| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is glgP
Identifier: 51598073
GI number: 51598073
Start: 4492177
End: 4494624
Strand: Reverse
Name: glgP
Synonym: YPTB3783
Alternate gene names: 51598073
Gene position: 4494624-4492177 (Counterclockwise)
Preceding gene: 51598074
Following gene: 51598071
Centisome position: 94.73
GC content: 47.22
Gene sequence:
>2448_bases ATGACATCACCGTTTAGCTATACCTCACCCGTTGTCAGTGTGGATGCACTGAAACACTCTATTGCCTATAAGCTAATGTT TATTATTGGCAAAGATCCCACCATTGCGACGCAACATGATTGGTTGAATGCAACTCTATTTGCGGTACGTGATCGCATGG TTGAACGTTGGTTACGTTCTAATCGCGCTCAATTATCACAGGACGTTCGGCAGGTTTATTATCTATCGATGGAGTTTTTA CTGGGCAGAACATTATCTAACGCGCTGTTATCAATGGGGATTTATGATGAGATCGAGCAGGCGTTGGATGAAATGGGCCT CAGTTTGTCAGAGTTGTTGAAAGAGGAGAACGATCCCGGTTTAGGTAATGGTGGTTTAGGCCGTCTGGCAGCGTGTTTCC TCGATTCATTGGCCACCCTCGCGCTACCAGGGCGGGGTTACGGCATTCGTTATGAATATGGCATGTTCAGCCAGAAAATT GTTAACGGCCAACAGATGGAGTCGCCAGATAACTGGTTGGAATATGGCAATGCATGGGAGTTTCCACGGCACAACACCCG CTATAAAGTCCGGTTCGGTGGCCGTATTCAGCAAGAAGGCAGCAAGATTCGCTGGTTAGAAACCGAAGAAATCCTCGCGT GTGCCTATGATCAAATTATTCCTGGTTTTGATACTGATGCCACCAATACATTGCGCTTATGGTCTGCGCAGGCCAGTAAT GAAATTAATCTGGGCAAATTTAATCAAGGCGATTACTTTGCCGCAGTTGAAGATAAAAACCATTCAGAGAACGTCTCTCG AGTCCTATACCCCGATGATTCCACCTATTCCGGGCGTGAATTACGCTTGCGACAAGAGTACTTTTTAGTCTCAGCGACAG TGCAGGATATTCTGAACCGCCATTGGGCGATGCATCATACATTCAATAACTTAGCCGATAAAATTGCTATTCATCTGAAT GATACACACCCGGTGCTTTCCATTCCTGAAATGATGCGTCTACTGATCGACGAGCATAAATTTACCTGGATGGACGCATG GGATGTGGTGCAACAAGTGTTTTCCTACACCAACCATACGTTGATGAGTGAGGCGCTGGAGACCTGGCCTGTCGATATGA TCGGTAAGATTTTGCCACGCCATCTGCAAATCATCTTTGATATCAATGAGCATTTCCTCAAGCTGGTGGAGGAACAATAT CCTGACGATAAAGAGCTGCTCTCAAGGGTATCGGTTATTGACGAAAACAACGGCCGACGGATACGAATGGCCTGGCTGGC GGTGATTGCCAGCCACAAAGTGAACGGCGTTTCTGCGTTACATTCTGAGCTGATGGTGCAATCGTTGTTTGCTGATTTTG CTCGTATTTTCCCTAACCGTTTCTGCAATAAAACCAACGGCGTGACACCACGGCGCTGGTTGGGGTTAGCCAACCGGCCC TTGGCGGCAGTGCTGGATGACAGTATTGGCCAGACCTGGCGTACTGACCTGAGCCAACTTAGCGAACTGGAAAAGAACCT TGATTACCCCAGTTTCTTACTGGCCTTACAAAAGGCCAAGCTGGAAAACAAAAAACGGCTGGCGGTTTACATCGCTGAAA AACTCAATATCGTGGTCAATCCGGCAGCGTTGTTTGACGTACAAATCAAACGTATTCACGAGTACAAGCGGCAATTGCTG AATGTGCTACATGTGATAACGCGTTATAACCGCATTATTGACGCGCCTGACAATAACTGGGTGCCTCGGGTGGTGATTTT TGCCGGTAAAGCCGCCTCAGCTTATTATAATGCCAAGCAAATTATTCACCTGATCAACGACGTAGCGAAGGTTATCAACA ACGATCCACGGATCAATAATTTATTGAAAGTGGTCTTTATTCCTAACTACAGTGTGAGCTTGGCGCAGTTGATCATTCCG GCGGCCGACTTGTCCGAACAGATCTCGTTGGCGGGTACAGAAGCGTCGGGGACCAGTAATATGAAGTTTGCGCTAAACGG AGCGCTAACCATTGGTACATTAGACGGTGCCAATGTGGAGATCCGCGAGCATGTCGGTGAAGAGAATATCTTTATCTTCG GGAATACGACTGAGCAGGTTGAAGCATTGCGTAAGAGTGGCTATAACCCACGGAAATATTACGACGAGGATCCTGAGTTA CATCAGGTACTGACACAGATAGCGACAGGCACGTTCAGCCCAGAAGAGCCTCATCGCTATACCAACCTGTTTGATTCGCT GGTCAATTTGGGGGATCACTACCAGCTATTGGCGGATTATCGCAGCTATGTGGACACTCAAGAGCAAGTCGATGCGCTGT ATCGCAACCGGGATGAATGGTCGCGTAAAACCTTACTGAATATTGCCAATATGGGTTATTTCTCTTCAGACCGGACGATT AAGGAGTATGCCGATGAGATTTGGCATATTAAGCCTATCCGGCTGTAG
Upstream 100 bases:
>100_bases TGGAGCTGGTAATCGTTGAAACTGGTAATTGTTAGCGCTCGTTATTGTTGGCGCTCGTCATTGTCGACTCGTTGTAGCCA TTAAACTTGGGAAAAACGTT
Downstream 100 bases:
>100_bases TGTGCGGTAATGGCATATTCAACCGCCAGTGCCACCGTAAAAAACCCTCTTCGCGGTTATCCGATGAAGAGGGTTTTTAA ATTTCTTGAGATGCTTGAAC
Product: glycogen phosphorylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 815; Mature: 814
Protein sequence:
>815_residues MTSPFSYTSPVVSVDALKHSIAYKLMFIIGKDPTIATQHDWLNATLFAVRDRMVERWLRSNRAQLSQDVRQVYYLSMEFL LGRTLSNALLSMGIYDEIEQALDEMGLSLSELLKEENDPGLGNGGLGRLAACFLDSLATLALPGRGYGIRYEYGMFSQKI VNGQQMESPDNWLEYGNAWEFPRHNTRYKVRFGGRIQQEGSKIRWLETEEILACAYDQIIPGFDTDATNTLRLWSAQASN EINLGKFNQGDYFAAVEDKNHSENVSRVLYPDDSTYSGRELRLRQEYFLVSATVQDILNRHWAMHHTFNNLADKIAIHLN DTHPVLSIPEMMRLLIDEHKFTWMDAWDVVQQVFSYTNHTLMSEALETWPVDMIGKILPRHLQIIFDINEHFLKLVEEQY PDDKELLSRVSVIDENNGRRIRMAWLAVIASHKVNGVSALHSELMVQSLFADFARIFPNRFCNKTNGVTPRRWLGLANRP LAAVLDDSIGQTWRTDLSQLSELEKNLDYPSFLLALQKAKLENKKRLAVYIAEKLNIVVNPAALFDVQIKRIHEYKRQLL NVLHVITRYNRIIDAPDNNWVPRVVIFAGKAASAYYNAKQIIHLINDVAKVINNDPRINNLLKVVFIPNYSVSLAQLIIP AADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEIREHVGEENIFIFGNTTEQVEALRKSGYNPRKYYDEDPEL HQVLTQIATGTFSPEEPHRYTNLFDSLVNLGDHYQLLADYRSYVDTQEQVDALYRNRDEWSRKTLLNIANMGYFSSDRTI KEYADEIWHIKPIRL
Sequences:
>Translated_815_residues MTSPFSYTSPVVSVDALKHSIAYKLMFIIGKDPTIATQHDWLNATLFAVRDRMVERWLRSNRAQLSQDVRQVYYLSMEFL LGRTLSNALLSMGIYDEIEQALDEMGLSLSELLKEENDPGLGNGGLGRLAACFLDSLATLALPGRGYGIRYEYGMFSQKI VNGQQMESPDNWLEYGNAWEFPRHNTRYKVRFGGRIQQEGSKIRWLETEEILACAYDQIIPGFDTDATNTLRLWSAQASN EINLGKFNQGDYFAAVEDKNHSENVSRVLYPDDSTYSGRELRLRQEYFLVSATVQDILNRHWAMHHTFNNLADKIAIHLN DTHPVLSIPEMMRLLIDEHKFTWMDAWDVVQQVFSYTNHTLMSEALETWPVDMIGKILPRHLQIIFDINEHFLKLVEEQY PDDKELLSRVSVIDENNGRRIRMAWLAVIASHKVNGVSALHSELMVQSLFADFARIFPNRFCNKTNGVTPRRWLGLANRP LAAVLDDSIGQTWRTDLSQLSELEKNLDYPSFLLALQKAKLENKKRLAVYIAEKLNIVVNPAALFDVQIKRIHEYKRQLL NVLHVITRYNRIIDAPDNNWVPRVVIFAGKAASAYYNAKQIIHLINDVAKVINNDPRINNLLKVVFIPNYSVSLAQLIIP AADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEIREHVGEENIFIFGNTTEQVEALRKSGYNPRKYYDEDPEL HQVLTQIATGTFSPEEPHRYTNLFDSLVNLGDHYQLLADYRSYVDTQEQVDALYRNRDEWSRKTLLNIANMGYFSSDRTI KEYADEIWHIKPIRL >Mature_814_residues TSPFSYTSPVVSVDALKHSIAYKLMFIIGKDPTIATQHDWLNATLFAVRDRMVERWLRSNRAQLSQDVRQVYYLSMEFLL GRTLSNALLSMGIYDEIEQALDEMGLSLSELLKEENDPGLGNGGLGRLAACFLDSLATLALPGRGYGIRYEYGMFSQKIV NGQQMESPDNWLEYGNAWEFPRHNTRYKVRFGGRIQQEGSKIRWLETEEILACAYDQIIPGFDTDATNTLRLWSAQASNE INLGKFNQGDYFAAVEDKNHSENVSRVLYPDDSTYSGRELRLRQEYFLVSATVQDILNRHWAMHHTFNNLADKIAIHLND THPVLSIPEMMRLLIDEHKFTWMDAWDVVQQVFSYTNHTLMSEALETWPVDMIGKILPRHLQIIFDINEHFLKLVEEQYP DDKELLSRVSVIDENNGRRIRMAWLAVIASHKVNGVSALHSELMVQSLFADFARIFPNRFCNKTNGVTPRRWLGLANRPL AAVLDDSIGQTWRTDLSQLSELEKNLDYPSFLLALQKAKLENKKRLAVYIAEKLNIVVNPAALFDVQIKRIHEYKRQLLN VLHVITRYNRIIDAPDNNWVPRVVIFAGKAASAYYNAKQIIHLINDVAKVINNDPRINNLLKVVFIPNYSVSLAQLIIPA ADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEIREHVGEENIFIFGNTTEQVEALRKSGYNPRKYYDEDPELH QVLTQIATGTFSPEEPHRYTNLFDSLVNLGDHYQLLADYRSYVDTQEQVDALYRNRDEWSRKTLLNIANMGYFSSDRTIK EYADEIWHIKPIRL
Specific function: Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties [
COG id: COG0058
COG function: function code G; Glucan phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycogen phosphorylase family [H]
Homologues:
Organism=Homo sapiens, GI21361370, Length=807, Percent_Identity=50.8054522924411, Blast_Score=811, Evalue=0.0, Organism=Homo sapiens, GI5032009, Length=815, Percent_Identity=49.5705521472393, Blast_Score=804, Evalue=0.0, Organism=Homo sapiens, GI71037379, Length=813, Percent_Identity=50.0615006150061, Blast_Score=801, Evalue=0.0, Organism=Homo sapiens, GI255653002, Length=813, Percent_Identity=48.7084870848708, Blast_Score=752, Evalue=0.0, Organism=Homo sapiens, GI257900462, Length=668, Percent_Identity=50.1497005988024, Blast_Score=694, Evalue=0.0, Organism=Escherichia coli, GI2367228, Length=815, Percent_Identity=79.2638036809816, Blast_Score=1350, Evalue=0.0, Organism=Escherichia coli, GI48994936, Length=768, Percent_Identity=47.0052083333333, Blast_Score=726, Evalue=0.0, Organism=Caenorhabditis elegans, GI17564550, Length=811, Percent_Identity=49.9383477188656, Blast_Score=822, Evalue=0.0, Organism=Caenorhabditis elegans, GI32566204, Length=813, Percent_Identity=49.8154981549816, Blast_Score=822, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6325418, Length=812, Percent_Identity=47.1674876847291, Blast_Score=722, Evalue=0.0, Organism=Drosophila melanogaster, GI78706832, Length=810, Percent_Identity=50.4938271604938, Blast_Score=823, Evalue=0.0, Organism=Drosophila melanogaster, GI24581010, Length=810, Percent_Identity=50.4938271604938, Blast_Score=823, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011833 - InterPro: IPR000811 [H]
Pfam domain/function: PF00343 Phosphorylase [H]
EC number: =2.4.1.1 [H]
Molecular weight: Translated: 93394; Mature: 93263
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: PS00102 PHOSPHORYLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSPFSYTSPVVSVDALKHSIAYKLMFIIGKDPTIATQHDWLNATLFAVRDRMVERWLRS CCCCCCCCCCHHHHHHHHHHHHHEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHH NRAQLSQDVRQVYYLSMEFLLGRTLSNALLSMGIYDEIEQALDEMGLSLSELLKEENDPG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHCCCCCC LGNGGLGRLAACFLDSLATLALPGRGYGIRYEYGMFSQKIVNGQQMESPDNWLEYGNAWE CCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHCCCCCCCCCHHHHHCCCCCC FPRHNTRYKVRFGGRIQQEGSKIRWLETEEILACAYDQIIPGFDTDATNTLRLWSAQASN CCCCCCEEEEEECCEECCCCCEEEEECHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCC EINLGKFNQGDYFAAVEDKNHSENVSRVLYPDDSTYSGRELRLRQEYFLVSATVQDILNR CCCCCCCCCCCEEEEECCCCCCCCCCEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHHH HWAMHHTFNNLADKIAIHLNDTHPVLSIPEMMRLLIDEHKFTWMDAWDVVQQVFSYTNHT HHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHH LMSEALETWPVDMIGKILPRHLQIIFDINEHFLKLVEEQYPDDKELLSRVSVIDENNGRR HHHHHHHHCCHHHHHHHHHHHHEEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCE IRMAWLAVIASHKVNGVSALHSELMVQSLFADFARIFPNRFCNKTNGVTPRRWLGLANRP EHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCC LAAVLDDSIGQTWRTDLSQLSELEKNLDYPSFLLALQKAKLENKKRLAVYIAEKLNIVVN HHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCEEEC PAALFDVQIKRIHEYKRQLLNVLHVITRYNRIIDAPDNNWVPRVVIFAGKAASAYYNAKQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEEEEECCHHHHHHHHHH IIHLINDVAKVINNDPRINNLLKVVFIPNYSVSLAQLIIPAADLSEQISLAGTEASGTSN HHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHCHHCHHHHHHCCCCCCCCCCC MKFALNGALTIGTLDGANVEIREHVGEENIFIFGNTTEQVEALRKSGYNPRKYYDEDPEL EEEEEECEEEEEECCCCCCHHHHHCCCCCEEEECCCHHHHHHHHHCCCCCCCCCCCCHHH HQVLTQIATGTFSPEEPHRYTNLFDSLVNLGDHYQLLADYRSYVDTQEQVDALYRNRDEW HHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHCHHHH SRKTLLNIANMGYFSSDRTIKEYADEIWHIKPIRL HHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCC >Mature Secondary Structure TSPFSYTSPVVSVDALKHSIAYKLMFIIGKDPTIATQHDWLNATLFAVRDRMVERWLRS CCCCCCCCCHHHHHHHHHHHHHEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHH NRAQLSQDVRQVYYLSMEFLLGRTLSNALLSMGIYDEIEQALDEMGLSLSELLKEENDPG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHCCCCCC LGNGGLGRLAACFLDSLATLALPGRGYGIRYEYGMFSQKIVNGQQMESPDNWLEYGNAWE CCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHCCCCCCCCCHHHHHCCCCCC FPRHNTRYKVRFGGRIQQEGSKIRWLETEEILACAYDQIIPGFDTDATNTLRLWSAQASN CCCCCCEEEEEECCEECCCCCEEEEECHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCC EINLGKFNQGDYFAAVEDKNHSENVSRVLYPDDSTYSGRELRLRQEYFLVSATVQDILNR CCCCCCCCCCCEEEEECCCCCCCCCCEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHHH HWAMHHTFNNLADKIAIHLNDTHPVLSIPEMMRLLIDEHKFTWMDAWDVVQQVFSYTNHT HHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHH LMSEALETWPVDMIGKILPRHLQIIFDINEHFLKLVEEQYPDDKELLSRVSVIDENNGRR HHHHHHHHCCHHHHHHHHHHHHEEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCE IRMAWLAVIASHKVNGVSALHSELMVQSLFADFARIFPNRFCNKTNGVTPRRWLGLANRP EHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCC LAAVLDDSIGQTWRTDLSQLSELEKNLDYPSFLLALQKAKLENKKRLAVYIAEKLNIVVN HHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCEEEC PAALFDVQIKRIHEYKRQLLNVLHVITRYNRIIDAPDNNWVPRVVIFAGKAASAYYNAKQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEEEEECCHHHHHHHHHH IIHLINDVAKVINNDPRINNLLKVVFIPNYSVSLAQLIIPAADLSEQISLAGTEASGTSN HHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHCHHCHHHHHHCCCCCCCCCCC MKFALNGALTIGTLDGANVEIREHVGEENIFIFGNTTEQVEALRKSGYNPRKYYDEDPEL EEEEEECEEEEEECCCCCCHHHHHCCCCCEEEECCCHHHHHHHHHCCCCCCCCCCCCHHH HQVLTQIATGTFSPEEPHRYTNLFDSLVNLGDHYQLLADYRSYVDTQEQVDALYRNRDEW HHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHCHHHH SRKTLLNIANMGYFSSDRTIKEYADEIWHIKPIRL HHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2645169; 3047129; 9278503; 2975249; 3097003 [H]