Definition Borrelia garinii PBi chromosome chromosome linear, complete sequence.
Accession NC_006156
Length 904,246

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The map label for this gene is 51598295

Identifier: 51598295

GI number: 51598295

Start: 29400

End: 30863

Strand: Direct

Name: 51598295

Synonym: BG0032

Alternate gene names: NA

Gene position: 29400-30863 (Clockwise)

Preceding gene: 51598291

Following gene: 51598296

Centisome position: 3.25

GC content: 23.84

Gene sequence:

>1464_bases
ATGAAGGAAATTGATGAAAATTCAAATATTGATCTTTTTGAAGTTAAATTAAAGCCAATTCTAGGAATAGTTCCCAAAGT
TTACGTATTTCTTACAACAATAATATTACTTTTAAGTTTAGTATCAATTTTAATTATCATACCTAAGTTTAAAAATCCAG
GAGCATATTTAAAAATAAATTCTAACATTGAAAACACTTATATCTATTTAAACGAAAAATATATCGGCAGAACTCCACTT
AACAAATATATAAATACCACTGAAGGAATCCTTAAAGCGAAAAGGATGGGATTTAAAACCTACGAACAAAACATAAAAAT
TCACAACAAATTTTTTGGAAGCTATAATTTACAAATAAATTTAGAACTGGTTGATCCTGAAAAGATCATTGAACAAAGAC
AAAAAGAACTTTCTATAATGGTAAAAATAAAAAATACTAATGAAAATACAAAATTAATCCCTGTATTTTCATTAATATCT
AGTGAACTCAAAGAACATCCTGAATACATTAAAAAATTTCTAAAAGATTCCATACCTTACTTAAATTCAATAGAAATGTT
TAAGGATTTTTTAGATTCATATAAAGTAGTGTATTCAATAGACCAAAGCAATAGTAATCAAGAAGAAATATGGAACTCTT
TAAAAACAAATTTTGACTTAGAAAATAGGGCTAATCCTTTGTTTTTAGAAAATTTAGATAAAGATCTCAAAATACTAACA
AAAAATAAGCCTTGGATTAAAAAATTAACCAAAACTCTAGACAATGAAAACATTCAATTAATTTCTAAAAATGAAAAAAT
TAATATAAAGTTACCTAGATTTAAAAAAATAAATTCAAATAAAATCGAAAAAATTCAAAATTATAAATTAGATTCAAAAA
ATATTTCACTAAAATCTACCTATAGTATAAAAGAATTTCTTATTCAAGAACAAAATGTTACAAAATATGAGTATCAAGAT
TTTTTAAAAGAAAATCCAAAATGGACATTAAATAACAAAGAAAATTTAATAAAAGAACAACTTGTAGACGAAAATTATCT
CAAAAATTTTAATCAAATAGGCTTAAATGAAGCTATCACGGGAATATCTTATTTCTCAGCAATGGAATATGCCAACTGGT
ACTCTAAAAAACTTCCCAAAGGATTTAAAGCAAGACTCCCCATATCACAAGAATGGGAATTGTACCAAAAAGAACCAAAC
AAAAAATCATTAAATATCAATGAAATATCAAAAAAAGTTGGATTTTGGAATTTAATGCAAAATTCGTCTTTTAACGATAT
TGCAATGTTCAAAAATGAAAAAAATTTTTATAACGAAAATTCAAATTTTTATTCATTAGTAACAGAAGTTAGAACATACT
CCCATAAAAATAATAATTTAATCAATCCATCAACTAAAGCTTCTTTTTTGAAAAATTGGAGTTCTCCAAACATTGGTTTT
AGATTGATTGTATCAAAGGAATAG

Upstream 100 bases:

>100_bases
TGCAAAATTATCCAATCTTCTTAAAGACATAATCTAACCTCAAGAATTAAATCATACAAAATATTGACACTTATTTAAAT
ACTTTTCTATACTTTAAAAG

Downstream 100 bases:

>100_bases
AAGGAATAGATTTGAACACAAACACTTTACTTCTTGAAAACAAAAAGGCAAAATTTAATTACTTTATTGAAGAGAAAGTA
AGTTGTGGAATAGTATTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 487; Mature: 487

Protein sequence:

>487_residues
MKEIDENSNIDLFEVKLKPILGIVPKVYVFLTTIILLLSLVSILIIIPKFKNPGAYLKINSNIENTYIYLNEKYIGRTPL
NKYINTTEGILKAKRMGFKTYEQNIKIHNKFFGSYNLQINLELVDPEKIIEQRQKELSIMVKIKNTNENTKLIPVFSLIS
SELKEHPEYIKKFLKDSIPYLNSIEMFKDFLDSYKVVYSIDQSNSNQEEIWNSLKTNFDLENRANPLFLENLDKDLKILT
KNKPWIKKLTKTLDNENIQLISKNEKINIKLPRFKKINSNKIEKIQNYKLDSKNISLKSTYSIKEFLIQEQNVTKYEYQD
FLKENPKWTLNNKENLIKEQLVDENYLKNFNQIGLNEAITGISYFSAMEYANWYSKKLPKGFKARLPISQEWELYQKEPN
KKSLNINEISKKVGFWNLMQNSSFNDIAMFKNEKNFYNENSNFYSLVTEVRTYSHKNNNLINPSTKASFLKNWSSPNIGF
RLIVSKE

Sequences:

>Translated_487_residues
MKEIDENSNIDLFEVKLKPILGIVPKVYVFLTTIILLLSLVSILIIIPKFKNPGAYLKINSNIENTYIYLNEKYIGRTPL
NKYINTTEGILKAKRMGFKTYEQNIKIHNKFFGSYNLQINLELVDPEKIIEQRQKELSIMVKIKNTNENTKLIPVFSLIS
SELKEHPEYIKKFLKDSIPYLNSIEMFKDFLDSYKVVYSIDQSNSNQEEIWNSLKTNFDLENRANPLFLENLDKDLKILT
KNKPWIKKLTKTLDNENIQLISKNEKINIKLPRFKKINSNKIEKIQNYKLDSKNISLKSTYSIKEFLIQEQNVTKYEYQD
FLKENPKWTLNNKENLIKEQLVDENYLKNFNQIGLNEAITGISYFSAMEYANWYSKKLPKGFKARLPISQEWELYQKEPN
KKSLNINEISKKVGFWNLMQNSSFNDIAMFKNEKNFYNENSNFYSLVTEVRTYSHKNNNLINPSTKASFLKNWSSPNIGF
RLIVSKE
>Mature_487_residues
MKEIDENSNIDLFEVKLKPILGIVPKVYVFLTTIILLLSLVSILIIIPKFKNPGAYLKINSNIENTYIYLNEKYIGRTPL
NKYINTTEGILKAKRMGFKTYEQNIKIHNKFFGSYNLQINLELVDPEKIIEQRQKELSIMVKIKNTNENTKLIPVFSLIS
SELKEHPEYIKKFLKDSIPYLNSIEMFKDFLDSYKVVYSIDQSNSNQEEIWNSLKTNFDLENRANPLFLENLDKDLKILT
KNKPWIKKLTKTLDNENIQLISKNEKINIKLPRFKKINSNKIEKIQNYKLDSKNISLKSTYSIKEFLIQEQNVTKYEYQD
FLKENPKWTLNNKENLIKEQLVDENYLKNFNQIGLNEAITGISYFSAMEYANWYSKKLPKGFKARLPISQEWELYQKEPN
KKSLNINEISKKVGFWNLMQNSSFNDIAMFKNEKNFYNENSNFYSLVTEVRTYSHKNNNLINPSTKASFLKNWSSPNIGF
RLIVSKE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016187
- InterPro:   IPR013229
- InterPro:   IPR005532 [H]

Pfam domain/function: PF03781 DUF323; PF08308 PEGA [H]

EC number: NA

Molecular weight: Translated: 57430; Mature: 57430

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEIDENSNIDLFEVKLKPILGIVPKVYVFLTTIILLLSLVSILIIIPKFKNPGAYLKIN
CCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCEEEEC
SNIENTYIYLNEKYIGRTPLNKYINTTEGILKAKRMGFKTYEQNIKIHNKFFGSYNLQIN
CCCCEEEEEEECCCCCCCCHHHHHCHHHHHHHHHHCCCHHHHCCCEEEEEEEEEEEEEEE
LELVDPEKIIEQRQKELSIMVKIKNTNENTKLIPVFSLISSELKEHPEYIKKFLKDSIPY
EEEECHHHHHHHHHHCEEEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCC
LNSIEMFKDFLDSYKVVYSIDQSNSNQEEIWNSLKTNFDLENRANPLFLENLDKDLKILT
CHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCEEHHCCCCCCEEEE
KNKPWIKKLTKTLDNENIQLISKNEKINIKLPRFKKINSNKIEKIQNYKLDSKNISLKST
CCCHHHHHHHHHHCCCCEEEEECCCEEEEECCCCCCCCCHHHHHHHCCCCCCCCEEEEEH
YSIKEFLIQEQNVTKYEYQDFLKENPKWTLNNKENLIKEQLVDENYLKNFNQIGLNEAIT
HHHHHHHHHCCCCCHHHHHHHHHCCCCEEECCHHHHHHHHHCCHHHHHHHHHCCHHHHHH
GISYFSAMEYANWYSKKLPKGFKARLPISQEWELYQKEPNKKSLNINEISKKVGFWNLMQ
HHHHHHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHC
NSSFNDIAMFKNEKNFYNENSNFYSLVTEVRTYSHKNNNLINPSTKASFLKNWSSPNIGF
CCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCE
RLIVSKE
EEEEECC
>Mature Secondary Structure
MKEIDENSNIDLFEVKLKPILGIVPKVYVFLTTIILLLSLVSILIIIPKFKNPGAYLKIN
CCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCEEEEC
SNIENTYIYLNEKYIGRTPLNKYINTTEGILKAKRMGFKTYEQNIKIHNKFFGSYNLQIN
CCCCEEEEEEECCCCCCCCHHHHHCHHHHHHHHHHCCCHHHHCCCEEEEEEEEEEEEEEE
LELVDPEKIIEQRQKELSIMVKIKNTNENTKLIPVFSLISSELKEHPEYIKKFLKDSIPY
EEEECHHHHHHHHHHCEEEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCC
LNSIEMFKDFLDSYKVVYSIDQSNSNQEEIWNSLKTNFDLENRANPLFLENLDKDLKILT
CHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCEEHHCCCCCCEEEE
KNKPWIKKLTKTLDNENIQLISKNEKINIKLPRFKKINSNKIEKIQNYKLDSKNISLKST
CCCHHHHHHHHHHCCCCEEEEECCCEEEEECCCCCCCCCHHHHHHHCCCCCCCCEEEEEH
YSIKEFLIQEQNVTKYEYQDFLKENPKWTLNNKENLIKEQLVDENYLKNFNQIGLNEAIT
HHHHHHHHHCCCCCHHHHHHHHHCCCCEEECCHHHHHHHHHCCHHHHHHHHHCCHHHHHH
GISYFSAMEYANWYSKKLPKGFKARLPISQEWELYQKEPNKKSLNINEISKKVGFWNLMQ
HHHHHHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHC
NSSFNDIAMFKNEKNFYNENSNFYSLVTEVRTYSHKNNNLINPSTKASFLKNWSSPNIGF
CCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCE
RLIVSKE
EEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]