Definition Borrelia garinii PBi chromosome chromosome linear, complete sequence.
Accession NC_006156
Length 904,246

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The map label for this gene is yuiD [H]

Identifier: 51598331

GI number: 51598331

Start: 65123

End: 65584

Strand: Direct

Name: yuiD [H]

Synonym: BG0069

Alternate gene names: 51598331

Gene position: 65123-65584 (Clockwise)

Preceding gene: 51598330

Following gene: 51598332

Centisome position: 7.2

GC content: 33.77

Gene sequence:

>462_bases
ATGATAAGGGCATTGCTTACCAACGATCTTTTTTTATCTTGTTTTGTATCAGGAATTTCTGCTCAAGTAATTAAATATGG
TATCCAAACTGTAAAAACAAGAAAGTTAAAACTAACTCCAGTGCATCTTTTAAAAAAAATTTTTCTAGAAACAGGGGGCA
TGCCAAGCAGTCATTCATCAACAGTCACTGCGCTTTCAACCTCAATTGCAATAACTGAAGGGATAAGGCACAATTTTATA
ATAGCTCTTGCCTTTGCTCTTATTACAATAAGAGATTCTTTCGGAGTAAGATATATGTCTGGGGTTCAGGCAGAATATTT
GAATGCATTGTCAGAAAAATTAAAAAAAGAAATAAAAATTGGCCCCACAGAAATAAAAGTGGTCAAGGGACACAAAAAGA
AAGAGGTTCTAACGGGCATAATAATAGGAATAGTCTCTGCATATATTGTGTGCTATTTATAG

Upstream 100 bases:

>100_bases
TTGGAAGCGATGACTTGGATGTCATTGGTGTAGATAAAAATGAAAAAGAATACGCGATAATAAAGGCTGGCAAATTTGCA
ATATAAAAGGGGGTTTAATA

Downstream 100 bases:

>100_bases
TACAGGGAAAAAATAAATGTTGCGCTTTTTAAGTCTTTTGTGTTTAATTGCAACAATGCCACTTATCAATTCATGCGATG
TAGCTCAATTTGGAGATTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MIRALLTNDLFLSCFVSGISAQVIKYGIQTVKTRKLKLTPVHLLKKIFLETGGMPSSHSSTVTALSTSIAITEGIRHNFI
IALAFALITIRDSFGVRYMSGVQAEYLNALSEKLKKEIKIGPTEIKVVKGHKKKEVLTGIIIGIVSAYIVCYL

Sequences:

>Translated_153_residues
MIRALLTNDLFLSCFVSGISAQVIKYGIQTVKTRKLKLTPVHLLKKIFLETGGMPSSHSSTVTALSTSIAITEGIRHNFI
IALAFALITIRDSFGVRYMSGVQAEYLNALSEKLKKEIKIGPTEIKVVKGHKKKEVLTGIIIGIVSAYIVCYL
>Mature_153_residues
MIRALLTNDLFLSCFVSGISAQVIKYGIQTVKTRKLKLTPVHLLKKIFLETGGMPSSHSSTVTALSTSIAITEGIRHNFI
IALAFALITIRDSFGVRYMSGVQAEYLNALSEKLKKEIKIGPTEIKVVKGHKKKEVLTGIIIGIVSAYIVCYL

Specific function: Unknown

COG id: COG1963

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003832 [H]

Pfam domain/function: PF02681 DUF212 [H]

EC number: NA

Molecular weight: Translated: 16781; Mature: 16781

Theoretical pI: Translated: 10.44; Mature: 10.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRALLTNDLFLSCFVSGISAQVIKYGIQTVKTRKLKLTPVHLLKKIFLETGGMPSSHSS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECHHHHHHHHHHHCCCCCCCCCC
TVTALSTSIAITEGIRHNFIIALAFALITIRDSFGVRYMSGVQAEYLNALSEKLKKEIKI
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHCHHHHHHHHHHHHHHHHHCC
GPTEIKVVKGHKKKEVLTGIIIGIVSAYIVCYL
CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIRALLTNDLFLSCFVSGISAQVIKYGIQTVKTRKLKLTPVHLLKKIFLETGGMPSSHSS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECHHHHHHHHHHHCCCCCCCCCC
TVTALSTSIAITEGIRHNFIIALAFALITIRDSFGVRYMSGVQAEYLNALSEKLKKEIKI
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHCHHHHHHHHHHHHHHHHHCC
GPTEIKVVKGHKKKEVLTGIIIGIVSAYIVCYL
CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]