| Definition | Borrelia garinii PBi chromosome chromosome linear, complete sequence. |
|---|---|
| Accession | NC_006156 |
| Length | 904,246 |
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The map label for this gene is 51598295
Identifier: 51598295
GI number: 51598295
Start: 29400
End: 30863
Strand: Direct
Name: 51598295
Synonym: BG0032
Alternate gene names: NA
Gene position: 29400-30863 (Clockwise)
Preceding gene: 51598291
Following gene: 51598296
Centisome position: 3.25
GC content: 23.84
Gene sequence:
>1464_bases ATGAAGGAAATTGATGAAAATTCAAATATTGATCTTTTTGAAGTTAAATTAAAGCCAATTCTAGGAATAGTTCCCAAAGT TTACGTATTTCTTACAACAATAATATTACTTTTAAGTTTAGTATCAATTTTAATTATCATACCTAAGTTTAAAAATCCAG GAGCATATTTAAAAATAAATTCTAACATTGAAAACACTTATATCTATTTAAACGAAAAATATATCGGCAGAACTCCACTT AACAAATATATAAATACCACTGAAGGAATCCTTAAAGCGAAAAGGATGGGATTTAAAACCTACGAACAAAACATAAAAAT TCACAACAAATTTTTTGGAAGCTATAATTTACAAATAAATTTAGAACTGGTTGATCCTGAAAAGATCATTGAACAAAGAC AAAAAGAACTTTCTATAATGGTAAAAATAAAAAATACTAATGAAAATACAAAATTAATCCCTGTATTTTCATTAATATCT AGTGAACTCAAAGAACATCCTGAATACATTAAAAAATTTCTAAAAGATTCCATACCTTACTTAAATTCAATAGAAATGTT TAAGGATTTTTTAGATTCATATAAAGTAGTGTATTCAATAGACCAAAGCAATAGTAATCAAGAAGAAATATGGAACTCTT TAAAAACAAATTTTGACTTAGAAAATAGGGCTAATCCTTTGTTTTTAGAAAATTTAGATAAAGATCTCAAAATACTAACA AAAAATAAGCCTTGGATTAAAAAATTAACCAAAACTCTAGACAATGAAAACATTCAATTAATTTCTAAAAATGAAAAAAT TAATATAAAGTTACCTAGATTTAAAAAAATAAATTCAAATAAAATCGAAAAAATTCAAAATTATAAATTAGATTCAAAAA ATATTTCACTAAAATCTACCTATAGTATAAAAGAATTTCTTATTCAAGAACAAAATGTTACAAAATATGAGTATCAAGAT TTTTTAAAAGAAAATCCAAAATGGACATTAAATAACAAAGAAAATTTAATAAAAGAACAACTTGTAGACGAAAATTATCT CAAAAATTTTAATCAAATAGGCTTAAATGAAGCTATCACGGGAATATCTTATTTCTCAGCAATGGAATATGCCAACTGGT ACTCTAAAAAACTTCCCAAAGGATTTAAAGCAAGACTCCCCATATCACAAGAATGGGAATTGTACCAAAAAGAACCAAAC AAAAAATCATTAAATATCAATGAAATATCAAAAAAAGTTGGATTTTGGAATTTAATGCAAAATTCGTCTTTTAACGATAT TGCAATGTTCAAAAATGAAAAAAATTTTTATAACGAAAATTCAAATTTTTATTCATTAGTAACAGAAGTTAGAACATACT CCCATAAAAATAATAATTTAATCAATCCATCAACTAAAGCTTCTTTTTTGAAAAATTGGAGTTCTCCAAACATTGGTTTT AGATTGATTGTATCAAAGGAATAG
Upstream 100 bases:
>100_bases TGCAAAATTATCCAATCTTCTTAAAGACATAATCTAACCTCAAGAATTAAATCATACAAAATATTGACACTTATTTAAAT ACTTTTCTATACTTTAAAAG
Downstream 100 bases:
>100_bases AAGGAATAGATTTGAACACAAACACTTTACTTCTTGAAAACAAAAAGGCAAAATTTAATTACTTTATTGAAGAGAAAGTA AGTTGTGGAATAGTATTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 487; Mature: 487
Protein sequence:
>487_residues MKEIDENSNIDLFEVKLKPILGIVPKVYVFLTTIILLLSLVSILIIIPKFKNPGAYLKINSNIENTYIYLNEKYIGRTPL NKYINTTEGILKAKRMGFKTYEQNIKIHNKFFGSYNLQINLELVDPEKIIEQRQKELSIMVKIKNTNENTKLIPVFSLIS SELKEHPEYIKKFLKDSIPYLNSIEMFKDFLDSYKVVYSIDQSNSNQEEIWNSLKTNFDLENRANPLFLENLDKDLKILT KNKPWIKKLTKTLDNENIQLISKNEKINIKLPRFKKINSNKIEKIQNYKLDSKNISLKSTYSIKEFLIQEQNVTKYEYQD FLKENPKWTLNNKENLIKEQLVDENYLKNFNQIGLNEAITGISYFSAMEYANWYSKKLPKGFKARLPISQEWELYQKEPN KKSLNINEISKKVGFWNLMQNSSFNDIAMFKNEKNFYNENSNFYSLVTEVRTYSHKNNNLINPSTKASFLKNWSSPNIGF RLIVSKE
Sequences:
>Translated_487_residues MKEIDENSNIDLFEVKLKPILGIVPKVYVFLTTIILLLSLVSILIIIPKFKNPGAYLKINSNIENTYIYLNEKYIGRTPL NKYINTTEGILKAKRMGFKTYEQNIKIHNKFFGSYNLQINLELVDPEKIIEQRQKELSIMVKIKNTNENTKLIPVFSLIS SELKEHPEYIKKFLKDSIPYLNSIEMFKDFLDSYKVVYSIDQSNSNQEEIWNSLKTNFDLENRANPLFLENLDKDLKILT KNKPWIKKLTKTLDNENIQLISKNEKINIKLPRFKKINSNKIEKIQNYKLDSKNISLKSTYSIKEFLIQEQNVTKYEYQD FLKENPKWTLNNKENLIKEQLVDENYLKNFNQIGLNEAITGISYFSAMEYANWYSKKLPKGFKARLPISQEWELYQKEPN KKSLNINEISKKVGFWNLMQNSSFNDIAMFKNEKNFYNENSNFYSLVTEVRTYSHKNNNLINPSTKASFLKNWSSPNIGF RLIVSKE >Mature_487_residues MKEIDENSNIDLFEVKLKPILGIVPKVYVFLTTIILLLSLVSILIIIPKFKNPGAYLKINSNIENTYIYLNEKYIGRTPL NKYINTTEGILKAKRMGFKTYEQNIKIHNKFFGSYNLQINLELVDPEKIIEQRQKELSIMVKIKNTNENTKLIPVFSLIS SELKEHPEYIKKFLKDSIPYLNSIEMFKDFLDSYKVVYSIDQSNSNQEEIWNSLKTNFDLENRANPLFLENLDKDLKILT KNKPWIKKLTKTLDNENIQLISKNEKINIKLPRFKKINSNKIEKIQNYKLDSKNISLKSTYSIKEFLIQEQNVTKYEYQD FLKENPKWTLNNKENLIKEQLVDENYLKNFNQIGLNEAITGISYFSAMEYANWYSKKLPKGFKARLPISQEWELYQKEPN KKSLNINEISKKVGFWNLMQNSSFNDIAMFKNEKNFYNENSNFYSLVTEVRTYSHKNNNLINPSTKASFLKNWSSPNIGF RLIVSKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016187 - InterPro: IPR013229 - InterPro: IPR005532 [H]
Pfam domain/function: PF03781 DUF323; PF08308 PEGA [H]
EC number: NA
Molecular weight: Translated: 57430; Mature: 57430
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEIDENSNIDLFEVKLKPILGIVPKVYVFLTTIILLLSLVSILIIIPKFKNPGAYLKIN CCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCEEEEC SNIENTYIYLNEKYIGRTPLNKYINTTEGILKAKRMGFKTYEQNIKIHNKFFGSYNLQIN CCCCEEEEEEECCCCCCCCHHHHHCHHHHHHHHHHCCCHHHHCCCEEEEEEEEEEEEEEE LELVDPEKIIEQRQKELSIMVKIKNTNENTKLIPVFSLISSELKEHPEYIKKFLKDSIPY EEEECHHHHHHHHHHCEEEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCC LNSIEMFKDFLDSYKVVYSIDQSNSNQEEIWNSLKTNFDLENRANPLFLENLDKDLKILT CHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCEEHHCCCCCCEEEE KNKPWIKKLTKTLDNENIQLISKNEKINIKLPRFKKINSNKIEKIQNYKLDSKNISLKST CCCHHHHHHHHHHCCCCEEEEECCCEEEEECCCCCCCCCHHHHHHHCCCCCCCCEEEEEH YSIKEFLIQEQNVTKYEYQDFLKENPKWTLNNKENLIKEQLVDENYLKNFNQIGLNEAIT HHHHHHHHHCCCCCHHHHHHHHHCCCCEEECCHHHHHHHHHCCHHHHHHHHHCCHHHHHH GISYFSAMEYANWYSKKLPKGFKARLPISQEWELYQKEPNKKSLNINEISKKVGFWNLMQ HHHHHHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHC NSSFNDIAMFKNEKNFYNENSNFYSLVTEVRTYSHKNNNLINPSTKASFLKNWSSPNIGF CCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCE RLIVSKE EEEEECC >Mature Secondary Structure MKEIDENSNIDLFEVKLKPILGIVPKVYVFLTTIILLLSLVSILIIIPKFKNPGAYLKIN CCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCEEEEC SNIENTYIYLNEKYIGRTPLNKYINTTEGILKAKRMGFKTYEQNIKIHNKFFGSYNLQIN CCCCEEEEEEECCCCCCCCHHHHHCHHHHHHHHHHCCCHHHHCCCEEEEEEEEEEEEEEE LELVDPEKIIEQRQKELSIMVKIKNTNENTKLIPVFSLISSELKEHPEYIKKFLKDSIPY EEEECHHHHHHHHHHCEEEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCC LNSIEMFKDFLDSYKVVYSIDQSNSNQEEIWNSLKTNFDLENRANPLFLENLDKDLKILT CHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCEEHHCCCCCCEEEE KNKPWIKKLTKTLDNENIQLISKNEKINIKLPRFKKINSNKIEKIQNYKLDSKNISLKST CCCHHHHHHHHHHCCCCEEEEECCCEEEEECCCCCCCCCHHHHHHHCCCCCCCCEEEEEH YSIKEFLIQEQNVTKYEYQDFLKENPKWTLNNKENLIKEQLVDENYLKNFNQIGLNEAIT HHHHHHHHHCCCCCHHHHHHHHHCCCCEEECCHHHHHHHHHCCHHHHHHHHHCCHHHHHH GISYFSAMEYANWYSKKLPKGFKARLPISQEWELYQKEPNKKSLNINEISKKVGFWNLMQ HHHHHHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHC NSSFNDIAMFKNEKNFYNENSNFYSLVTEVRTYSHKNNNLINPSTKASFLKNWSSPNIGF CCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCE RLIVSKE EEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9403685 [H]