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The map label for this gene is ygiQ [C]

Identifier: 51597687

GI number: 51597687

Start: 4022973

End: 4025336

Strand: Reverse

Name: ygiQ [C]

Synonym: YPTB3389

Alternate gene names: 51597687

Gene position: 4025336-4022973 (Counterclockwise)

Preceding gene: 51597688

Following gene: 51597684

Centisome position: 84.84

GC content: 51.44

Gene sequence:

>2364_bases
ATGAGTATCAGCTTGATCCAACCAGAGCGTGACCTGTTTTCTTATCAGCCTTATTGGGCTGAATGCTATGGCACCGCGCC
ATTCTTACCTATGTCACGGGAGGAAATGGACATATTGGGTTGGGACAGTTGCGATATCATTGTCATCACTGGTGATGCCT
ATGTTGACCACCCAAGCTTTGGTATGGCCATCGTTGGCCGTATGCTGGAAGCTCAGGGATTTCGGGTCGGGATTATTGCT
CAGCCAGATTGGACGAATAAACATGATTTTATGCGTCTGGGAGAGCCGAATCTGTTCTTTGGTGTCACGGCGGGCAATAT
GGATTCGATGATCAACCGCTATACGGCTGACCGAAAACTGCGCCACGATGATGCTTATACGCCGGATAACCAGAGTGGTA
AGCGGCCAGATCGCGCGACATTGGTGTATAGCCAACGCTGCAAAGAAGCCTATAGCCATGTGCCGGTATTACTGGGCGGC
ATCGAGGCCAGCCTGCGCCGTATTGCTCACTATGACTATTGGTCTGATACTGTGCGCCGCTCGGTGATCGTAGATGCTAA
AGCGGACATGCTGGTGTATGGCAATGGCGAACGGCCATTGGTGGAAGTGGCGCACCGTTTGGCTGCGGGTGAGAAAATTA
CGGATATTCAGGATGTCCGTAACACCGTTGTGATGCGTAAAACGCCCTTGCCGGGCTGGAGCGGGGTGGATTCTACCCGT
CTGGATAAACCGGGCCGTATTGAAGCCATTCCCAATCCTTACGGTGAAGATCTGCCGTGTGCGACCGATGACATATCGAT
ACCGGAGGCCAAACCAATAACCGTGCGTGCGGCCAAACCGAAGCCATGGGAAAAGACCTACGTTTTACTGCCTTCATATG
AAAAAGTGAAGGCGGACAAAGTATTGTATGCCCATACCTCGCGGATTTTGCATCATGAAACTAATCCTGGTTGTGCGCGG
GCGTTGATGCAGAAACATGGCGATCGCTATATTTGGATTAACCCACCGGCGATCCCGCTGAGTACCGAAGAGATGGACAG
TGTATTTGCACTGCCTTATCAGCGCGTCCCGCACCCGTCCTACGGAAAATCACCGATCCCGGCCTATGACATGATTCGTT
TTTCGATCAATATCATGCGCGGCTGTTATGGCGGTTGCTCCTTCTGCTCTATTACGGAGCATGAAGGGCGCATTATTCAG
AGTCGCTCTGAAGACTCTATTATTCGTGAAATCGAAGAGATTCGCGATAAAGTCCCTGGTTTTACCGGTATTATTTCTGA
TCTTGGCGGGCCTACCGCGAATATGTATATGCTGCGCTGCCAGTCCCCTCGGGCTGAACAAACCTGCCGCCGGGCGTCTT
GTGTGTATCCTGAGATTTGCCCGCACATGGATACCAACCATCAACCGACGATCTCTTTGTACCGTCGAGCCCGTGATTTG
AAAGGGATCAAAAAGATCCTGATCGCCTCCGGCGTTCGCTACGATTTGGCAGTAGAAGATCCGCGTTATATCAAAGAGTT
GGCCAGCCACCATGTGGGCGGTTATTTGAAAATCGCGCCAGAGCATACTGAGGAAGGGCCGCTTTCTAAAATGATGAAAC
CGGGTATGGGCAGCTATCAGCGCTTCAAAGAACTGTTTGATACTTACTCGAAACAGGCCGGTAAAGAGCAGTATTTGATC
CCTTATTTCATCTCCGCACATCCGGGTACTGAAGATAAAGATATGGTGAACCTGGCGCTGTGGCTGAAGAAAAACCGCTT
CCGATTGGATCAGGTGCAAAACTTCTATCCGTCACCGTTGGCTAACTCGACCACCATGTATTACACCGGTAAGAACCCGT
TGGCGAAAGTGGATTATAAAAGTGAAGAGGTGGTGGTTCCCAAAGGGGATCGTCAACGGCGATTACATAAAGCATTGCTG
CGTTATCATGATCCGGCTAACTGGCCGATGCTCCGCAGTGCGCTTGAAGATATGGGGCTGCAACATTTGATTGGCGCTCG
TCGTGAATGCCTGGTGCCGGCTCCGACCTTGGAAGAGCAGCGTGAGGCACGCCGTGCTCTGCGCCACCACACACCGGCAC
TGACCAAGCATACATCGATCACCCGCCAGCGCCAGCCGAGTAATAGAGCACCCGCAGCCTCTGCTGGCAAGAAGGCTCCG
ACGGTGGCTAATGGCACTTCTTCAGCGCACAGTACTTCTGCAAATCAAAGTACTTCTGCAAACCAAAGTACGTCTGCAAA
CCAAAGTACTTCTGCAGCCCACAGTATGCTCGCAACCAAAAAATCAGCGGGTAAAACGGGCGTAAATAAAGCTGCGGTCA
ATAAGCCATCTGCCGGATCCAGAGGGAAAAACAGACAGCATTAA

Upstream 100 bases:

>100_bases
TATCCTTCCTCTTCACATGGATAACTGCGTATAATCGCCGGCCGGTGATGATTTCTTAACCCGAACCACCTCAACTTTCC
CCCTATTAAAGAGTGTTGCC

Downstream 100 bases:

>100_bases
GGGGGTATTGCTGGCCTGAAATCAGCGGTCGGATCCGAAAACTTCCGGGTCTGGCCCCAGCCGTTTACCGCAATCCAGTT
TGGTAATTGCCAGCAACTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 787; Mature: 786

Protein sequence:

>787_residues
MSISLIQPERDLFSYQPYWAECYGTAPFLPMSREEMDILGWDSCDIIVITGDAYVDHPSFGMAIVGRMLEAQGFRVGIIA
QPDWTNKHDFMRLGEPNLFFGVTAGNMDSMINRYTADRKLRHDDAYTPDNQSGKRPDRATLVYSQRCKEAYSHVPVLLGG
IEASLRRIAHYDYWSDTVRRSVIVDAKADMLVYGNGERPLVEVAHRLAAGEKITDIQDVRNTVVMRKTPLPGWSGVDSTR
LDKPGRIEAIPNPYGEDLPCATDDISIPEAKPITVRAAKPKPWEKTYVLLPSYEKVKADKVLYAHTSRILHHETNPGCAR
ALMQKHGDRYIWINPPAIPLSTEEMDSVFALPYQRVPHPSYGKSPIPAYDMIRFSINIMRGCYGGCSFCSITEHEGRIIQ
SRSEDSIIREIEEIRDKVPGFTGIISDLGGPTANMYMLRCQSPRAEQTCRRASCVYPEICPHMDTNHQPTISLYRRARDL
KGIKKILIASGVRYDLAVEDPRYIKELASHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYQRFKELFDTYSKQAGKEQYLI
PYFISAHPGTEDKDMVNLALWLKKNRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKVDYKSEEVVVPKGDRQRRLHKALL
RYHDPANWPMLRSALEDMGLQHLIGARRECLVPAPTLEEQREARRALRHHTPALTKHTSITRQRQPSNRAPAASAGKKAP
TVANGTSSAHSTSANQSTSANQSTSANQSTSAAHSMLATKKSAGKTGVNKAAVNKPSAGSRGKNRQH

Sequences:

>Translated_787_residues
MSISLIQPERDLFSYQPYWAECYGTAPFLPMSREEMDILGWDSCDIIVITGDAYVDHPSFGMAIVGRMLEAQGFRVGIIA
QPDWTNKHDFMRLGEPNLFFGVTAGNMDSMINRYTADRKLRHDDAYTPDNQSGKRPDRATLVYSQRCKEAYSHVPVLLGG
IEASLRRIAHYDYWSDTVRRSVIVDAKADMLVYGNGERPLVEVAHRLAAGEKITDIQDVRNTVVMRKTPLPGWSGVDSTR
LDKPGRIEAIPNPYGEDLPCATDDISIPEAKPITVRAAKPKPWEKTYVLLPSYEKVKADKVLYAHTSRILHHETNPGCAR
ALMQKHGDRYIWINPPAIPLSTEEMDSVFALPYQRVPHPSYGKSPIPAYDMIRFSINIMRGCYGGCSFCSITEHEGRIIQ
SRSEDSIIREIEEIRDKVPGFTGIISDLGGPTANMYMLRCQSPRAEQTCRRASCVYPEICPHMDTNHQPTISLYRRARDL
KGIKKILIASGVRYDLAVEDPRYIKELASHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYQRFKELFDTYSKQAGKEQYLI
PYFISAHPGTEDKDMVNLALWLKKNRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKVDYKSEEVVVPKGDRQRRLHKALL
RYHDPANWPMLRSALEDMGLQHLIGARRECLVPAPTLEEQREARRALRHHTPALTKHTSITRQRQPSNRAPAASAGKKAP
TVANGTSSAHSTSANQSTSANQSTSANQSTSAAHSMLATKKSAGKTGVNKAAVNKPSAGSRGKNRQH
>Mature_786_residues
SISLIQPERDLFSYQPYWAECYGTAPFLPMSREEMDILGWDSCDIIVITGDAYVDHPSFGMAIVGRMLEAQGFRVGIIAQ
PDWTNKHDFMRLGEPNLFFGVTAGNMDSMINRYTADRKLRHDDAYTPDNQSGKRPDRATLVYSQRCKEAYSHVPVLLGGI
EASLRRIAHYDYWSDTVRRSVIVDAKADMLVYGNGERPLVEVAHRLAAGEKITDIQDVRNTVVMRKTPLPGWSGVDSTRL
DKPGRIEAIPNPYGEDLPCATDDISIPEAKPITVRAAKPKPWEKTYVLLPSYEKVKADKVLYAHTSRILHHETNPGCARA
LMQKHGDRYIWINPPAIPLSTEEMDSVFALPYQRVPHPSYGKSPIPAYDMIRFSINIMRGCYGGCSFCSITEHEGRIIQS
RSEDSIIREIEEIRDKVPGFTGIISDLGGPTANMYMLRCQSPRAEQTCRRASCVYPEICPHMDTNHQPTISLYRRARDLK
GIKKILIASGVRYDLAVEDPRYIKELASHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYQRFKELFDTYSKQAGKEQYLIP
YFISAHPGTEDKDMVNLALWLKKNRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKVDYKSEEVVVPKGDRQRRLHKALLR
YHDPANWPMLRSALEDMGLQHLIGARRECLVPAPTLEEQREARRALRHHTPALTKHTSITRQRQPSNRAPAASAGKKAPT
VANGTSSAHSTSANQSTSANQSTSANQSTSAAHSMLATKKSAGKTGVNKAAVNKPSAGSRGKNRQH

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0313 family [H]

Homologues:

Organism=Escherichia coli, GI48994917, Length=727, Percent_Identity=82.8060522696011, Blast_Score=1286, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR020612
- InterPro:   IPR007197
- InterPro:   IPR013704
- InterPro:   IPR022946 [H]

Pfam domain/function: PF04055 Radical_SAM; PF08497 Radical_SAM_N [H]

EC number: NA

Molecular weight: Translated: 88269; Mature: 88137

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: PS01278 UPF0004

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSISLIQPERDLFSYQPYWAECYGTAPFLPMSREEMDILGWDSCDIIVITGDAYVDHPSF
CCCEEECCHHHHHCCCCHHHHHCCCCCCCCCCCCCCCEECCCCCCEEEEECCCEECCCCH
GMAIVGRMLEAQGFRVGIIAQPDWTNKHDFMRLGEPNLFFGVTAGNMDSMINRYTADRKL
HHHHHHHHHHCCCCEEEEEECCCCCCCCCHHEECCCCEEEEEECCCHHHHHHHHHHHHHH
RHDDAYTPDNQSGKRPDRATLVYSQRCKEAYSHVPVLLGGIEASLRRIAHYDYWSDTVRR
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCHHHHHHHH
SVIVDAKADMLVYGNGERPLVEVAHRLAAGEKITDIQDVRNTVVMRKTPLPGWSGVDSTR
EEEEECCCCEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHEEEEECCCCCCCCCCCCC
LDKPGRIEAIPNPYGEDLPCATDDISIPEAKPITVRAAKPKPWEKTYVLLPSYEKVKADK
CCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEECCCHHHHHHHH
VLYAHTSRILHHETNPGCARALMQKHGDRYIWINPPAIPLSTEEMDSVFALPYQRVPHPS
HHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHCCHHHCCCCC
YGKSPIPAYDMIRFSINIMRGCYGGCSFCSITEHEGRIIQSRSEDSIIREIEEIRDKVPG
CCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEECCCHHHHHHHHHHHHHHCCC
FTGIISDLGGPTANMYMLRCQSPRAEQTCRRASCVYPEICPHMDTNHQPTISLYRRARDL
HHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHCCCCHHHCCCCCCCCCCHHHHHHHHHHH
KGIKKILIASGVRYDLAVEDPRYIKELASHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYQ
HHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHCCCCCHHH
RFKELFDTYSKQAGKEQYLIPYFISAHPGTEDKDMVNLALWLKKNRFRLDQVQNFYPSPL
HHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHEEEEEEHHCCCCCHHHHHHCCCCCC
ANSTTMYYTGKNPLAKVDYKSEEVVVPKGDRQRRLHKALLRYHDPANWPMLRSALEDMGL
CCCEEEEEECCCCCEEECCCCCEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCH
QHLIGARRECLVPAPTLEEQREARRALRHHTPALTKHTSITRQRQPSNRAPAASAGKKAP
HHHHCCCHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC
TVANGTSSAHSTSANQSTSANQSTSANQSTSAAHSMLATKKSAGKTGVNKAAVNKPSAGS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCC
RGKNRQH
CCCCCCC
>Mature Secondary Structure 
SISLIQPERDLFSYQPYWAECYGTAPFLPMSREEMDILGWDSCDIIVITGDAYVDHPSF
CCEEECCHHHHHCCCCHHHHHCCCCCCCCCCCCCCCEECCCCCCEEEEECCCEECCCCH
GMAIVGRMLEAQGFRVGIIAQPDWTNKHDFMRLGEPNLFFGVTAGNMDSMINRYTADRKL
HHHHHHHHHHCCCCEEEEEECCCCCCCCCHHEECCCCEEEEEECCCHHHHHHHHHHHHHH
RHDDAYTPDNQSGKRPDRATLVYSQRCKEAYSHVPVLLGGIEASLRRIAHYDYWSDTVRR
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCHHHHHHHH
SVIVDAKADMLVYGNGERPLVEVAHRLAAGEKITDIQDVRNTVVMRKTPLPGWSGVDSTR
EEEEECCCCEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHEEEEECCCCCCCCCCCCC
LDKPGRIEAIPNPYGEDLPCATDDISIPEAKPITVRAAKPKPWEKTYVLLPSYEKVKADK
CCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEECCCHHHHHHHH
VLYAHTSRILHHETNPGCARALMQKHGDRYIWINPPAIPLSTEEMDSVFALPYQRVPHPS
HHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHCCHHHCCCCC
YGKSPIPAYDMIRFSINIMRGCYGGCSFCSITEHEGRIIQSRSEDSIIREIEEIRDKVPG
CCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEECCCHHHHHHHHHHHHHHCCC
FTGIISDLGGPTANMYMLRCQSPRAEQTCRRASCVYPEICPHMDTNHQPTISLYRRARDL
HHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHCCCCHHHCCCCCCCCCCHHHHHHHHHHH
KGIKKILIASGVRYDLAVEDPRYIKELASHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYQ
HHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHCCCCCHHH
RFKELFDTYSKQAGKEQYLIPYFISAHPGTEDKDMVNLALWLKKNRFRLDQVQNFYPSPL
HHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHEEEEEEHHCCCCCHHHHHHCCCCCC
ANSTTMYYTGKNPLAKVDYKSEEVVVPKGDRQRRLHKALLRYHDPANWPMLRSALEDMGL
CCCEEEEEECCCCCEEECCCCCEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCH
QHLIGARRECLVPAPTLEEQREARRALRHHTPALTKHTSITRQRQPSNRAPAASAGKKAP
HHHHCCCHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC
TVANGTSSAHSTSANQSTSANQSTSANQSTSAAHSMLATKKSAGKTGVNKAAVNKPSAGS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCC
RGKNRQH
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]