| Definition | Borrelia garinii PBi chromosome chromosome linear, complete sequence. |
|---|---|
| Accession | NC_006156 |
| Length | 904,246 |
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The map label for this gene is gtaB [H]
Identifier: 51598468
GI number: 51598468
Start: 208304
End: 209140
Strand: Direct
Name: gtaB [H]
Synonym: BG0209
Alternate gene names: 51598468
Gene position: 208304-209140 (Clockwise)
Preceding gene: 51598466
Following gene: 51598469
Centisome position: 23.04
GC content: 26.76
Gene sequence:
>837_bases ATGAAAGGCATTATTCTAGCAGCTGGGTATGGAACAAGATTTTTACCAATAACAAAAACAATTCCAAAAGAAATGTTGCC AATTTTAAACAAGCCGGCCATAGATTATATTATCCAAGAATTTATCGATTCAGGAATAAAAGACATTTTATTAATAAGCT CAAGACGAAAAAAAGTTCTTGAAGATTATTTTGATAGAGAAATTGAACTTGAAAATATTTTTTTAAAAGAAAATAAAAAA AATGAATTAGAAAAAATCAAAAACAAAAAAATTAACATAAGCTTCATAAGACAAAAAGAAATGCTGGGCACAGGAAATGC TCTGCTTTATGCAAAACCCTGGATAAATAGAGAGCCTGTAATTGTAGCTTACCCTGACGATCTTCACATTGGAAATCCAG CATTAAGCTTACAATTAATCAAACTTTATGAAAAAACTGGAAAGAACATAATATCTATTATTGAAAATCCAGAAAATATA AACAGATACGGAGTAATAGATCTATATGAAGATAAAATCCATGTAAAAAACATTGTTGAAAAACCAAAAATTGGAAGTGA GCCTAGCAATAAAGCATCTATTGGAAGATTTTTGTATAACTATGAGTTTTTTGAACATTTAGAAGAAGGATTTAAACTGC ATCAAAAGGGTGAATACTATCACATTTATGCTTTAAAAAAACTTATGGATCAAAAAAAAGTATTATATAAAAATATTAAG GGGAAAAGAATTGATATAGGAACTCTTGAGGGCTATTTAGACGCAATAATAAATTTTGCAAAAAAAAATAAAAATTTAAT GGAAATTATAAAAAAAGGAATAAATGAAAACGATTAA
Upstream 100 bases:
>100_bases AGAACTTACATACATGAATAAAAATTTTAAAACAATTTTTAAAAACATTGAATATATAAAATTAAATTTTTGCTATAATC TTATTTCAAGAGAGAAAAGT
Downstream 100 bases:
>100_bases AAAGGATCCAGAATTTTATGATTCCCTTGCTAAATTAAAAAAGTACATAATCAAATATATAGAAGCAAAGGTTTTAAAAT ACAGTATTTCTTCCCAACTT
Product: UTP--glucose-1-phosphate uridylyltransferase
Products: NA
Alternate protein names: Alpha-D-glucosyl-1-phosphate uridylyltransferase; General stress protein 33; GSP33; UDP-glucose pyrophosphorylase; UDPGP; Uridine diphosphoglucose pyrophosphorylase [H]
Number of amino acids: Translated: 278; Mature: 278
Protein sequence:
>278_residues MKGIILAAGYGTRFLPITKTIPKEMLPILNKPAIDYIIQEFIDSGIKDILLISSRRKKVLEDYFDREIELENIFLKENKK NELEKIKNKKINISFIRQKEMLGTGNALLYAKPWINREPVIVAYPDDLHIGNPALSLQLIKLYEKTGKNIISIIENPENI NRYGVIDLYEDKIHVKNIVEKPKIGSEPSNKASIGRFLYNYEFFEHLEEGFKLHQKGEYYHIYALKKLMDQKKVLYKNIK GKRIDIGTLEGYLDAIINFAKKNKNLMEIIKKGINEND
Sequences:
>Translated_278_residues MKGIILAAGYGTRFLPITKTIPKEMLPILNKPAIDYIIQEFIDSGIKDILLISSRRKKVLEDYFDREIELENIFLKENKK NELEKIKNKKINISFIRQKEMLGTGNALLYAKPWINREPVIVAYPDDLHIGNPALSLQLIKLYEKTGKNIISIIENPENI NRYGVIDLYEDKIHVKNIVEKPKIGSEPSNKASIGRFLYNYEFFEHLEEGFKLHQKGEYYHIYALKKLMDQKKVLYKNIK GKRIDIGTLEGYLDAIINFAKKNKNLMEIIKKGINEND >Mature_278_residues MKGIILAAGYGTRFLPITKTIPKEMLPILNKPAIDYIIQEFIDSGIKDILLISSRRKKVLEDYFDREIELENIFLKENKK NELEKIKNKKINISFIRQKEMLGTGNALLYAKPWINREPVIVAYPDDLHIGNPALSLQLIKLYEKTGKNIISIIENPENI NRYGVIDLYEDKIHVKNIVEKPKIGSEPSNKASIGRFLYNYEFFEHLEEGFKLHQKGEYYHIYALKKLMDQKKVLYKNIK GKRIDIGTLEGYLDAIINFAKKNKNLMEIIKKGINEND
Specific function: Catalyzes the formation of UDP-glucose from glucose-1- phosphate and UTP. This is an intermediate step in the biosynthesis of diglucosyl-diacylglycerol (Glc2-DAG), i.e. the predominant glycolipid found in B.subtilis membrane, which is also used as a membr
COG id: COG1210
COG function: function code M; UDP-glucose pyrophosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDPGP type 2 family [H]
Homologues:
Organism=Homo sapiens, GI11761619, Length=264, Percent_Identity=24.2424242424242, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI11761621, Length=264, Percent_Identity=24.2424242424242, Blast_Score=69, Evalue=3e-12, Organism=Escherichia coli, GI1787488, Length=282, Percent_Identity=32.6241134751773, Blast_Score=146, Evalue=2e-36, Organism=Escherichia coli, GI1788355, Length=292, Percent_Identity=30.8219178082192, Blast_Score=131, Evalue=5e-32, Organism=Escherichia coli, GI1790224, Length=261, Percent_Identity=27.5862068965517, Blast_Score=81, Evalue=1e-16, Organism=Saccharomyces cerevisiae, GI6320148, Length=274, Percent_Identity=26.2773722627737, Blast_Score=67, Evalue=3e-12, Organism=Drosophila melanogaster, GI21355443, Length=258, Percent_Identity=24.8062015503876, Blast_Score=75, Evalue=5e-14, Organism=Drosophila melanogaster, GI24644084, Length=258, Percent_Identity=24.8062015503876, Blast_Score=75, Evalue=5e-14,
Paralogues:
None
Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 260 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005771 - InterPro: IPR005835 [H]
Pfam domain/function: PF00483 NTP_transferase [H]
EC number: =2.7.7.9 [H]
Molecular weight: Translated: 32329; Mature: 32329
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGIILAAGYGTRFLPITKTIPKEMLPILNKPAIDYIIQEFIDSGIKDILLISSRRKKVL CCCEEEECCCCCEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHH EDYFDREIELENIFLKENKKNELEKIKNKKINISFIRQKEMLGTGNALLYAKPWINREPV HHHHCCEEEEEHEEECCCCHHHHHHHHCCCEEEEEEEHHHHCCCCCEEEEECCCCCCCCE IVAYPDDLHIGNPALSLQLIKLYEKTGKNIISIIENPENINRYGVIDLYEDKIHVKNIVE EEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEHHCCCCCCCCEEEEEEECCHHHHHHHHH KPKIGSEPSNKASIGRFLYNYEFFEHLEEGFKLHQKGEYYHIYALKKLMDQKKVLYKNIK CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHCCC GKRIDIGTLEGYLDAIINFAKKNKNLMEIIKKGINEND CCEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCC >Mature Secondary Structure MKGIILAAGYGTRFLPITKTIPKEMLPILNKPAIDYIIQEFIDSGIKDILLISSRRKKVL CCCEEEECCCCCEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHH EDYFDREIELENIFLKENKKNELEKIKNKKINISFIRQKEMLGTGNALLYAKPWINREPV HHHHCCEEEEEHEEECCCCHHHHHHHHCCCEEEEEEEHHHHCCCCCEEEEECCCCCCCCE IVAYPDDLHIGNPALSLQLIKLYEKTGKNIISIIENPENINRYGVIDLYEDKIHVKNIVE EEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEHHCCCCCCCCEEEEEEECCHHHHHHHHH KPKIGSEPSNKASIGRFLYNYEFFEHLEEGFKLHQKGEYYHIYALKKLMDQKKVLYKNIK CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHCCC GKRIDIGTLEGYLDAIINFAKKNKNLMEIIKKGINEND CCEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8320212; 8126437; 9384377; 9298659 [H]