| Definition | Borrelia garinii PBi chromosome chromosome linear, complete sequence. |
|---|---|
| Accession | NC_006156 |
| Length | 904,246 |
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The map label for this gene is 51598330
Identifier: 51598330
GI number: 51598330
Start: 63870
End: 65108
Strand: Direct
Name: 51598330
Synonym: BG0068
Alternate gene names: NA
Gene position: 63870-65108 (Clockwise)
Preceding gene: 51598329
Following gene: 51598331
Centisome position: 7.06
GC content: 29.86
Gene sequence:
>1239_bases ATGGAGAAAGATTTAATAAAATATGCAGAACTTATAATTTTAAAGGGAATTAATTTACAAAAAAATCAATGTGTTCTAAT TCAAGGTTCAATCGAAAATTACAATTTTTTGAAAATATTAGCAAAAAAAGCTTATGAACATGGAGCTAAGTATGTCAAAC TAAATATTAAAGACATTGATATTTTAAAATCAAGGTTAAAATTTTCACAAGAGAAAAGCTTAGAATTTATTCCAAATTTC GAAAAGAGTTTTTTAGAAGAAATGGTTCAAGATAAATGGGCAAGAATAAACGTCGATGATACAGAAAATTTTGAAGACTT AAAAGAGAGCATTGGTCAAAAAATGTCAATTTATCAAAAAGCATTAAATCTGGCAAGTAAAACCTTATCACAAGCAATAA TGAGCAACGAAATAGCTTGGTGTGTTGTTTGTTCGCCAGGTCCAAAATGGGCTTCCAAGGTTTTAAATAAAAAAGAAGGA AATGAAACCTTAGAAGAATTTTTCAAAATACAAAAGAAAATATTGTTACTTGATAGAGAAAATCCAATAAAAGAATGGGA ATCCCATGGAGAAAGACTTCACAAAAGATGTAAAATATTAAATGAACTTAACCTAGAAAAGGTAATTTTTAAAAACGAAA AAACAAACCTAGAAGTATATCTACTTGAAACTTCCCTATGGACAGGTGGAAGCGAAAAAATCAAAGAAACAGAAATAGAA TTTAATGCCAATATGCCAACAGAAGAAGTTTTTACAACTCCAAACTATAAAAAAACAAAAGGAATTGTTTATGCCACCCG CCCTGTCATGGTGCTTGGAACATTAATATCTGGAATATGGTTAAAATTCGAAAATGGAAAAGTTGTTGACTTTGGCTGTA GTGATGAGAAACAAAAAGAAATATTAAAATCACACATTGAAACCGACATTCAAGCAAAATATATAGGAGAAGTAGCACTA GTTGACAGCAGTTCCCTTATTTATCAAAGCAATCTTATTTTTTACAGCACATTGTATGATGAGAATGCAAGTTGCCATAT AGCACTAGGAGCTGCATATCCATCTTGTTTAAGTAACGAAGAAGATTTAAAAACTGACACAGATAAACTAAATTACGGAT GCAATGTTTCATTAATACATACAGATTTAATGATTGGAAGCGATGACTTGGATGTCATTGGTGTAGATAAAAATGAAAAA GAATACGCGATAATAAAGGCTGGCAAATTTGCAATATAA
Upstream 100 bases:
>100_bases AATGCTACCTTACTTAGAAGTAATAGGGACAAATGATGAAGAGGCTGTTGCAAATTACATTAATGATAACGTTTTAGAAG AACCTATTCGGGAGGAATAA
Downstream 100 bases:
>100_bases AAGGGGGTTTAATAATGATAAGGGCATTGCTTACCAACGATCTTTTTTTATCTTGTTTTGTATCAGGAATTTCTGCTCAA GTAATTAAATATGGTATCCA
Product: aminopeptidase II
Products: NA
Alternate protein names: Aminopeptidase II; AP-II [H]
Number of amino acids: Translated: 412; Mature: 412
Protein sequence:
>412_residues MEKDLIKYAELIILKGINLQKNQCVLIQGSIENYNFLKILAKKAYEHGAKYVKLNIKDIDILKSRLKFSQEKSLEFIPNF EKSFLEEMVQDKWARINVDDTENFEDLKESIGQKMSIYQKALNLASKTLSQAIMSNEIAWCVVCSPGPKWASKVLNKKEG NETLEEFFKIQKKILLLDRENPIKEWESHGERLHKRCKILNELNLEKVIFKNEKTNLEVYLLETSLWTGGSEKIKETEIE FNANMPTEEVFTTPNYKKTKGIVYATRPVMVLGTLISGIWLKFENGKVVDFGCSDEKQKEILKSHIETDIQAKYIGEVAL VDSSSLIYQSNLIFYSTLYDENASCHIALGAAYPSCLSNEEDLKTDTDKLNYGCNVSLIHTDLMIGSDDLDVIGVDKNEK EYAIIKAGKFAI
Sequences:
>Translated_412_residues MEKDLIKYAELIILKGINLQKNQCVLIQGSIENYNFLKILAKKAYEHGAKYVKLNIKDIDILKSRLKFSQEKSLEFIPNF EKSFLEEMVQDKWARINVDDTENFEDLKESIGQKMSIYQKALNLASKTLSQAIMSNEIAWCVVCSPGPKWASKVLNKKEG NETLEEFFKIQKKILLLDRENPIKEWESHGERLHKRCKILNELNLEKVIFKNEKTNLEVYLLETSLWTGGSEKIKETEIE FNANMPTEEVFTTPNYKKTKGIVYATRPVMVLGTLISGIWLKFENGKVVDFGCSDEKQKEILKSHIETDIQAKYIGEVAL VDSSSLIYQSNLIFYSTLYDENASCHIALGAAYPSCLSNEEDLKTDTDKLNYGCNVSLIHTDLMIGSDDLDVIGVDKNEK EYAIIKAGKFAI >Mature_412_residues MEKDLIKYAELIILKGINLQKNQCVLIQGSIENYNFLKILAKKAYEHGAKYVKLNIKDIDILKSRLKFSQEKSLEFIPNF EKSFLEEMVQDKWARINVDDTENFEDLKESIGQKMSIYQKALNLASKTLSQAIMSNEIAWCVVCSPGPKWASKVLNKKEG NETLEEFFKIQKKILLLDRENPIKEWESHGERLHKRCKILNELNLEKVIFKNEKTNLEVYLLETSLWTGGSEKIKETEIE FNANMPTEEVFTTPNYKKTKGIVYATRPVMVLGTLISGIWLKFENGKVVDFGCSDEKQKEILKSHIETDIQAKYIGEVAL VDSSSLIYQSNLIFYSTLYDENASCHIALGAAYPSCLSNEEDLKTDTDKLNYGCNVSLIHTDLMIGSDDLDVIGVDKNEK EYAIIKAGKFAI
Specific function: Broad specificity metal-dependent exopeptidase, releasing all N-terminal amino acids [H]
COG id: COG2309
COG function: function code E; Leucyl aminopeptidase (aminopeptidase T)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M29 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000787 [H]
Pfam domain/function: PF02073 Peptidase_M29 [H]
EC number: NA
Molecular weight: Translated: 47077; Mature: 47077
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKDLIKYAELIILKGINLQKNQCVLIQGSIENYNFLKILAKKAYEHGAKYVKLNIKDID CCHHHHHHHHHHHEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHH ILKSRLKFSQEKSLEFIPNFEKSFLEEMVQDKWARINVDDTENFEDLKESIGQKMSIYQK HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHH ALNLASKTLSQAIMSNEIAWCVVCSPGPKWASKVLNKKEGNETLEEFFKIQKKILLLDRE HHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHEEEEECC NPIKEWESHGERLHKRCKILNELNLEKVIFKNEKTNLEVYLLETSLWTGGSEKIKETEIE CCHHHHHHHHHHHHHHHHHHHHCCHHHEEEECCCCCEEEEEEEEEECCCCCCCCEEEEEE FNANMPTEEVFTTPNYKKTKGIVYATRPVMVLGTLISGIWLKFENGKVVDFGCSDEKQKE ECCCCCHHHHCCCCCCCCCCCEEEECCHHHHHHHHHHHEEEEECCCEEEEECCCCHHHHH ILKSHIETDIQAKYIGEVALVDSSSLIYQSNLIFYSTLYDENASCHIALGAAYPSCLSNE HHHHHHCCCCCHHEECEEEEECCCCEEEECCEEEEEEEECCCCEEEEEEECCCHHHCCCC EDLKTDTDKLNYGCNVSLIHTDLMIGSDDLDVIGVDKNEKEYAIIKAGKFAI HHCCCCHHHCCCCCCEEEEEEEEEECCCCCEEEECCCCCCCEEEEECCCCCC >Mature Secondary Structure MEKDLIKYAELIILKGINLQKNQCVLIQGSIENYNFLKILAKKAYEHGAKYVKLNIKDID CCHHHHHHHHHHHEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHH ILKSRLKFSQEKSLEFIPNFEKSFLEEMVQDKWARINVDDTENFEDLKESIGQKMSIYQK HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHH ALNLASKTLSQAIMSNEIAWCVVCSPGPKWASKVLNKKEGNETLEEFFKIQKKILLLDRE HHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHEEEEECC NPIKEWESHGERLHKRCKILNELNLEKVIFKNEKTNLEVYLLETSLWTGGSEKIKETEIE CCHHHHHHHHHHHHHHHHHHHHCCHHHEEEECCCCCEEEEEEEEEECCCCCCCCEEEEEE FNANMPTEEVFTTPNYKKTKGIVYATRPVMVLGTLISGIWLKFENGKVVDFGCSDEKQKE ECCCCCHHHHCCCCCCCCCCCEEEECCHHHHHHHHHHHEEEEECCCEEEEECCCCHHHHH ILKSHIETDIQAKYIGEVALVDSSSLIYQSNLIFYSTLYDENASCHIALGAAYPSCLSNE HHHHHHCCCCCHHEECEEEEECCCCEEEECCEEEEEEEECCCCEEEEEEECCCHHHCCCC EDLKTDTDKLNYGCNVSLIHTDLMIGSDDLDVIGVDKNEKEYAIIKAGKFAI HHCCCCHHHCCCCCCEEEEEEEEEECCCCCEEEECCCCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9362117; 938681 [H]