| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51597581
Identifier: 51597581
GI number: 51597581
Start: 3866252
End: 3866743
Strand: Reverse
Name: 51597581
Synonym: YPTB3281
Alternate gene names: NA
Gene position: 3866743-3866252 (Counterclockwise)
Preceding gene: 51597582
Following gene: 51597580
Centisome position: 81.5
GC content: 27.85
Gene sequence:
>492_bases ATGCATCTTGTAAAAATAAAAAAAAGAAGGGATAGGATTATGAAATTTAAAGTTCAGTTAACACCAGAAATATTTGACTT TCCTAATTTGCATAGTGAAAGATTAGCTATTGAGAGCTACCTTGGCGATTTATTAAAGGACTTAAACTTGGAAAAAATTC TTCCTGAATGGAATATCCGATTTTTATCCTTGTTAGGCAAGGAAGGACGTGAAATTGGCGTTTATAAAAAAGGATCAATT TATTCATCTGAATTAATGAAAAGCTATACTATATATATACCAATCCCAACAAATGAAGATGTTGTATGGGGGGTTAATAA AGAAAAATATGCACATAGACCGCCAATAGATAAAAATAAAATGAAAATGTTAAATGTTAAATTTACTGATTTTAATAATT TAAGTCATTATATTGTGGAATGTTCAAAAATTGGTATTTTAGACTTATTAAAGTCGGGGATAAGCCTGAAAGGCATAAAA ATAAAAATATAA
Upstream 100 bases:
>100_bases AAGGTAGAAGCTAAGGCTGTCAAAGATTTAAGAACTAAAGGTGATGAGCTACCATTAAACAAAGAAAGGGATAAAGCTTA TAGAGCTGACTCTGATAGCA
Downstream 100 bases:
>100_bases TATTATCCTCAATAATTGAGGAGTGTTATTAATTCTGTGTCATTCCGCTAAAGTACCTAAAAGGAAGAATGGCACATAAT TAAATATTTTGATTACAACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MHLVKIKKRRDRIMKFKVQLTPEIFDFPNLHSERLAIESYLGDLLKDLNLEKILPEWNIRFLSLLGKEGREIGVYKKGSI YSSELMKSYTIYIPIPTNEDVVWGVNKEKYAHRPPIDKNKMKMLNVKFTDFNNLSHYIVECSKIGILDLLKSGISLKGIK IKI
Sequences:
>Translated_163_residues MHLVKIKKRRDRIMKFKVQLTPEIFDFPNLHSERLAIESYLGDLLKDLNLEKILPEWNIRFLSLLGKEGREIGVYKKGSI YSSELMKSYTIYIPIPTNEDVVWGVNKEKYAHRPPIDKNKMKMLNVKFTDFNNLSHYIVECSKIGILDLLKSGISLKGIK IKI >Mature_163_residues MHLVKIKKRRDRIMKFKVQLTPEIFDFPNLHSERLAIESYLGDLLKDLNLEKILPEWNIRFLSLLGKEGREIGVYKKGSI YSSELMKSYTIYIPIPTNEDVVWGVNKEKYAHRPPIDKNKMKMLNVKFTDFNNLSHYIVECSKIGILDLLKSGISLKGIK IKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19037; Mature: 19037
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHLVKIKKRRDRIMKFKVQLTPEIFDFPNLHSERLAIESYLGDLLKDLNLEKILPEWNIR CCCEEHHHHHCCEEEEEEEECCHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHCCCCCCHH FLSLLGKEGREIGVYKKGSIYSSELMKSYTIYIPIPTNEDVVWGVNKEKYAHRPPIDKNK HHHHHCCCCCEECEEECCCCCHHHHHCEEEEEEECCCCCCEEECCCCCCCCCCCCCCCCC MKMLNVKFTDFNNLSHYIVECSKIGILDLLKSGISLKGIKIKI EEEEEEEECCCCCCHHHHHHHHCCCHHHHHHCCCCCCEEEEEC >Mature Secondary Structure MHLVKIKKRRDRIMKFKVQLTPEIFDFPNLHSERLAIESYLGDLLKDLNLEKILPEWNIR CCCEEHHHHHCCEEEEEEEECCHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHCCCCCCHH FLSLLGKEGREIGVYKKGSIYSSELMKSYTIYIPIPTNEDVVWGVNKEKYAHRPPIDKNK HHHHHCCCCCEECEEECCCCCHHHHHCEEEEEEECCCCCCEEECCCCCCCCCCCCCCCCC MKMLNVKFTDFNNLSHYIVECSKIGILDLLKSGISLKGIKIKI EEEEEEEECCCCCCHHHHHHHHCCCHHHHHHCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA