Definition Borrelia garinii PBi chromosome chromosome linear, complete sequence.
Accession NC_006156
Length 904,246

Click here to switch to the map view.

The map label for this gene is 51598291

Identifier: 51598291

GI number: 51598291

Start: 26256

End: 27305

Strand: Direct

Name: 51598291

Synonym: BG0028

Alternate gene names: NA

Gene position: 26256-27305 (Clockwise)

Preceding gene: 51598290

Following gene: 51598295

Centisome position: 2.9

GC content: 28.86

Gene sequence:

>1050_bases
ATGAAACAAAAATATGAAAACTATTTTAAAAAAAAAATAATTTTAAACCTATTAATATTTTTAATACTGACATGCTCAAG
CGAATCCATATTTTCCCAACTAGGAAATCTGCAAAAAATAAAACATGAATATAACATTTTAGGCAGTTCAAGTCCAAGAG
GAATTTCTCTAGTAGGAGAAACTCTCTATATTGCAGCCATGCATTTATTTAAAAAAGAAAACGGCAAGGTTGAAAAAATT
GACTTGAGCGATTCTTATGAGTTTATAAACGACATTGTAAATGTATCTGGAAAAACCTATCTTTTAGCCCAAAACAAAAA
AGCAGAACTAGAAGTTTGCGAACTAAATGGAAAAGATTGGGCATTAAAATTTAAAAAACCACTAAAAGCGTATAAATTCT
TAAAATCTGTGGGAAACGATGGCATAAAAGAAGCATATATTTTAGCTATAGATAAAAATAATCAAGAGAGAATTTTTAAT
CTACAAGGAGTCGACAAAACACCATCACAAGCTACTAAAAATGACAAATTTTATCAAATATCAAATGAAGGCAACTTAAT
TACAGGAAATTCACTTAAAATATGGCAAATACATAATAATACATACACAAACATAGACTACCAACAAGCCAAAGAAATAA
TGCCTATAATTAAAACAAACATTAGAGGTTTTTCTGAAATTTTAGTAATGACTGGCGGTTATAATAGTTTAGAAACAAAA
TTTAAAATGTATTCGGATGCAAATAATTACACAACGCCAATATTTATTCAAGAAGAAGTAGGTGAATTTAGCGGATACTT
TGCAAGGGAATTTAATGATGTGATATTAATCGGAAGTAATAATGGATTTGCAGAATTTACAAAAAATAAAGAAGGAATTT
TTGCTTTACAAGCACCTTCAAAGTCTGTAGAACCTGGAGCTTATAACGGTTCCCACCTAAGCAAAACGGGTCTTAATGAT
ATTATTCCTGTATCAAACAACACAATTTACATATTAACTCAGGGCAAAGGTTTGTGGAAATTGGAAAATAAAAAATTAAC
TAAAGAATAA

Upstream 100 bases:

>100_bases
TGGTGGATGATGTTTGAATTTGGAAATTCTGCAAAAATGGCACATTTTGCACTTATATCATTATCAGTTACAGTAAATGT
AAATAAATTGTAGGACAAAA

Downstream 100 bases:

>100_bases
AGAATAAAAATTTGTTATAAATTTCTCATATCTAAACTTATTAAAATCTACATCATAATATTTTTTAATCTTAATTTGAA
AATTAAGATTAATCTTAGAT

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 349; Mature: 349

Protein sequence:

>349_residues
MKQKYENYFKKKIILNLLIFLILTCSSESIFSQLGNLQKIKHEYNILGSSSPRGISLVGETLYIAAMHLFKKENGKVEKI
DLSDSYEFINDIVNVSGKTYLLAQNKKAELEVCELNGKDWALKFKKPLKAYKFLKSVGNDGIKEAYILAIDKNNQERIFN
LQGVDKTPSQATKNDKFYQISNEGNLITGNSLKIWQIHNNTYTNIDYQQAKEIMPIIKTNIRGFSEILVMTGGYNSLETK
FKMYSDANNYTTPIFIQEEVGEFSGYFAREFNDVILIGSNNGFAEFTKNKEGIFALQAPSKSVEPGAYNGSHLSKTGLND
IIPVSNNTIYILTQGKGLWKLENKKLTKE

Sequences:

>Translated_349_residues
MKQKYENYFKKKIILNLLIFLILTCSSESIFSQLGNLQKIKHEYNILGSSSPRGISLVGETLYIAAMHLFKKENGKVEKI
DLSDSYEFINDIVNVSGKTYLLAQNKKAELEVCELNGKDWALKFKKPLKAYKFLKSVGNDGIKEAYILAIDKNNQERIFN
LQGVDKTPSQATKNDKFYQISNEGNLITGNSLKIWQIHNNTYTNIDYQQAKEIMPIIKTNIRGFSEILVMTGGYNSLETK
FKMYSDANNYTTPIFIQEEVGEFSGYFAREFNDVILIGSNNGFAEFTKNKEGIFALQAPSKSVEPGAYNGSHLSKTGLND
IIPVSNNTIYILTQGKGLWKLENKKLTKE
>Mature_349_residues
MKQKYENYFKKKIILNLLIFLILTCSSESIFSQLGNLQKIKHEYNILGSSSPRGISLVGETLYIAAMHLFKKENGKVEKI
DLSDSYEFINDIVNVSGKTYLLAQNKKAELEVCELNGKDWALKFKKPLKAYKFLKSVGNDGIKEAYILAIDKNNQERIFN
LQGVDKTPSQATKNDKFYQISNEGNLITGNSLKIWQIHNNTYTNIDYQQAKEIMPIIKTNIRGFSEILVMTGGYNSLETK
FKMYSDANNYTTPIFIQEEVGEFSGYFAREFNDVILIGSNNGFAEFTKNKEGIFALQAPSKSVEPGAYNGSHLSKTGLND
IIPVSNNTIYILTQGKGLWKLENKKLTKE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39553; Mature: 39553

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQKYENYFKKKIILNLLIFLILTCSSESIFSQLGNLQKIKHEYNILGSSSPRGISLVGE
CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHCCCCCCCCCEEEHHH
TLYIAAMHLFKKENGKVEKIDLSDSYEFINDIVNVSGKTYLLAQNKKAELEVCELNGKDW
HHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCCCCEEEEECCCCCCEEEEEECCCEE
ALKFKKPLKAYKFLKSVGNDGIKEAYILAIDKNNQERIFNLQGVDKTPSQATKNDKFYQI
EEEEHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCEEEE
SNEGNLITGNSLKIWQIHNNTYTNIDYQQAKEIMPIIKTNIRGFSEILVMTGGYNSLETK
CCCCCEEECCCEEEEEEECCEECCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHE
FKMYSDANNYTTPIFIQEEVGEFSGYFAREFNDVILIGSNNGFAEFTKNKEGIFALQAPS
EEEEECCCCCCCEEEEHHHHCCHHCHHHCCCCCEEEEECCCCCEEECCCCCCEEEEECCC
KSVEPGAYNGSHLSKTGLNDIIPVSNNTIYILTQGKGLWKLENKKLTKE
CCCCCCCCCCCCCCCCCCCCEEECCCCEEEEEECCCCEEEECCCCCCCC
>Mature Secondary Structure
MKQKYENYFKKKIILNLLIFLILTCSSESIFSQLGNLQKIKHEYNILGSSSPRGISLVGE
CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHCCCCCCCCCEEEHHH
TLYIAAMHLFKKENGKVEKIDLSDSYEFINDIVNVSGKTYLLAQNKKAELEVCELNGKDW
HHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCCCCEEEEECCCCCCEEEEEECCCEE
ALKFKKPLKAYKFLKSVGNDGIKEAYILAIDKNNQERIFNLQGVDKTPSQATKNDKFYQI
EEEEHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCEEEE
SNEGNLITGNSLKIWQIHNNTYTNIDYQQAKEIMPIIKTNIRGFSEILVMTGGYNSLETK
CCCCCEEECCCEEEEEEECCEECCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHE
FKMYSDANNYTTPIFIQEEVGEFSGYFAREFNDVILIGSNNGFAEFTKNKEGIFALQAPS
EEEEECCCCCCCEEEEHHHHCCHHCHHHCCCCCEEEEECCCCCEEECCCCCCEEEEECCC
KSVEPGAYNGSHLSKTGLNDIIPVSNNTIYILTQGKGLWKLENKKLTKE
CCCCCCCCCCCCCCCCCCCCEEECCCCEEEEEECCCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]