| Definition | Borrelia garinii PBi chromosome chromosome linear, complete sequence. |
|---|---|
| Accession | NC_006156 |
| Length | 904,246 |
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The map label for this gene is 51598290
Identifier: 51598290
GI number: 51598290
Start: 25610
End: 26248
Strand: Direct
Name: 51598290
Synonym: BG0027
Alternate gene names: NA
Gene position: 25610-26248 (Clockwise)
Preceding gene: 51598287
Following gene: 51598291
Centisome position: 2.83
GC content: 29.89
Gene sequence:
>639_bases ATGAAAAAGTATTTTTTTATAACGCTAATTGCAGTCTTGCTAATTGGTGTAAACATAAAAAAAATTGAAGCCGCAGTCAA CATTGATAGGCATACAAACTCTACTTTGGGAATAGATTTAAGCGTTGGGGTGCCTATTTTTTACAACGACCTATCAAGAG CTTATCCTACAAATTTATATCCAGGAGGCATTGGGGCAATAAAATATCAGTACCATATTTTAAACAATTTAGCAATTGGA CTTGAACTAAGATATATGTTTAACTTTGATATTAACCATTCTTTTAATATATTAAATCCAGATTCAAGTGTAGGTAAAAT TTTTTATAGTGTGCCTATTACATTTTCAATAAACTATATATTTGACGTAGGAGAATTATTCCAAATCCCAGTTTTCACAA ATATAGGGTTTTCTCTTAATACATATGGAGATAGAAACAATAATATTACAAATTTAAGAACTTTTGATGCACTCCCTACA ATCGCTTTTGGATCTGGAATTTTATGGAACTTTAACTATAAATGGTCTTTTGGAGCAACAACATCCTGGTGGATGATGTT TGAATTTGGAAATTCTGCAAAAATGGCACATTTTGCACTTATATCATTATCAGTTACAGTAAATGTAAATAAATTGTAG
Upstream 100 bases:
>100_bases CTCAATATAAGAAAAGCTAAGCTACTAAATTTCAAATTGTAATTAAATTTATTTTCAACTATAATAAACAAGGATAGTAA TTTTAAAAGAATGGAGAATA
Downstream 100 bases:
>100_bases GACAAAAATGAAACAAAAATATGAAAACTATTTTAAAAAAAAAATAATTTTAAACCTATTAATATTTTTAATACTGACAT GCTCAAGCGAATCCATATTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 212; Mature: 212
Protein sequence:
>212_residues MKKYFFITLIAVLLIGVNIKKIEAAVNIDRHTNSTLGIDLSVGVPIFYNDLSRAYPTNLYPGGIGAIKYQYHILNNLAIG LELRYMFNFDINHSFNILNPDSSVGKIFYSVPITFSINYIFDVGELFQIPVFTNIGFSLNTYGDRNNNITNLRTFDALPT IAFGSGILWNFNYKWSFGATTSWWMMFEFGNSAKMAHFALISLSVTVNVNKL
Sequences:
>Translated_212_residues MKKYFFITLIAVLLIGVNIKKIEAAVNIDRHTNSTLGIDLSVGVPIFYNDLSRAYPTNLYPGGIGAIKYQYHILNNLAIG LELRYMFNFDINHSFNILNPDSSVGKIFYSVPITFSINYIFDVGELFQIPVFTNIGFSLNTYGDRNNNITNLRTFDALPT IAFGSGILWNFNYKWSFGATTSWWMMFEFGNSAKMAHFALISLSVTVNVNKL >Mature_212_residues MKKYFFITLIAVLLIGVNIKKIEAAVNIDRHTNSTLGIDLSVGVPIFYNDLSRAYPTNLYPGGIGAIKYQYHILNNLAIG LELRYMFNFDINHSFNILNPDSSVGKIFYSVPITFSINYIFDVGELFQIPVFTNIGFSLNTYGDRNNNITNLRTFDALPT IAFGSGILWNFNYKWSFGATTSWWMMFEFGNSAKMAHFALISLSVTVNVNKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23989; Mature: 23989
Theoretical pI: Translated: 9.12; Mature: 9.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKYFFITLIAVLLIGVNIKKIEAAVNIDRHTNSTLGIDLSVGVPIFYNDLSRAYPTNLY CCEEEHHHHHHHHHHCCCEEEEEEEEEECCCCCCEEEEEEEECCEEEECCCCHHCCCCCC PGGIGAIKYQYHILNNLAIGLELRYMFNFDINHSFNILNPDSSVGKIFYSVPITFSINYI CCCCEEEEEEEEEECCEEEEEEEEEEEEEECCCEEEEECCCCCCCEEEEEEEEEEEEEEE FDVGELFQIPVFTNIGFSLNTYGDRNNNITNLRTFDALPTIAFGSGILWNFNYKWSFGAT EECCHHEEEEEEEECCEEEECCCCCCCCCCEEEEECCCCCEEECCCEEEEEEEEEECCCC TSWWMMFEFGNSAKMAHFALISLSVTVNVNKL CEEEEEEEECCCCCEEEEEEEEEEEEEEEECC >Mature Secondary Structure MKKYFFITLIAVLLIGVNIKKIEAAVNIDRHTNSTLGIDLSVGVPIFYNDLSRAYPTNLY CCEEEHHHHHHHHHHCCCEEEEEEEEEECCCCCCEEEEEEEECCEEEECCCCHHCCCCCC PGGIGAIKYQYHILNNLAIGLELRYMFNFDINHSFNILNPDSSVGKIFYSVPITFSINYI CCCCEEEEEEEEEECCEEEEEEEEEEEEEECCCEEEEECCCCCCCEEEEEEEEEEEEEEE FDVGELFQIPVFTNIGFSLNTYGDRNNNITNLRTFDALPTIAFGSGILWNFNYKWSFGAT EECCHHEEEEEEEECCEEEECCCCCCCCCCEEEEECCCCCEEECCCEEEEEEEEEECCCC TSWWMMFEFGNSAKMAHFALISLSVTVNVNKL CEEEEEEEECCCCCEEEEEEEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9403685 [H]