAGCGGCTTTACGAGTGGCTGGAGGGACTGGCCCGCTACGTGCAGGCCCACGCGGAGGCG AACGGCCTGGACGCCCTGCTCGATGAACTCGCCGAGCCCATCGGCGAGGGCGGGACGCCCCGCTCCCGGGTCTACGCCCT CGGTGCCGCCCAGGCCCTCGCGCTGGACCGTCTGAGCCCGGGGTGGCGGCAGGAGGCGATGCAGGGCGTCAGCCTGGAGG CCCTGCTGCGGGCGGTGGCAGACTAA
Upstream 100 bases:
>100_bases CGGGTGGCGATCATGAAGGCGGGCCGGCTCGCGGCCGTGGAGCCGCCCGCCGGCGACCTGGAGGCCCGGTTCCTGGAGCT GATGGGAGGAGGTGAGGCCG
Downstream 100 bases:
>100_bases GGCGCCACGCCGCCTCGGCGTGGCGCCCGTCGCTCACTTGAACCCGCTGTGCATGAAGCTGCTGATGAACTGCCGCTGGA AGATGAGGAACAGCGCCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 621; Mature: 620
Protein sequence:
>621_residues MSFTPDEARGTQPAPGAAGGAPVLTVALNVVRETLRSRGLYALTAVGLLLMCVVLISSRSSVRDAAGNDLLADPAGAMRV GFAMAGFVGAVVTVVLSMNTLPREFERGTAELLLVRPLPRWQIGAGFLLGNVLSGWLFLLVLAVPLFPALVVRGGSDLVP ALLLALTGLLLNAAAVAAVTTLCSVWLPAPAAGFLGLLAYGLGAFGPELSALVSLADGWWTPLARAGLALLPPTGAVAAS VLRLFAPGGAVDPRPLLGGLLHLWAAGGLTAAAFGWREASRRIALAWLGAGILLAAALAGAPDPLAWTEEDAALLEAALR RARDVAGLFDGWEPESTPILLTKGRVNYLVNFPAGAEAPPGTPVAAGALKVVRLQRPEIPVVANGVWKVGEQPVAVVAGR RLLDQALGGLEAGEELLAGGEAGLLKGLVGARIGDGLTEDEYVGAVVHELFHAYQMPVVEEWTAGWDEGHAQERLWYELY LDAENNRLQAREAEHLRAAAQATGEAGVRAAVRAFLAVRDARAAYWRSRLGPEADPLLEVERLYEWLEGLARYVQAHAEA NGLDALLDELAEPIGEGGTPRSRVYALGAAQALALDRLSPGWRQEAMQGVSLEALLRAVAD
Sequences:
>Translated_621_residues MSFTPDEARGTQPAPGAAGGAPVLTVALNVVRETLRSRGLYALTAVGLLLMCVVLISSRSSVRDAAGNDLLADPAGAMRV GFAMAGFVGAVVTVVLSMNTLPREFERGTAELLLVRPLPRWQIGAGFLLGNVLSGWLFLLVLAVPLFPALVVRGGSDLVP ALLLALTGLLLNAAAVAAVTTLCSVWLPAPAAGFLGLLAYGLGAFGPELSALVSLADGWWTPLARAGLALLPPTGAVAAS VLRLFAPGGAVDPRPLLGGLLHLWAAGGLTAAAFGWREASRRIALAWLGAGILLAAALAGAPDPLAWTEEDAALLEAALR RARDVAGLFDGWEPESTPILLTKGRVNYLVNFPAGAEAPPGTPVAAGALKVVRLQRPEIPVVANGVWKVGEQPVAVVAGR RLLDQALGGLEAGEELLAGGEAGLLKGLVGARIGDGLTEDEYVGAVVHELFHAYQMPVVEEWTAGWDEGHAQERLWYELY LDAENNRLQAREAEHLRAAAQATGEAGVRAAVRAFLAVRDARAAYWRSRLGPEADPLLEVERLYEWLEGLARYVQAHAEA NGLDALLDELAEPIGEGGTPRSRVYALGAAQALALDRLSPGWRQEAMQGVSLEALLRAVAD >Mature_620_residues SFTPDEARGTQPAPGAAGGAPVLTVALNVVRETLRSRGLYALTAVGLLLMCVVLISSRSSVRDAAGNDLLADPAGAMRVG FAMAGFVGAVVTVVLSMNTLPREFERGTAELLLVRPLPRWQIGAGFLLGNVLSGWLFLLVLAVPLFPALVVRGGSDLVPA LLLALTGLLLNAAAVAAVTTLCSVWLPAPAAGFLGLLAYGLGAFGPELSALVSLADGWWTPLARAGLALLPPTGAVAASV LRLFAPGGAVDPRPLLGGLLHLWAAGGLTAAAFGWREASRRIALAWLGAGILLAAALAGAPDPLAWTEEDAALLEAALRR ARDVAGLFDGWEPESTPILLTKGRVNYLVNFPAGAEAPPGTPVAAGALKVVRLQRPEIPVVANGVWKVGEQPVAVVAGRR LLDQALGGLEAGEELLAGGEAGLLKGLVGARIGDGLTEDEYVGAVVHELFHAYQMPVVEEWTAGWDEGHAQERLWYELYL DAENNRLQAREAEHLRAAAQATGEAGVRAAVRAFLAVRDARAAYWRSRLGPEADPLLEVERLYEWLEGLARYVQAHAEAN GLDALLDELAEPIGEGGTPRSRVYALGAAQALALDRLSPGWRQEAMQGVSLEALLRAVAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64948; Mature: 64816
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFTPDEARGTQPAPGAAGGAPVLTVALNVVRETLRSRGLYALTAVGLLLMCVVLISSRS CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCH SVRDAAGNDLLADPAGAMRVGFAMAGFVGAVVTVVLSMNTLPREFERGTAELLLVRPLPR HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCEEEEEECCCCC WQIGAGFLLGNVLSGWLFLLVLAVPLFPALVVRGGSDLVPALLLALTGLLLNAAAVAAVT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH TLCSVWLPAPAAGFLGLLAYGLGAFGPELSALVSLADGWWTPLARAGLALLPPTGAVAAS HHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHCCEEECCCCHHHHHH VLRLFAPGGAVDPRPLLGGLLHLWAAGGLTAAAFGWREASRRIALAWLGAGILLAAALAG HHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCEEHHHHHHHHHHHHHHHCC APDPLAWTEEDAALLEAALRRARDVAGLFDGWEPESTPILLTKGRVNYLVNFPAGAEAPP CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCEEEEEECCCCCCCCC GTPVAAGALKVVRLQRPEIPVVANGVWKVGEQPVAVVAGRRLLDQALGGLEAGEELLAGG CCCHHHHHHHHHHCCCCCCCEEECCHHHCCCCCHHHHHHHHHHHHHHCCHHCCHHHHCCC EAGLLKGLVGARIGDGLTEDEYVGAVVHELFHAYQMPVVEEWTAGWDEGHAQERLWYELY CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHEEEEEE LDAENNRLQAREAEHLRAAAQATGEAGVRAAVRAFLAVRDARAAYWRSRLGPEADPLLEV EECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH ERLYEWLEGLARYVQAHAEANGLDALLDELAEPIGEGGTPRSRVYALGAAQALALDRLSP HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHEEEHHHHHHHHHHHCCC GWRQEAMQGVSLEALLRAVAD CHHHHHHCCCCHHHHHHHHCC >Mature Secondary Structure SFTPDEARGTQPAPGAAGGAPVLTVALNVVRETLRSRGLYALTAVGLLLMCVVLISSRS CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCH SVRDAAGNDLLADPAGAMRVGFAMAGFVGAVVTVVLSMNTLPREFERGTAELLLVRPLPR HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCEEEEEECCCCC WQIGAGFLLGNVLSGWLFLLVLAVPLFPALVVRGGSDLVPALLLALTGLLLNAAAVAAVT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH TLCSVWLPAPAAGFLGLLAYGLGAFGPELSALVSLADGWWTPLARAGLALLPPTGAVAAS HHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHCCEEECCCCHHHHHH VLRLFAPGGAVDPRPLLGGLLHLWAAGGLTAAAFGWREASRRIALAWLGAGILLAAALAG HHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCEEHHHHHHHHHHHHHHHCC APDPLAWTEEDAALLEAALRRARDVAGLFDGWEPESTPILLTKGRVNYLVNFPAGAEAPP CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCEEEEEECCCCCCCCC GTPVAAGALKVVRLQRPEIPVVANGVWKVGEQPVAVVAGRRLLDQALGGLEAGEELLAGG CCCHHHHHHHHHHCCCCCCCEEECCHHHCCCCCHHHHHHHHHHHHHHCCHHCCHHHHCCC EAGLLKGLVGARIGDGLTEDEYVGAVVHELFHAYQMPVVEEWTAGWDEGHAQERLWYELY CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHEEEEEE LDAENNRLQAREAEHLRAAAQATGEAGVRAAVRAFLAVRDARAAYWRSRLGPEADPLLEV EECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH ERLYEWLEGLARYVQAHAEANGLDALLDELAEPIGEGGTPRSRVYALGAAQALALDRLSP HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHEEEHHHHHHHHHHHCCC GWRQEAMQGVSLEALLRAVAD CHHHHHHCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA