| Definition | Borrelia garinii PBi chromosome chromosome linear, complete sequence. |
|---|---|
| Accession | NC_006156 |
| Length | 904,246 |
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The map label for this gene is 51598675
Identifier: 51598675
GI number: 51598675
Start: 429269
End: 430312
Strand: Direct
Name: 51598675
Synonym: BG0421
Alternate gene names: NA
Gene position: 429269-430312 (Clockwise)
Preceding gene: 51598674
Following gene: 51598683
Centisome position: 47.47
GC content: 30.65
Gene sequence:
>1044_bases ATGGAAAAGGTATTTAAAATAAAAAAAATTTGCTTTTGTTTGCTGCTTCTTTTGCAAGCAAAAATAGTTCTTGCCCAAAA TCAACACGACTTAAAATTCAATAATGAATATTTTTACTTTAATTTTCAATCGGCTTATTACCCTCCCCATGAGCTAGGAA CAAGTGGAAGTAACTTTTCACAAAGCTTTAAACACCCCAACTTCCAAAATATTGAACCAAGTTTAAAAATTCCAGCCAAT TATTGGGGAGGAATAAAATTAATATCATACTTAGGATACTATAAAAATTTTAAAGCTTTACACAATCCTAATTCTATATT TTTTAAAAACAATGGCATAGAAGTCGATTTAAATATCGGATTATCTCCTGTAAGTATCTCGCTTAAAAGCATGCTAAGCT TTACTCCTATTGCTTTTTTAAATTTATATGTATCAAATGAAATTGGTATGGGCTGGAAAGCTTTTGGATTTAAGGGGATT GGTGTGCACATTGAAAATGGAAAATATTCAAATGATATTGAATTTTATTCAGAAATAACAATAGGGGGACGATTCCAATT TGATTTAAACGCTATTTTTAAAGGGGAATGGACACACATTATTACAGTTATTGGAAATGATTTTACATACTTAATTAATC CTCATGCAAATAAAGATCAACTTTGGAAATATAAAGCAGACGATGGCAAAAATATAAATGGCATGCTAATAAAGCCTTAC GCTCTTTTAGCTTACAAAATGCCAATACCCCTTAACACCATAGGACTACTTTACGAAGGGAAAACACAAATTGGCAAAGA AAGAAACATAAGCTCATGGAAAAACAAAGGTTGGGGAAGTGATATTTTTTATCACAATATTTCTCTTATTGCTAATTTTG AAGTTGTCAAACCTTTAACAATTGGCCTTCAATTAAAATTATCTACAAATCCTACATACACAAGTAACACAGCTGGGCTA GCTGATGTTTCAAAAAGAATAGCAACTGGCAATTCCTATTTTTACTACGATTCTATCGGAATCTCTGTAACTTATAAATA CTAA
Upstream 100 bases:
>100_bases CTTAACAATGTTGATGCATCTGTTGAAATTGATGAAATTAAAAAAAAAATAATTAAAATAATGTTAAAAAAAAATTAAAT GGAAAAGGTAAAAAAAATAA
Downstream 100 bases:
>100_bases AGTCTAATAAAGATAAATTTAATATCTAAACTGATTTCTTCCAGAAACTTTAGCCTCATAAAGCTTGCTATCAGCAAGCT TTATGATATTGGTGAAATTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 347; Mature: 347
Protein sequence:
>347_residues MEKVFKIKKICFCLLLLLQAKIVLAQNQHDLKFNNEYFYFNFQSAYYPPHELGTSGSNFSQSFKHPNFQNIEPSLKIPAN YWGGIKLISYLGYYKNFKALHNPNSIFFKNNGIEVDLNIGLSPVSISLKSMLSFTPIAFLNLYVSNEIGMGWKAFGFKGI GVHIENGKYSNDIEFYSEITIGGRFQFDLNAIFKGEWTHIITVIGNDFTYLINPHANKDQLWKYKADDGKNINGMLIKPY ALLAYKMPIPLNTIGLLYEGKTQIGKERNISSWKNKGWGSDIFYHNISLIANFEVVKPLTIGLQLKLSTNPTYTSNTAGL ADVSKRIATGNSYFYYDSIGISVTYKY
Sequences:
>Translated_347_residues MEKVFKIKKICFCLLLLLQAKIVLAQNQHDLKFNNEYFYFNFQSAYYPPHELGTSGSNFSQSFKHPNFQNIEPSLKIPAN YWGGIKLISYLGYYKNFKALHNPNSIFFKNNGIEVDLNIGLSPVSISLKSMLSFTPIAFLNLYVSNEIGMGWKAFGFKGI GVHIENGKYSNDIEFYSEITIGGRFQFDLNAIFKGEWTHIITVIGNDFTYLINPHANKDQLWKYKADDGKNINGMLIKPY ALLAYKMPIPLNTIGLLYEGKTQIGKERNISSWKNKGWGSDIFYHNISLIANFEVVKPLTIGLQLKLSTNPTYTSNTAGL ADVSKRIATGNSYFYYDSIGISVTYKY >Mature_347_residues MEKVFKIKKICFCLLLLLQAKIVLAQNQHDLKFNNEYFYFNFQSAYYPPHELGTSGSNFSQSFKHPNFQNIEPSLKIPAN YWGGIKLISYLGYYKNFKALHNPNSIFFKNNGIEVDLNIGLSPVSISLKSMLSFTPIAFLNLYVSNEIGMGWKAFGFKGI GVHIENGKYSNDIEFYSEITIGGRFQFDLNAIFKGEWTHIITVIGNDFTYLINPHANKDQLWKYKADDGKNINGMLIKPY ALLAYKMPIPLNTIGLLYEGKTQIGKERNISSWKNKGWGSDIFYHNISLIANFEVVKPLTIGLQLKLSTNPTYTSNTAGL ADVSKRIATGNSYFYYDSIGISVTYKY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39473; Mature: 39473
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKVFKIKKICFCLLLLLQAKIVLAQNQHDLKFNNEYFYFNFQSAYYPPHELGTSGSNFS CCHHHHHHHHHHHHHHHHHCEEEEECCCCCCEECCEEEEEEECCCCCCHHHHCCCCCCCH QSFKHPNFQNIEPSLKIPANYWGGIKLISYLGYYKNFKALHNPNSIFFKNNGIEVDLNIG HHHCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHCCHHHCCCCEEEEECCCEEEEEECC LSPVSISLKSMLSFTPIAFLNLYVSNEIGMGWKAFGFKGIGVHIENGKYSNDIEFYSEIT CCCEEHHHHHHHHHCCEEEEEEEEECCCCCCEECCCEEEEEEEEECCCCCCCCEEEEEEE IGGRFQFDLNAIFKGEWTHIITVIGNDFTYLINPHANKDQLWKYKADDGKNINGMLIKPY ECCEEEEEEEEEEECCCEEEEEEECCCEEEEECCCCCCCCEEEEECCCCCCCCCEEECCE ALLAYKMPIPLNTIGLLYEGKTQIGKERNISSWKNKGWGSDIFYHNISLIANFEVVKPLT EEEEEECCCCCCEEEEEEECCHHCCCCCCCCHHHCCCCCCCEEEEEEEEEEEEEEECEEE IGLQLKLSTNPTYTSNTAGLADVSKRIATGNSYFYYDSIGISVTYKY EEEEEEECCCCCCCCCCCCHHHHHHHHCCCCCEEEEECEEEEEEEEC >Mature Secondary Structure MEKVFKIKKICFCLLLLLQAKIVLAQNQHDLKFNNEYFYFNFQSAYYPPHELGTSGSNFS CCHHHHHHHHHHHHHHHHHCEEEEECCCCCCEECCEEEEEEECCCCCCHHHHCCCCCCCH QSFKHPNFQNIEPSLKIPANYWGGIKLISYLGYYKNFKALHNPNSIFFKNNGIEVDLNIG HHHCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHCCHHHCCCCEEEEECCCEEEEEECC LSPVSISLKSMLSFTPIAFLNLYVSNEIGMGWKAFGFKGIGVHIENGKYSNDIEFYSEIT CCCEEHHHHHHHHHCCEEEEEEEEECCCCCCEECCCEEEEEEEEECCCCCCCCEEEEEEE IGGRFQFDLNAIFKGEWTHIITVIGNDFTYLINPHANKDQLWKYKADDGKNINGMLIKPY ECCEEEEEEEEEEECCCEEEEEEECCCEEEEECCCCCCCCEEEEECCCCCCCCCEEECCE ALLAYKMPIPLNTIGLLYEGKTQIGKERNISSWKNKGWGSDIFYHNISLIANFEVVKPLT EEEEEECCCCCCEEEEEEECCHHCCCCCCCCHHHCCCCCCCEEEEEEEEEEEEEEECEEE IGLQLKLSTNPTYTSNTAGLADVSKRIATGNSYFYYDSIGISVTYKY EEEEEEECCCCCCCCCCCCHHHHHHHHCCCCCEEEEECEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA