| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51598071
Identifier: 51598071
GI number: 51598071
Start: 4488951
End: 4489415
Strand: Reverse
Name: 51598071
Synonym: YPTB3781
Alternate gene names: NA
Gene position: 4489415-4488951 (Counterclockwise)
Preceding gene: 51598073
Following gene: 51598070
Centisome position: 94.62
GC content: 35.91
Gene sequence:
>465_bases ATGAAAGTAAAAAGTAAAAAAAATCTCTGGGCGCTATTACTGACGGGCAGCGCTTTACTGGGTTATGTTTTCTGGTTGTT ACTGCATCCGGTGGAAATTGTCTCTGTTCATCAGAGAAATGATTACAGTGATGTTTTAGTGAGGAACTTCCCTTTAACTG ATAAAAGTAAAATAAACTGGTGGCTGGAAAATAGGGATATGCTGAAGGATAAATACAGTATTCCCAAACCGGCATCTGAT GGTTTTTACACTGTTATATTTTGGGATTTTGGCGACGGCTATAAAGAAGAGGGTAAATATGACAGACGATGCTTTGATGA TATGAAAACCAGTAAGAATTGCATTGATAAAAACAAGGTTTTCTCTGTCGAGAATGACAGAAATAAAGATATATTGTTTA GCGTTTACGATGGAATGTATCGCTTAGAGAAAAATGGCAAGATAGTTAAAATGAAACGCGAATAA
Upstream 100 bases:
>100_bases TTATTCCGCATAGGGTTTGTTCTCCAACGATTCAACCAGTTTAGTTTCAAGCCATTTATGACCAATATGGAAGCCACCGT AGAGATTGCCGGGAGCCGCA
Downstream 100 bases:
>100_bases AATTGTTTTTCTCGCGTAGTGACCGTGTTTCACAGGGCACAAACCCGTTTGGCTTCAAGCTATATATTTGTCACCTTAGG CGTTATTGGTTTTTTTTATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MKVKSKKNLWALLLTGSALLGYVFWLLLHPVEIVSVHQRNDYSDVLVRNFPLTDKSKINWWLENRDMLKDKYSIPKPASD GFYTVIFWDFGDGYKEEGKYDRRCFDDMKTSKNCIDKNKVFSVENDRNKDILFSVYDGMYRLEKNGKIVKMKRE
Sequences:
>Translated_154_residues MKVKSKKNLWALLLTGSALLGYVFWLLLHPVEIVSVHQRNDYSDVLVRNFPLTDKSKINWWLENRDMLKDKYSIPKPASD GFYTVIFWDFGDGYKEEGKYDRRCFDDMKTSKNCIDKNKVFSVENDRNKDILFSVYDGMYRLEKNGKIVKMKRE >Mature_154_residues MKVKSKKNLWALLLTGSALLGYVFWLLLHPVEIVSVHQRNDYSDVLVRNFPLTDKSKINWWLENRDMLKDKYSIPKPASD GFYTVIFWDFGDGYKEEGKYDRRCFDDMKTSKNCIDKNKVFSVENDRNKDILFSVYDGMYRLEKNGKIVKMKRE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18293; Mature: 18293
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVKSKKNLWALLLTGSALLGYVFWLLLHPVEIVSVHQRNDYSDVLVRNFPLTDKSKINW CCCCCCCCEEEEEEECHHHHHHHHHHHHCHHHEEEEECCCCCCCEEEECCCCCCCCCEEE WLENRDMLKDKYSIPKPASDGFYTVIFWDFGDGYKEEGKYDRRCFDDMKTSKNCIDKNKV EECCCHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCE FSVENDRNKDILFSVYDGMYRLEKNGKIVKMKRE EEECCCCCCEEEEEECCCEEEECCCCCEEEEECC >Mature Secondary Structure MKVKSKKNLWALLLTGSALLGYVFWLLLHPVEIVSVHQRNDYSDVLVRNFPLTDKSKINW CCCCCCCCEEEEEEECHHHHHHHHHHHHCHHHEEEEECCCCCCCEEEECCCCCCCCCEEE WLENRDMLKDKYSIPKPASDGFYTVIFWDFGDGYKEEGKYDRRCFDDMKTSKNCIDKNKV EECCCHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCE FSVENDRNKDILFSVYDGMYRLEKNGKIVKMKRE EEECCCCCCEEEEEECCCEEEECCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA