| Definition | Borrelia garinii PBi chromosome chromosome linear, complete sequence. |
|---|---|
| Accession | NC_006156 |
| Length | 904,246 |
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The map label for this gene is 51598466
Identifier: 51598466
GI number: 51598466
Start: 206124
End: 207701
Strand: Direct
Name: 51598466
Synonym: BG0207
Alternate gene names: NA
Gene position: 206124-207701 (Clockwise)
Preceding gene: 51598465
Following gene: 51598468
Centisome position: 22.8
GC content: 25.54
Gene sequence:
>1578_bases GTGATACTTAAAAAAATAAAGCAAATAAAAGATCTAAATCAACAAGACGTAATTTTTGCAAGAATAGGAAATTTATCAAA ACTTGGCACAAGAGTAAATGAAAAAATTATTAAAATACTTGATAAAGGTAATACACCTTACATTCCTGTACTTAAAAAAG AAGAAGATATGTCATATGAAGACCTGATAAAAAAAATAAATGAAGAAATTTTGAATGATGATCTTAGCTATTTAAGAGAA AAGCTAATAGATAATCTAAAAGACGTATATAAACCCTTTAAGGAAGACGACCCAATATTTTTTACCAAAGGGAAAAAACC ACTCATGAAAATAAATACATTAATGGAGGTTGAACCCAATCAAATTTATTGGAAAGAAATATTAGAAGGAAGCTTTAAAA TACTTCCAAGGCATAAAATAACATCTTTGCAAAAAATTTTATTAGAAATATATCATTATTTTGATGTTCAAAAGCTTAGA ACAAAAGAAAACCTTAAAGATAAAAAAACTTTAAAAAAATTATATTTATATTCTGCTAGAAGAGATTATGAATTTTTTAA AGGAAAGGTCAAAACAGAAGGCGATTCAATACTGCTGCATTCAGTCGACACAACAATTTATTTTCTAATTACGATTGCAA ATTTGAATAAAATAAGGTCTTTGAAAAATGCACCCCGTTCAACAATGAAATTTTTTCTTGATAAAACTGAATATACTGAA TTTACAGAATTTTTCTACGCAGAAGACATGATACTACAAGCCGCACTAGGGTCATTACTACACTCAATAGGATTAATGCA TATAACAATACTAGAAAATATAGGAAATAAAATAAGCCTTAAAGATAAAAATTTAAAAGAACAGCATAAATTAAAAATAG AATACTTGGAAAAAAATATTAACATTGCTAAAAATTTGTTCAGAATAAGGGAAGATATTTCAGCTATTACAAAAATGATA ATCAATGGGCAAAAAGACTATCTTGATGCTACTGGATATCCACAACTAAAAATCAACAAATTTATTCATGAACTTGTTAG AATTTTTTGCATAATAGATACTTACGATGAATTGGTAAATCCAATAATAATAAAAGAAAGCGCCAACCCTTTAGAGACTA TTAAATTCCTAATAGAAAATAGTGGAAAATACTATTGGAACAGAAAAGAGCCTAACGAGCAAGCAAAAAACAAAAAATTT GACATTAATATGCTAGAAAATTTTTTAACAATACTTGCACCTTTTGATTATGGACAAATAGTAAGTGTAAACAAAAAAAA TAATGATGAAAATCTTTTTGAAGCTGCTGTTATTGAATACAAAATGAGCATTATGCCAAATATATCTATAATAAACAAAA AAAACCAGACTTACAAACTAGAAGAAATAATATTAGATCTTGAAAATAAAGAAATTTTAATAAAAGATACAGATGGAAAT TATAAAAAAAATCCATTAAAAAATGTGGACGATTTTATAATAAAAAACAACATTCCAGAATTAAATAAAAATGAAATTCA ACTCATTCTCTTTAGCTATGACAGAAAATCAAAGCCTACAACATTCTCAAAAAAATAA
Upstream 100 bases:
>100_bases TCGCTGTAGCTCAGTTGGTAGAGCATAGGACTGAAAATCCTTGTGTCAGGAGTTCGATTCTCCTCGGCGACATTTATTTA AAGATTAAAAGGATCTCAAA
Downstream 100 bases:
>100_bases GTTTTGATCCCCCATACCTTTTCAAATTATAAACTGAAAATTTGGATGTATTTATGTCCAAATCTTCCCCAAAAGGACAA TGCATAATGATATTAACTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 525; Mature: 525
Protein sequence:
>525_residues MILKKIKQIKDLNQQDVIFARIGNLSKLGTRVNEKIIKILDKGNTPYIPVLKKEEDMSYEDLIKKINEEILNDDLSYLRE KLIDNLKDVYKPFKEDDPIFFTKGKKPLMKINTLMEVEPNQIYWKEILEGSFKILPRHKITSLQKILLEIYHYFDVQKLR TKENLKDKKTLKKLYLYSARRDYEFFKGKVKTEGDSILLHSVDTTIYFLITIANLNKIRSLKNAPRSTMKFFLDKTEYTE FTEFFYAEDMILQAALGSLLHSIGLMHITILENIGNKISLKDKNLKEQHKLKIEYLEKNINIAKNLFRIREDISAITKMI INGQKDYLDATGYPQLKINKFIHELVRIFCIIDTYDELVNPIIIKESANPLETIKFLIENSGKYYWNRKEPNEQAKNKKF DINMLENFLTILAPFDYGQIVSVNKKNNDENLFEAAVIEYKMSIMPNISIINKKNQTYKLEEIILDLENKEILIKDTDGN YKKNPLKNVDDFIIKNNIPELNKNEIQLILFSYDRKSKPTTFSKK
Sequences:
>Translated_525_residues MILKKIKQIKDLNQQDVIFARIGNLSKLGTRVNEKIIKILDKGNTPYIPVLKKEEDMSYEDLIKKINEEILNDDLSYLRE KLIDNLKDVYKPFKEDDPIFFTKGKKPLMKINTLMEVEPNQIYWKEILEGSFKILPRHKITSLQKILLEIYHYFDVQKLR TKENLKDKKTLKKLYLYSARRDYEFFKGKVKTEGDSILLHSVDTTIYFLITIANLNKIRSLKNAPRSTMKFFLDKTEYTE FTEFFYAEDMILQAALGSLLHSIGLMHITILENIGNKISLKDKNLKEQHKLKIEYLEKNINIAKNLFRIREDISAITKMI INGQKDYLDATGYPQLKINKFIHELVRIFCIIDTYDELVNPIIIKESANPLETIKFLIENSGKYYWNRKEPNEQAKNKKF DINMLENFLTILAPFDYGQIVSVNKKNNDENLFEAAVIEYKMSIMPNISIINKKNQTYKLEEIILDLENKEILIKDTDGN YKKNPLKNVDDFIIKNNIPELNKNEIQLILFSYDRKSKPTTFSKK >Mature_525_residues MILKKIKQIKDLNQQDVIFARIGNLSKLGTRVNEKIIKILDKGNTPYIPVLKKEEDMSYEDLIKKINEEILNDDLSYLRE KLIDNLKDVYKPFKEDDPIFFTKGKKPLMKINTLMEVEPNQIYWKEILEGSFKILPRHKITSLQKILLEIYHYFDVQKLR TKENLKDKKTLKKLYLYSARRDYEFFKGKVKTEGDSILLHSVDTTIYFLITIANLNKIRSLKNAPRSTMKFFLDKTEYTE FTEFFYAEDMILQAALGSLLHSIGLMHITILENIGNKISLKDKNLKEQHKLKIEYLEKNINIAKNLFRIREDISAITKMI INGQKDYLDATGYPQLKINKFIHELVRIFCIIDTYDELVNPIIIKESANPLETIKFLIENSGKYYWNRKEPNEQAKNKKF DINMLENFLTILAPFDYGQIVSVNKKNNDENLFEAAVIEYKMSIMPNISIINKKNQTYKLEEIILDLENKEILIKDTDGN YKKNPLKNVDDFIIKNNIPELNKNEIQLILFSYDRKSKPTTFSKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61862; Mature: 61862
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILKKIKQIKDLNQQDVIFARIGNLSKLGTRVNEKIIKILDKGNTPYIPVLKKEEDMSYE CHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHH DLIKKINEEILNDDLSYLREKLIDNLKDVYKPFKEDDPIFFTKGKKPLMKINTLMEVEPN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHEECCCC QIYWKEILEGSFKILPRHKITSLQKILLEIYHYFDVQKLRTKENLKDKKTLKKLYLYSAR HHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC RDYEFFKGKVKTEGDSILLHSVDTTIYFLITIANLNKIRSLKNAPRSTMKFFLDKTEYTE CCHHHHCCEEECCCCEEEEEECCHHEEEEHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHH FTEFFYAEDMILQAALGSLLHSIGLMHITILENIGNKISLKDKNLKEQHKLKIEYLEKNI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHH NIAKNLFRIREDISAITKMIINGQKDYLDATGYPQLKINKFIHELVRIFCIIDTYDELVN HHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC PIIIKESANPLETIKFLIENSGKYYWNRKEPNEQAKNKKFDINMLENFLTILAPFDYGQI CEEEECCCCHHHHHHHHHHCCCCEEECCCCCCHHHCCCCCCHHHHHHHHHHHCCCCCCCE VSVNKKNNDENLFEAAVIEYKMSIMPNISIINKKNQTYKLEEIILDLENKEILIKDTDGN EEECCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCEEHHHHHHCCCCCEEEEEECCCC YKKNPLKNVDDFIIKNNIPELNKNEIQLILFSYDRKSKPTTFSKK CCCCCCCCHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCC >Mature Secondary Structure MILKKIKQIKDLNQQDVIFARIGNLSKLGTRVNEKIIKILDKGNTPYIPVLKKEEDMSYE CHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHH DLIKKINEEILNDDLSYLREKLIDNLKDVYKPFKEDDPIFFTKGKKPLMKINTLMEVEPN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHEECCCC QIYWKEILEGSFKILPRHKITSLQKILLEIYHYFDVQKLRTKENLKDKKTLKKLYLYSAR HHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC RDYEFFKGKVKTEGDSILLHSVDTTIYFLITIANLNKIRSLKNAPRSTMKFFLDKTEYTE CCHHHHCCEEECCCCEEEEEECCHHEEEEHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHH FTEFFYAEDMILQAALGSLLHSIGLMHITILENIGNKISLKDKNLKEQHKLKIEYLEKNI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHH NIAKNLFRIREDISAITKMIINGQKDYLDATGYPQLKINKFIHELVRIFCIIDTYDELVN HHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC PIIIKESANPLETIKFLIENSGKYYWNRKEPNEQAKNKKFDINMLENFLTILAPFDYGQI CEEEECCCCHHHHHHHHHHCCCCEEECCCCCCHHHCCCCCCHHHHHHHHHHHCCCCCCCE VSVNKKNNDENLFEAAVIEYKMSIMPNISIINKKNQTYKLEEIILDLENKEILIKDTDGN EEECCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCEEHHHHHHCCCCCEEEEEECCCC YKKNPLKNVDDFIIKNNIPELNKNEIQLILFSYDRKSKPTTFSKK CCCCCCCCHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA