Definition Borrelia garinii PBi chromosome chromosome linear, complete sequence.
Accession NC_006156
Length 904,246

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The map label for this gene is 51598312

Identifier: 51598312

GI number: 51598312

Start: 47758

End: 48447

Strand: Direct

Name: 51598312

Synonym: BG0050

Alternate gene names: NA

Gene position: 47758-48447 (Clockwise)

Preceding gene: 51598311

Following gene: 51598314

Centisome position: 5.28

GC content: 24.06

Gene sequence:

>690_bases
ATGTTTGATTTAAGCTTGTGGATAGGAGTTCTTCTCTTTACATATATAACATTAGGGATTCTTTACCGATTTTTCGGAAA
ATCTGGCCTTTTTTGTTTCAATGCAATTATTTCAACAATATCAAATATTATAATACTAAGAAATGTAAAAACATTTGGAA
TGTCCTTAAATTTATCAGGCATTACTTTTTTATCAGCATTATTCTCCCTAAACTTAATGGTAGAAAAATATAATAAAAAA
GAAGCAACAAATTCTGTAATATTGGGTCTTTTGTTAAACATAACTTTTACAATTATGATTAATTTTATGATAGTATTCAA
TCATAACAAATTAGACACCTCAGATATTCATTTTAAAATTTTATTCAACAACTTTACATACATTTTAACAATATTAATTG
GAACTTATGTGTTTTTTCTATCGCAATATATAAACATCTTGCTATATGATTACTTTAAACAAATAAAAATAAAATCTTTA
TGGATCATTCATCCTCTATCAAGGCTAATTTCTGGATATCTGGCTAATTTGCTAGTTTCAATATCTATAACTACAATACT
TAAATTCTACCCTGAAGTAAAAAATATCGAACTTATAGAAGGTTCTCTAATTTTTACATTAATGATAATTACAATCGATA
CCATTTTTTATCTATTTTTAAATTCTTGGAAAAAAATAAGAGAAGTTTAA

Upstream 100 bases:

>100_bases
AAATATATAAAACTTCAAAAATAAAAAAGTTAATTTGAATAAATGAAAAACTTTATCTAAGATAATTAATCTGGTAAAAT
TAAATCCTATGAGTAAAGAT

Downstream 100 bases:

>100_bases
GAATTAATAAGATTTTCAATAAATTGATAATTTTTAACAACTTGTCTATAGTATTTTAATTTCAAATTTGATTTCTCAGC
TTCATCTAACAAGTAATTAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MFDLSLWIGVLLFTYITLGILYRFFGKSGLFCFNAIISTISNIIILRNVKTFGMSLNLSGITFLSALFSLNLMVEKYNKK
EATNSVILGLLLNITFTIMINFMIVFNHNKLDTSDIHFKILFNNFTYILTILIGTYVFFLSQYINILLYDYFKQIKIKSL
WIIHPLSRLISGYLANLLVSISITTILKFYPEVKNIELIEGSLIFTLMIITIDTIFYLFLNSWKKIREV

Sequences:

>Translated_229_residues
MFDLSLWIGVLLFTYITLGILYRFFGKSGLFCFNAIISTISNIIILRNVKTFGMSLNLSGITFLSALFSLNLMVEKYNKK
EATNSVILGLLLNITFTIMINFMIVFNHNKLDTSDIHFKILFNNFTYILTILIGTYVFFLSQYINILLYDYFKQIKIKSL
WIIHPLSRLISGYLANLLVSISITTILKFYPEVKNIELIEGSLIFTLMIITIDTIFYLFLNSWKKIREV
>Mature_229_residues
MFDLSLWIGVLLFTYITLGILYRFFGKSGLFCFNAIISTISNIIILRNVKTFGMSLNLSGITFLSALFSLNLMVEKYNKK
EATNSVILGLLLNITFTIMINFMIVFNHNKLDTSDIHFKILFNNFTYILTILIGTYVFFLSQYINILLYDYFKQIKIKSL
WIIHPLSRLISGYLANLLVSISITTILKFYPEVKNIELIEGSLIFTLMIITIDTIFYLFLNSWKKIREV

Specific function: Unknown

COG id: COG1738

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26591; Mature: 26591

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDLSLWIGVLLFTYITLGILYRFFGKSGLFCFNAIISTISNIIILRNVKTFGMSLNLSG
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEECHHHHCEEECCHH
ITFLSALFSLNLMVEKYNKKEATNSVILGLLLNITFTIMINFMIVFNHNKLDTSDIHFKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEEEE
LFNNFTYILTILIGTYVFFLSQYINILLYDYFKQIKIKSLWIIHPLSRLISGYLANLLVS
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISITTILKFYPEVKNIELIEGSLIFTLMIITIDTIFYLFLNSWKKIREV
HHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFDLSLWIGVLLFTYITLGILYRFFGKSGLFCFNAIISTISNIIILRNVKTFGMSLNLSG
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEECHHHHCEEECCHH
ITFLSALFSLNLMVEKYNKKEATNSVILGLLLNITFTIMINFMIVFNHNKLDTSDIHFKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEEEE
LFNNFTYILTILIGTYVFFLSQYINILLYDYFKQIKIKSLWIIHPLSRLISGYLANLLVS
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISITTILKFYPEVKNIELIEGSLIFTLMIITIDTIFYLFLNSWKKIREV
HHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA