| Definition | Borrelia garinii PBi chromosome chromosome linear, complete sequence. |
|---|---|
| Accession | NC_006156 |
| Length | 904,246 |
Click here to switch to the map view.
The map label for this gene is yuiD [H]
Identifier: 51598331
GI number: 51598331
Start: 65123
End: 65584
Strand: Direct
Name: yuiD [H]
Synonym: BG0069
Alternate gene names: 51598331
Gene position: 65123-65584 (Clockwise)
Preceding gene: 51598330
Following gene: 51598332
Centisome position: 7.2
GC content: 33.77
Gene sequence:
>462_bases ATGATAAGGGCATTGCTTACCAACGATCTTTTTTTATCTTGTTTTGTATCAGGAATTTCTGCTCAAGTAATTAAATATGG TATCCAAACTGTAAAAACAAGAAAGTTAAAACTAACTCCAGTGCATCTTTTAAAAAAAATTTTTCTAGAAACAGGGGGCA TGCCAAGCAGTCATTCATCAACAGTCACTGCGCTTTCAACCTCAATTGCAATAACTGAAGGGATAAGGCACAATTTTATA ATAGCTCTTGCCTTTGCTCTTATTACAATAAGAGATTCTTTCGGAGTAAGATATATGTCTGGGGTTCAGGCAGAATATTT GAATGCATTGTCAGAAAAATTAAAAAAAGAAATAAAAATTGGCCCCACAGAAATAAAAGTGGTCAAGGGACACAAAAAGA AAGAGGTTCTAACGGGCATAATAATAGGAATAGTCTCTGCATATATTGTGTGCTATTTATAG
Upstream 100 bases:
>100_bases TTGGAAGCGATGACTTGGATGTCATTGGTGTAGATAAAAATGAAAAAGAATACGCGATAATAAAGGCTGGCAAATTTGCA ATATAAAAGGGGGTTTAATA
Downstream 100 bases:
>100_bases TACAGGGAAAAAATAAATGTTGCGCTTTTTAAGTCTTTTGTGTTTAATTGCAACAATGCCACTTATCAATTCATGCGATG TAGCTCAATTTGGAGATTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MIRALLTNDLFLSCFVSGISAQVIKYGIQTVKTRKLKLTPVHLLKKIFLETGGMPSSHSSTVTALSTSIAITEGIRHNFI IALAFALITIRDSFGVRYMSGVQAEYLNALSEKLKKEIKIGPTEIKVVKGHKKKEVLTGIIIGIVSAYIVCYL
Sequences:
>Translated_153_residues MIRALLTNDLFLSCFVSGISAQVIKYGIQTVKTRKLKLTPVHLLKKIFLETGGMPSSHSSTVTALSTSIAITEGIRHNFI IALAFALITIRDSFGVRYMSGVQAEYLNALSEKLKKEIKIGPTEIKVVKGHKKKEVLTGIIIGIVSAYIVCYL >Mature_153_residues MIRALLTNDLFLSCFVSGISAQVIKYGIQTVKTRKLKLTPVHLLKKIFLETGGMPSSHSSTVTALSTSIAITEGIRHNFI IALAFALITIRDSFGVRYMSGVQAEYLNALSEKLKKEIKIGPTEIKVVKGHKKKEVLTGIIIGIVSAYIVCYL
Specific function: Unknown
COG id: COG1963
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003832 [H]
Pfam domain/function: PF02681 DUF212 [H]
EC number: NA
Molecular weight: Translated: 16781; Mature: 16781
Theoretical pI: Translated: 10.44; Mature: 10.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRALLTNDLFLSCFVSGISAQVIKYGIQTVKTRKLKLTPVHLLKKIFLETGGMPSSHSS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECHHHHHHHHHHHCCCCCCCCCC TVTALSTSIAITEGIRHNFIIALAFALITIRDSFGVRYMSGVQAEYLNALSEKLKKEIKI HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHCHHHHHHHHHHHHHHHHHCC GPTEIKVVKGHKKKEVLTGIIIGIVSAYIVCYL CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIRALLTNDLFLSCFVSGISAQVIKYGIQTVKTRKLKLTPVHLLKKIFLETGGMPSSHSS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECHHHHHHHHHHHCCCCCCCCCC TVTALSTSIAITEGIRHNFIIALAFALITIRDSFGVRYMSGVQAEYLNALSEKLKKEIKI HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHCHHHHHHHHHHHHHHHHHCC GPTEIKVVKGHKKKEVLTGIIIGIVSAYIVCYL CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]