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The map label for this gene is rsmE1 [H]

Identifier: 51598323

GI number: 51598323

Start: 57103

End: 57819

Strand: Direct

Name: rsmE1 [H]

Synonym: BG0061

Alternate gene names: 51598323

Gene position: 57103-57819 (Clockwise)

Preceding gene: 51598314

Following gene: 51598329

Centisome position: 6.31

GC content: 26.92

Gene sequence:

>717_bases
ATGAATCTAATGTTAATAACTTTTAATGAATTTAAAACAGGAATTTCACTAAATGACACCAGGGCAGAGCATCTTGTTAA
AATCTTAAAATTAAAAGATAACGACAAATTTAAATTTGGCATTCTTGGAGAAAGAAACATTTACCATTGCATTTACAAAA
AAGATAAAAAACTATTTTTCAAGAAAATCTTTAAAATAGAAGAATCTAATAAACTCAAAAAATTAAATGTACTAATTGGG
ATGATAAGACCACTTGTCGCCAGAAGAATCATAAAAGAACTTGCTAGTATTGGAATATACGAAATAATTTTTTTTAACAC
TGAGCTTACTCAAAAGTCGTATTTAAATTCTAAAATCTTTAAAAATAATGATTACGAAAAACATTTAATAGCCGGAGCAA
TGCAAGGAGGAACAACATATTTGCCAAAAATAAAAATTATGAAAAATTTAAAGGAAAGCCTTAAATATATTGAACAAGAA
AATTTTGAAATAAAAATATTGCTTGAAAAAGATAGTAAAAAAAAATTAATTGATATAGAGCAAATAAACAACGCAACCAT
TATTGTGGGACCCGAGAGGGGATTTACAGAAAAAGAGAAACAATTAATAACGCAATATAATTTTTCCCCTTGCAGCATAT
CATCAAACATCCTAAGAACAGAAACAGCCATCATTGCTGCATCTATTATTACTGCATCAAAACTAATTAATGTGTGA

Upstream 100 bases:

>100_bases
ATCTTCTTTGGTTAAAGAAACAGCCATATATTATACATGCCCCCCTATCGACTTAAAATTATATCACAAATACAATATTA
ATAATAAGGAATTATAAGAA

Downstream 100 bases:

>100_bases
TTTTATATTAAAAGTTTTTTTATTACTTTAAGTCAATCCATTTAAACACAATCAATTTATAACTGTTTGATTTATAAGCT
TATCATATATATAAAGTTCA

Product: 16S ribosomal RNA methyltransferase RsmE

Products: NA

Alternate protein names: 16S rRNA m3U1498 methyltransferase 1 [H]

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MNLMLITFNEFKTGISLNDTRAEHLVKILKLKDNDKFKFGILGERNIYHCIYKKDKKLFFKKIFKIEESNKLKKLNVLIG
MIRPLVARRIIKELASIGIYEIIFFNTELTQKSYLNSKIFKNNDYEKHLIAGAMQGGTTYLPKIKIMKNLKESLKYIEQE
NFEIKILLEKDSKKKLIDIEQINNATIIVGPERGFTEKEKQLITQYNFSPCSISSNILRTETAIIAASIITASKLINV

Sequences:

>Translated_238_residues
MNLMLITFNEFKTGISLNDTRAEHLVKILKLKDNDKFKFGILGERNIYHCIYKKDKKLFFKKIFKIEESNKLKKLNVLIG
MIRPLVARRIIKELASIGIYEIIFFNTELTQKSYLNSKIFKNNDYEKHLIAGAMQGGTTYLPKIKIMKNLKESLKYIEQE
NFEIKILLEKDSKKKLIDIEQINNATIIVGPERGFTEKEKQLITQYNFSPCSISSNILRTETAIIAASIITASKLINV
>Mature_238_residues
MNLMLITFNEFKTGISLNDTRAEHLVKILKLKDNDKFKFGILGERNIYHCIYKKDKKLFFKKIFKIEESNKLKKLNVLIG
MIRPLVARRIIKELASIGIYEIIFFNTELTQKSYLNSKIFKNNDYEKHLIAGAMQGGTTYLPKIKIMKNLKESLKYIEQE
NFEIKILLEKDSKKKLIDIEQINNATIIVGPERGFTEKEKQLITQYNFSPCSISSNILRTETAIIAASIITASKLINV

Specific function: Specifically methylates the uridine in position 1498 of 16S rRNA in the fully assembled 30S ribosomal subunit [H]

COG id: COG1385

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RNA methyltransferase RsmE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006700 [H]

Pfam domain/function: PF04452 Methyltrans_RNA [H]

EC number: =2.1.1.193 [H]

Molecular weight: Translated: 27558; Mature: 27558

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLMLITFNEFKTGISLNDTRAEHLVKILKLKDNDKFKFGILGERNIYHCIYKKDKKLFF
CEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEECCCHHHHH
KKIFKIEESNKLKKLNVLIGMIRPLVARRIIKELASIGIYEIIFFNTELTQKSYLNSKIF
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCHHHHHHHCCHHH
KNNDYEKHLIAGAMQGGTTYLPKIKIMKNLKESLKYIEQENFEIKILLEKDSKKKLIDIE
CCCCCHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEHH
QINNATIIVGPERGFTEKEKQLITQYNFSPCSISSNILRTETAIIAASIITASKLINV
HCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNLMLITFNEFKTGISLNDTRAEHLVKILKLKDNDKFKFGILGERNIYHCIYKKDKKLFF
CEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEECCCHHHHH
KKIFKIEESNKLKKLNVLIGMIRPLVARRIIKELASIGIYEIIFFNTELTQKSYLNSKIF
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCHHHHHHHCCHHH
KNNDYEKHLIAGAMQGGTTYLPKIKIMKNLKESLKYIEQENFEIKILLEKDSKKKLIDIE
CCCCCHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEHH
QINNATIIVGPERGFTEKEKQLITQYNFSPCSISSNILRTETAIIAASIITASKLINV
HCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]