Click here to switch to the map view.

The map label for this gene is yfjY

Identifier: 51598155

GI number: 51598155

Start: 4618494

End: 4618973

Strand: Reverse

Name: yfjY

Synonym: YPTB3868

Alternate gene names: 51598155

Gene position: 4618973-4618494 (Counterclockwise)

Preceding gene: 51598156

Following gene: 51598154

Centisome position: 97.35

GC content: 54.17

Gene sequence:

>480_bases
ATGAACTTAACCTTATCCCCGGTGGTCACTGAACTACCATTAAGTACGCAGCGTACTGTCAAACGTGCTCTGTTCTTGCT
GGAAGCACATCTGCGTGAACCGGGGACCTCATTCACTTCACTCGGTACCGTCAGCGATTGGCTGCGATTGCGAATGGCTA
GACTGGATCGTGAAGTGTTTATGGTGCTCTGGCTCGACAATCAACACAGGCTGTTGGCCCACGAAACGTTGTTCACCGGC
AGTATCAACAGTACCGAGGTCCACCCCCGCGAAATCGTGAAAGCGGCACTGCAACACAATGCTGCAGCGGTGCTTCTGGC
GCATTGCCATCCCTCCGGCCACGCTGAGCCCAGTGTTGCCGACCGGCAAATCACCGGCAAGATTAAAGATGCACTGGCAC
TGGTTGAGGTCAGGATGCTGGATCACTGTATTGTCGGCGGCATGACGGTGTATTCGTTTGCTGAGCACGGCTTGTTATAG

Upstream 100 bases:

>100_bases
AGATGACCTATTTCAAGCAGTTTCCTGCGCTACTGCTCAATGAGTCCTGAATACAGCGCCATCATGCATATGAACGACTG
AAAACAACGGGAAAAACTTC

Downstream 100 bases:

>100_bases
GGGGAGGCACGATGCCATCAATCACTACCCCAGCCTGGGGACTTAAACGCAACGTCACTCCGCAGTTTGGTGCCCGTCTG
GTACAGGAAGGCGACCGACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MNLTLSPVVTELPLSTQRTVKRALFLLEAHLREPGTSFTSLGTVSDWLRLRMARLDREVFMVLWLDNQHRLLAHETLFTG
SINSTEVHPREIVKAALQHNAAAVLLAHCHPSGHAEPSVADRQITGKIKDALALVEVRMLDHCIVGGMTVYSFAEHGLL

Sequences:

>Translated_159_residues
MNLTLSPVVTELPLSTQRTVKRALFLLEAHLREPGTSFTSLGTVSDWLRLRMARLDREVFMVLWLDNQHRLLAHETLFTG
SINSTEVHPREIVKAALQHNAAAVLLAHCHPSGHAEPSVADRQITGKIKDALALVEVRMLDHCIVGGMTVYSFAEHGLL
>Mature_159_residues
MNLTLSPVVTELPLSTQRTVKRALFLLEAHLREPGTSFTSLGTVSDWLRLRMARLDREVFMVLWLDNQHRLLAHETLFTG
SINSTEVHPREIVKAALQHNAAAVLLAHCHPSGHAEPSVADRQITGKIKDALALVEVRMLDHCIVGGMTVYSFAEHGLL

Specific function: Unknown

COG id: COG2003

COG function: function code L; DNA repair proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0758 family [H]

Homologues:

Organism=Escherichia coli, GI1788997, Length=159, Percent_Identity=61.6352201257862, Blast_Score=199, Evalue=8e-53,
Organism=Escherichia coli, GI2367100, Length=155, Percent_Identity=58.7096774193548, Blast_Score=183, Evalue=6e-48,
Organism=Escherichia coli, GI1788312, Length=140, Percent_Identity=61.4285714285714, Blast_Score=174, Evalue=2e-45,
Organism=Escherichia coli, GI87082300, Length=112, Percent_Identity=47.3214285714286, Blast_Score=120, Evalue=3e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001405
- InterPro:   IPR020891 [H]

Pfam domain/function: PF04002 DUF2466 [H]

EC number: NA

Molecular weight: Translated: 17677; Mature: 17677

Theoretical pI: Translated: 7.37; Mature: 7.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLTLSPVVTELPLSTQRTVKRALFLLEAHLREPGTSFTSLGTVSDWLRLRMARLDREVF
CCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCEEE
MVLWLDNQHRLLAHETLFTGSINSTEVHPREIVKAALQHNAAAVLLAHCHPSGHAEPSVA
EEEEECCCCCEEEHHHEEECCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCC
DRQITGKIKDALALVEVRMLDHCIVGGMTVYSFAEHGLL
CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCC
>Mature Secondary Structure
MNLTLSPVVTELPLSTQRTVKRALFLLEAHLREPGTSFTSLGTVSDWLRLRMARLDREVF
CCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCEEE
MVLWLDNQHRLLAHETLFTGSINSTEVHPREIVKAALQHNAAAVLLAHCHPSGHAEPSVA
EEEEECCCCCEEEHHHEEECCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCC
DRQITGKIKDALALVEVRMLDHCIVGGMTVYSFAEHGLL
CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]