Definition Borrelia garinii PBi chromosome chromosome linear, complete sequence.
Accession NC_006156
Length 904,246

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The map label for this gene is 51598330

Identifier: 51598330

GI number: 51598330

Start: 63870

End: 65108

Strand: Direct

Name: 51598330

Synonym: BG0068

Alternate gene names: NA

Gene position: 63870-65108 (Clockwise)

Preceding gene: 51598329

Following gene: 51598331

Centisome position: 7.06

GC content: 29.86

Gene sequence:

>1239_bases
ATGGAGAAAGATTTAATAAAATATGCAGAACTTATAATTTTAAAGGGAATTAATTTACAAAAAAATCAATGTGTTCTAAT
TCAAGGTTCAATCGAAAATTACAATTTTTTGAAAATATTAGCAAAAAAAGCTTATGAACATGGAGCTAAGTATGTCAAAC
TAAATATTAAAGACATTGATATTTTAAAATCAAGGTTAAAATTTTCACAAGAGAAAAGCTTAGAATTTATTCCAAATTTC
GAAAAGAGTTTTTTAGAAGAAATGGTTCAAGATAAATGGGCAAGAATAAACGTCGATGATACAGAAAATTTTGAAGACTT
AAAAGAGAGCATTGGTCAAAAAATGTCAATTTATCAAAAAGCATTAAATCTGGCAAGTAAAACCTTATCACAAGCAATAA
TGAGCAACGAAATAGCTTGGTGTGTTGTTTGTTCGCCAGGTCCAAAATGGGCTTCCAAGGTTTTAAATAAAAAAGAAGGA
AATGAAACCTTAGAAGAATTTTTCAAAATACAAAAGAAAATATTGTTACTTGATAGAGAAAATCCAATAAAAGAATGGGA
ATCCCATGGAGAAAGACTTCACAAAAGATGTAAAATATTAAATGAACTTAACCTAGAAAAGGTAATTTTTAAAAACGAAA
AAACAAACCTAGAAGTATATCTACTTGAAACTTCCCTATGGACAGGTGGAAGCGAAAAAATCAAAGAAACAGAAATAGAA
TTTAATGCCAATATGCCAACAGAAGAAGTTTTTACAACTCCAAACTATAAAAAAACAAAAGGAATTGTTTATGCCACCCG
CCCTGTCATGGTGCTTGGAACATTAATATCTGGAATATGGTTAAAATTCGAAAATGGAAAAGTTGTTGACTTTGGCTGTA
GTGATGAGAAACAAAAAGAAATATTAAAATCACACATTGAAACCGACATTCAAGCAAAATATATAGGAGAAGTAGCACTA
GTTGACAGCAGTTCCCTTATTTATCAAAGCAATCTTATTTTTTACAGCACATTGTATGATGAGAATGCAAGTTGCCATAT
AGCACTAGGAGCTGCATATCCATCTTGTTTAAGTAACGAAGAAGATTTAAAAACTGACACAGATAAACTAAATTACGGAT
GCAATGTTTCATTAATACATACAGATTTAATGATTGGAAGCGATGACTTGGATGTCATTGGTGTAGATAAAAATGAAAAA
GAATACGCGATAATAAAGGCTGGCAAATTTGCAATATAA

Upstream 100 bases:

>100_bases
AATGCTACCTTACTTAGAAGTAATAGGGACAAATGATGAAGAGGCTGTTGCAAATTACATTAATGATAACGTTTTAGAAG
AACCTATTCGGGAGGAATAA

Downstream 100 bases:

>100_bases
AAGGGGGTTTAATAATGATAAGGGCATTGCTTACCAACGATCTTTTTTTATCTTGTTTTGTATCAGGAATTTCTGCTCAA
GTAATTAAATATGGTATCCA

Product: aminopeptidase II

Products: NA

Alternate protein names: Aminopeptidase II; AP-II [H]

Number of amino acids: Translated: 412; Mature: 412

Protein sequence:

>412_residues
MEKDLIKYAELIILKGINLQKNQCVLIQGSIENYNFLKILAKKAYEHGAKYVKLNIKDIDILKSRLKFSQEKSLEFIPNF
EKSFLEEMVQDKWARINVDDTENFEDLKESIGQKMSIYQKALNLASKTLSQAIMSNEIAWCVVCSPGPKWASKVLNKKEG
NETLEEFFKIQKKILLLDRENPIKEWESHGERLHKRCKILNELNLEKVIFKNEKTNLEVYLLETSLWTGGSEKIKETEIE
FNANMPTEEVFTTPNYKKTKGIVYATRPVMVLGTLISGIWLKFENGKVVDFGCSDEKQKEILKSHIETDIQAKYIGEVAL
VDSSSLIYQSNLIFYSTLYDENASCHIALGAAYPSCLSNEEDLKTDTDKLNYGCNVSLIHTDLMIGSDDLDVIGVDKNEK
EYAIIKAGKFAI

Sequences:

>Translated_412_residues
MEKDLIKYAELIILKGINLQKNQCVLIQGSIENYNFLKILAKKAYEHGAKYVKLNIKDIDILKSRLKFSQEKSLEFIPNF
EKSFLEEMVQDKWARINVDDTENFEDLKESIGQKMSIYQKALNLASKTLSQAIMSNEIAWCVVCSPGPKWASKVLNKKEG
NETLEEFFKIQKKILLLDRENPIKEWESHGERLHKRCKILNELNLEKVIFKNEKTNLEVYLLETSLWTGGSEKIKETEIE
FNANMPTEEVFTTPNYKKTKGIVYATRPVMVLGTLISGIWLKFENGKVVDFGCSDEKQKEILKSHIETDIQAKYIGEVAL
VDSSSLIYQSNLIFYSTLYDENASCHIALGAAYPSCLSNEEDLKTDTDKLNYGCNVSLIHTDLMIGSDDLDVIGVDKNEK
EYAIIKAGKFAI
>Mature_412_residues
MEKDLIKYAELIILKGINLQKNQCVLIQGSIENYNFLKILAKKAYEHGAKYVKLNIKDIDILKSRLKFSQEKSLEFIPNF
EKSFLEEMVQDKWARINVDDTENFEDLKESIGQKMSIYQKALNLASKTLSQAIMSNEIAWCVVCSPGPKWASKVLNKKEG
NETLEEFFKIQKKILLLDRENPIKEWESHGERLHKRCKILNELNLEKVIFKNEKTNLEVYLLETSLWTGGSEKIKETEIE
FNANMPTEEVFTTPNYKKTKGIVYATRPVMVLGTLISGIWLKFENGKVVDFGCSDEKQKEILKSHIETDIQAKYIGEVAL
VDSSSLIYQSNLIFYSTLYDENASCHIALGAAYPSCLSNEEDLKTDTDKLNYGCNVSLIHTDLMIGSDDLDVIGVDKNEK
EYAIIKAGKFAI

Specific function: Broad specificity metal-dependent exopeptidase, releasing all N-terminal amino acids [H]

COG id: COG2309

COG function: function code E; Leucyl aminopeptidase (aminopeptidase T)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M29 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000787 [H]

Pfam domain/function: PF02073 Peptidase_M29 [H]

EC number: NA

Molecular weight: Translated: 47077; Mature: 47077

Theoretical pI: Translated: 5.43; Mature: 5.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKDLIKYAELIILKGINLQKNQCVLIQGSIENYNFLKILAKKAYEHGAKYVKLNIKDID
CCHHHHHHHHHHHEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHH
ILKSRLKFSQEKSLEFIPNFEKSFLEEMVQDKWARINVDDTENFEDLKESIGQKMSIYQK
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHH
ALNLASKTLSQAIMSNEIAWCVVCSPGPKWASKVLNKKEGNETLEEFFKIQKKILLLDRE
HHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHEEEEECC
NPIKEWESHGERLHKRCKILNELNLEKVIFKNEKTNLEVYLLETSLWTGGSEKIKETEIE
CCHHHHHHHHHHHHHHHHHHHHCCHHHEEEECCCCCEEEEEEEEEECCCCCCCCEEEEEE
FNANMPTEEVFTTPNYKKTKGIVYATRPVMVLGTLISGIWLKFENGKVVDFGCSDEKQKE
ECCCCCHHHHCCCCCCCCCCCEEEECCHHHHHHHHHHHEEEEECCCEEEEECCCCHHHHH
ILKSHIETDIQAKYIGEVALVDSSSLIYQSNLIFYSTLYDENASCHIALGAAYPSCLSNE
HHHHHHCCCCCHHEECEEEEECCCCEEEECCEEEEEEEECCCCEEEEEEECCCHHHCCCC
EDLKTDTDKLNYGCNVSLIHTDLMIGSDDLDVIGVDKNEKEYAIIKAGKFAI
HHCCCCHHHCCCCCCEEEEEEEEEECCCCCEEEECCCCCCCEEEEECCCCCC
>Mature Secondary Structure
MEKDLIKYAELIILKGINLQKNQCVLIQGSIENYNFLKILAKKAYEHGAKYVKLNIKDID
CCHHHHHHHHHHHEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHH
ILKSRLKFSQEKSLEFIPNFEKSFLEEMVQDKWARINVDDTENFEDLKESIGQKMSIYQK
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHH
ALNLASKTLSQAIMSNEIAWCVVCSPGPKWASKVLNKKEGNETLEEFFKIQKKILLLDRE
HHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHEEEEECC
NPIKEWESHGERLHKRCKILNELNLEKVIFKNEKTNLEVYLLETSLWTGGSEKIKETEIE
CCHHHHHHHHHHHHHHHHHHHHCCHHHEEEECCCCCEEEEEEEEEECCCCCCCCEEEEEE
FNANMPTEEVFTTPNYKKTKGIVYATRPVMVLGTLISGIWLKFENGKVVDFGCSDEKQKE
ECCCCCHHHHCCCCCCCCCCCEEEECCHHHHHHHHHHHEEEEECCCEEEEECCCCHHHHH
ILKSHIETDIQAKYIGEVALVDSSSLIYQSNLIFYSTLYDENASCHIALGAAYPSCLSNE
HHHHHHCCCCCHHEECEEEEECCCCEEEECCEEEEEEEECCCCEEEEEEECCCHHHCCCC
EDLKTDTDKLNYGCNVSLIHTDLMIGSDDLDVIGVDKNEKEYAIIKAGKFAI
HHCCCCHHHCCCCCCEEEEEEEEEECCCCCEEEECCCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9362117; 938681 [H]