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The map label for this gene is yagB

Identifier: 51598154

GI number: 51598154

Start: 4618147

End: 4618482

Strand: Reverse

Name: yagB

Synonym: YPTB3867

Alternate gene names: 51598154

Gene position: 4618482-4618147 (Counterclockwise)

Preceding gene: 51598155

Following gene: 51598153

Centisome position: 97.34

GC content: 52.68

Gene sequence:

>336_bases
ATGCCATCAATCACTACCCCAGCCTGGGGACTTAAACGCAACGTCACTCCGCAGTTTGGTGCCCGTCTGGTACAGGAAGG
CGACCGACTACATTTTCTAGCCGACCGTGCCGATATCAACGGAACCTTCAGCGAAGTGCAGGTACGTGATTTAGATAACG
CCTTCCCGCAGTTCATCAACTACCTGGAACTGATGCTGCTCTCCGGTGAGCTCAACCCTCGCCACCAGCACTGTGTCACG
TTGTATCGCAATGGCTTGACCTGTGAGGCCGATAGCCTGGGATCACACGGTTATGTGTATCTCGCTATTTATCCTACTCC
CCAATCAACTGCATAA

Upstream 100 bases:

>100_bases
CACTGGCACTGGTTGAGGTCAGGATGCTGGATCACTGTATTGTCGGCGGCATGACGGTGTATTCGTTTGCTGAGCACGGC
TTGTTATAGGGGGAGGCACG

Downstream 100 bases:

>100_bases
ATCTTCGCCTTTTATTTCTATCGATCATCTAGCTAACTACGAGATAACCCATATGCAGATCTTACCTGTTACTCCGAAAC
GGGCGGCTTATGCTTGCCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 110

Protein sequence:

>111_residues
MPSITTPAWGLKRNVTPQFGARLVQEGDRLHFLADRADINGTFSEVQVRDLDNAFPQFINYLELMLLSGELNPRHQHCVT
LYRNGLTCEADSLGSHGYVYLAIYPTPQSTA

Sequences:

>Translated_111_residues
MPSITTPAWGLKRNVTPQFGARLVQEGDRLHFLADRADINGTFSEVQVRDLDNAFPQFINYLELMLLSGELNPRHQHCVT
LYRNGLTCEADSLGSHGYVYLAIYPTPQSTA
>Mature_110_residues
PSITTPAWGLKRNVTPQFGARLVQEGDRLHFLADRADINGTFSEVQVRDLDNAFPQFINYLELMLLSGELNPRHQHCVTL
YRNGLTCEADSLGSHGYVYLAIYPTPQSTA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yafW, yeeU and yfjZ [H]

Homologues:

Organism=Escherichia coli, GI1788998, Length=103, Percent_Identity=62.1359223300971, Blast_Score=146, Evalue=3e-37,
Organism=Escherichia coli, GI1786440, Length=103, Percent_Identity=63.1067961165049, Blast_Score=144, Evalue=2e-36,
Organism=Escherichia coli, GI1788314, Length=102, Percent_Identity=67.6470588235294, Blast_Score=143, Evalue=2e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009320 [H]

Pfam domain/function: PF06154 YagB_YeeU_YfjZ [H]

EC number: NA

Molecular weight: Translated: 12452; Mature: 12321

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSITTPAWGLKRNVTPQFGARLVQEGDRLHFLADRADINGTFSEVQVRDLDNAFPQFIN
CCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCHHHEEEHHHHHHHHHHHH
YLELMLLSGELNPRHQHCVTLYRNGLTCEADSLGSHGYVYLAIYPTPQSTA
HHHHHHHCCCCCCCHHHHHHHHHCCCEECCCCCCCCCEEEEEEECCCCCCC
>Mature Secondary Structure 
PSITTPAWGLKRNVTPQFGARLVQEGDRLHFLADRADINGTFSEVQVRDLDNAFPQFIN
CCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCHHHEEEHHHHHHHHHHHH
YLELMLLSGELNPRHQHCVTLYRNGLTCEADSLGSHGYVYLAIYPTPQSTA
HHHHHHHCCCCCCCHHHHHHHHHCCCEECCCCCCCCCEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8113168; 9278503 [H]