| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51597580
Identifier: 51597580
GI number: 51597580
Start: 3865483
End: 3865908
Strand: Reverse
Name: 51597580
Synonym: YPTB3280
Alternate gene names: NA
Gene position: 3865908-3865483 (Counterclockwise)
Preceding gene: 51597581
Following gene: 51597579
Centisome position: 81.48
GC content: 28.4
Gene sequence:
>426_bases TTGTTCCAGATCCAAATAATAATGAGGATAGTGCCGCTTCGATATCTTCCTGTAAAAATAAAAGGAAAAAATAGCATGTT TAAAAATTACTTAGAAAACGAAGAAGTTTATCTTGAACTTGAAAATTTTTGGGTTGATTTCTTTTTAAAATTAATTAAAC AATCTGATAGATGTAATTGGATTATTCCCTATTATAAAACGGTGTTTTCTAATGGAAAAAAGTTTATGGATGCGAATCCT ATTTTTTCTGCGAAATCAAAGTCTAGCAATAAATCGATAAAAATAATACAAGAGTTGCCTGATGATTTTGACGGTGTTGA GTCATGGATTGATACTAATGGAAAAAATGAGATGGTTGTTATTTGTTCATTATCAAGGGTGAACCTTAAAAAAGTAGAGG AAATAATAGTTAGTTGGATTTATTAA
Upstream 100 bases:
>100_bases AAACAATTTTTGAATATTAATGATTTATTTATTCTTCTTTCATCAGATAGATCTTTTTGTATTGAGCAGGTTGATATAGA AGTAAACTCAGGAAAATCGT
Downstream 100 bases:
>100_bases TGAAAATATATACCTAATAAATATCAAGGTGTGGGTTTGATTACCTAAAATGATGGGAAAATAACCACATTATTTTAGAG GCTGGATGCAACGAGAGTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 141; Mature: 141
Protein sequence:
>141_residues MFQIQIIMRIVPLRYLPVKIKGKNSMFKNYLENEEVYLELENFWVDFFLKLIKQSDRCNWIIPYYKTVFSNGKKFMDANP IFSAKSKSSNKSIKIIQELPDDFDGVESWIDTNGKNEMVVICSLSRVNLKKVEEIIVSWIY
Sequences:
>Translated_141_residues MFQIQIIMRIVPLRYLPVKIKGKNSMFKNYLENEEVYLELENFWVDFFLKLIKQSDRCNWIIPYYKTVFSNGKKFMDANP IFSAKSKSSNKSIKIIQELPDDFDGVESWIDTNGKNEMVVICSLSRVNLKKVEEIIVSWIY >Mature_141_residues MFQIQIIMRIVPLRYLPVKIKGKNSMFKNYLENEEVYLELENFWVDFFLKLIKQSDRCNWIIPYYKTVFSNGKKFMDANP IFSAKSKSSNKSIKIIQELPDDFDGVESWIDTNGKNEMVVICSLSRVNLKKVEEIIVSWIY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16718; Mature: 16718
Theoretical pI: Translated: 9.03; Mature: 9.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFQIQIIMRIVPLRYLPVKIKGKNSMFKNYLENEEVYLELENFWVDFFLKLIKQSDRCNW CEEHEEEHHHHCHHEEEEEEECCHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHCCCCCCE IIPYYKTVFSNGKKFMDANPIFSAKSKSSNKSIKIIQELPDDFDGVESWIDTNGKNEMVV EHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHCCCCCCCEEE ICSLSRVNLKKVEEIIVSWIY EEECCCCCHHHHHHHHHHHCC >Mature Secondary Structure MFQIQIIMRIVPLRYLPVKIKGKNSMFKNYLENEEVYLELENFWVDFFLKLIKQSDRCNW CEEHEEEHHHHCHHEEEEEEECCHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHCCCCCCE IIPYYKTVFSNGKKFMDANPIFSAKSKSSNKSIKIIQELPDDFDGVESWIDTNGKNEMVV EHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHCCCCCCCEEE ICSLSRVNLKKVEEIIVSWIY EEECCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA