| Definition | Borrelia garinii PBi chromosome chromosome linear, complete sequence. |
|---|---|
| Accession | NC_006156 |
| Length | 904,246 |
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The map label for this gene is 51598291
Identifier: 51598291
GI number: 51598291
Start: 26256
End: 27305
Strand: Direct
Name: 51598291
Synonym: BG0028
Alternate gene names: NA
Gene position: 26256-27305 (Clockwise)
Preceding gene: 51598290
Following gene: 51598295
Centisome position: 2.9
GC content: 28.86
Gene sequence:
>1050_bases ATGAAACAAAAATATGAAAACTATTTTAAAAAAAAAATAATTTTAAACCTATTAATATTTTTAATACTGACATGCTCAAG CGAATCCATATTTTCCCAACTAGGAAATCTGCAAAAAATAAAACATGAATATAACATTTTAGGCAGTTCAAGTCCAAGAG GAATTTCTCTAGTAGGAGAAACTCTCTATATTGCAGCCATGCATTTATTTAAAAAAGAAAACGGCAAGGTTGAAAAAATT GACTTGAGCGATTCTTATGAGTTTATAAACGACATTGTAAATGTATCTGGAAAAACCTATCTTTTAGCCCAAAACAAAAA AGCAGAACTAGAAGTTTGCGAACTAAATGGAAAAGATTGGGCATTAAAATTTAAAAAACCACTAAAAGCGTATAAATTCT TAAAATCTGTGGGAAACGATGGCATAAAAGAAGCATATATTTTAGCTATAGATAAAAATAATCAAGAGAGAATTTTTAAT CTACAAGGAGTCGACAAAACACCATCACAAGCTACTAAAAATGACAAATTTTATCAAATATCAAATGAAGGCAACTTAAT TACAGGAAATTCACTTAAAATATGGCAAATACATAATAATACATACACAAACATAGACTACCAACAAGCCAAAGAAATAA TGCCTATAATTAAAACAAACATTAGAGGTTTTTCTGAAATTTTAGTAATGACTGGCGGTTATAATAGTTTAGAAACAAAA TTTAAAATGTATTCGGATGCAAATAATTACACAACGCCAATATTTATTCAAGAAGAAGTAGGTGAATTTAGCGGATACTT TGCAAGGGAATTTAATGATGTGATATTAATCGGAAGTAATAATGGATTTGCAGAATTTACAAAAAATAAAGAAGGAATTT TTGCTTTACAAGCACCTTCAAAGTCTGTAGAACCTGGAGCTTATAACGGTTCCCACCTAAGCAAAACGGGTCTTAATGAT ATTATTCCTGTATCAAACAACACAATTTACATATTAACTCAGGGCAAAGGTTTGTGGAAATTGGAAAATAAAAAATTAAC TAAAGAATAA
Upstream 100 bases:
>100_bases TGGTGGATGATGTTTGAATTTGGAAATTCTGCAAAAATGGCACATTTTGCACTTATATCATTATCAGTTACAGTAAATGT AAATAAATTGTAGGACAAAA
Downstream 100 bases:
>100_bases AGAATAAAAATTTGTTATAAATTTCTCATATCTAAACTTATTAAAATCTACATCATAATATTTTTTAATCTTAATTTGAA AATTAAGATTAATCTTAGAT
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 349; Mature: 349
Protein sequence:
>349_residues MKQKYENYFKKKIILNLLIFLILTCSSESIFSQLGNLQKIKHEYNILGSSSPRGISLVGETLYIAAMHLFKKENGKVEKI DLSDSYEFINDIVNVSGKTYLLAQNKKAELEVCELNGKDWALKFKKPLKAYKFLKSVGNDGIKEAYILAIDKNNQERIFN LQGVDKTPSQATKNDKFYQISNEGNLITGNSLKIWQIHNNTYTNIDYQQAKEIMPIIKTNIRGFSEILVMTGGYNSLETK FKMYSDANNYTTPIFIQEEVGEFSGYFAREFNDVILIGSNNGFAEFTKNKEGIFALQAPSKSVEPGAYNGSHLSKTGLND IIPVSNNTIYILTQGKGLWKLENKKLTKE
Sequences:
>Translated_349_residues MKQKYENYFKKKIILNLLIFLILTCSSESIFSQLGNLQKIKHEYNILGSSSPRGISLVGETLYIAAMHLFKKENGKVEKI DLSDSYEFINDIVNVSGKTYLLAQNKKAELEVCELNGKDWALKFKKPLKAYKFLKSVGNDGIKEAYILAIDKNNQERIFN LQGVDKTPSQATKNDKFYQISNEGNLITGNSLKIWQIHNNTYTNIDYQQAKEIMPIIKTNIRGFSEILVMTGGYNSLETK FKMYSDANNYTTPIFIQEEVGEFSGYFAREFNDVILIGSNNGFAEFTKNKEGIFALQAPSKSVEPGAYNGSHLSKTGLND IIPVSNNTIYILTQGKGLWKLENKKLTKE >Mature_349_residues MKQKYENYFKKKIILNLLIFLILTCSSESIFSQLGNLQKIKHEYNILGSSSPRGISLVGETLYIAAMHLFKKENGKVEKI DLSDSYEFINDIVNVSGKTYLLAQNKKAELEVCELNGKDWALKFKKPLKAYKFLKSVGNDGIKEAYILAIDKNNQERIFN LQGVDKTPSQATKNDKFYQISNEGNLITGNSLKIWQIHNNTYTNIDYQQAKEIMPIIKTNIRGFSEILVMTGGYNSLETK FKMYSDANNYTTPIFIQEEVGEFSGYFAREFNDVILIGSNNGFAEFTKNKEGIFALQAPSKSVEPGAYNGSHLSKTGLND IIPVSNNTIYILTQGKGLWKLENKKLTKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39553; Mature: 39553
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQKYENYFKKKIILNLLIFLILTCSSESIFSQLGNLQKIKHEYNILGSSSPRGISLVGE CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHCCCCCCCCCEEEHHH TLYIAAMHLFKKENGKVEKIDLSDSYEFINDIVNVSGKTYLLAQNKKAELEVCELNGKDW HHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCCCCEEEEECCCCCCEEEEEECCCEE ALKFKKPLKAYKFLKSVGNDGIKEAYILAIDKNNQERIFNLQGVDKTPSQATKNDKFYQI EEEEHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCEEEE SNEGNLITGNSLKIWQIHNNTYTNIDYQQAKEIMPIIKTNIRGFSEILVMTGGYNSLETK CCCCCEEECCCEEEEEEECCEECCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHE FKMYSDANNYTTPIFIQEEVGEFSGYFAREFNDVILIGSNNGFAEFTKNKEGIFALQAPS EEEEECCCCCCCEEEEHHHHCCHHCHHHCCCCCEEEEECCCCCEEECCCCCCEEEEECCC KSVEPGAYNGSHLSKTGLNDIIPVSNNTIYILTQGKGLWKLENKKLTKE CCCCCCCCCCCCCCCCCCCCEEECCCCEEEEEECCCCEEEECCCCCCCC >Mature Secondary Structure MKQKYENYFKKKIILNLLIFLILTCSSESIFSQLGNLQKIKHEYNILGSSSPRGISLVGE CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHCCCCCCCCCEEEHHH TLYIAAMHLFKKENGKVEKIDLSDSYEFINDIVNVSGKTYLLAQNKKAELEVCELNGKDW HHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCCCCEEEEECCCCCCEEEEEECCCEE ALKFKKPLKAYKFLKSVGNDGIKEAYILAIDKNNQERIFNLQGVDKTPSQATKNDKFYQI EEEEHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCEEEE SNEGNLITGNSLKIWQIHNNTYTNIDYQQAKEIMPIIKTNIRGFSEILVMTGGYNSLETK CCCCCEEECCCEEEEEEECCEECCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHE FKMYSDANNYTTPIFIQEEVGEFSGYFAREFNDVILIGSNNGFAEFTKNKEGIFALQAPS EEEEECCCCCCCEEEEHHHHCCHHCHHHCCCCCEEEEECCCCCEEECCCCCCEEEEECCC KSVEPGAYNGSHLSKTGLNDIIPVSNNTIYILTQGKGLWKLENKKLTKE CCCCCCCCCCCCCCCCCCCCEEECCCCEEEEEECCCCEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9403685 [H]