| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51597559
Identifier: 51597559
GI number: 51597559
Start: 3835622
End: 3836272
Strand: Reverse
Name: 51597559
Synonym: YPTB3257
Alternate gene names: NA
Gene position: 3836272-3835622 (Counterclockwise)
Preceding gene: 51597561
Following gene: 51597558
Centisome position: 80.85
GC content: 48.08
Gene sequence:
>651_bases ATGAATGGAAAGATTGACCGGGTTACTCATGCCCTGACTTGTGTTTCTGTTTGGATAGGATGGTTTGCACTTTCATTTTC CCTGCTGCTGTTTCCTGGCTATGTGGGAATATATCGCTCAGGTATGGCGACTCCTCTGCTGTACATCGTTTTCTGGCTCC CCTTTACGCTACTGGCGTGGAAGCATTATCAGAAGTCGTTTGGACTGATGCCGTTGGGAAGAATAACCTTGCAGGATATG CTGATTCCGGGCCTTGCTTTGCTGGGATTAACCGCTATTTTTCAGTTTTTCGGCCAGCCGGAACCCTGGGTGGAAAGCCT ATTACAGCCATCAACTTTCACTCAAATTTTGCTGGTGATAACCATTTGCGTGTTTGCTCCGATTTCGGAGGAGATTATCT TTCGTGGGTTCTTACTGAATGCGGGAATTGGTTTTGGTCGCAGAGGGCGGTTGCTGGCGGTAGTGATCACCTCGCTGTTG TTCGCTCTGGTACACACTCAATATCTCTATCCGGCGACGTTTGTTTCGCTATTCGTTTTTTCTGCGATCCTGTGTGAGGT CAGAATCAGAACTGGTAGCCTACTGATGCCGATGGTGCTTCATTCTGCGAACAATATAGCCTCCGTAGCTTGGGTGCTGA CGTTGAGTTAA
Upstream 100 bases:
>100_bases TCGCTTGGGTTAGTATCCTACTTCAGTTAAGACTTCCCTCAGTTTTATCATTTAAACCCGCTATTACCAAATGCACAGAT ATAATTAACGGAATATTACG
Downstream 100 bases:
>100_bases GGCGGTTTTTGGGCGCCCCTGTAGGTAGATGTTGGCTTTGTGCGCCAACCAACTTTGAACTTACCGGGCAATCGCCTTAC TCTGAGGCCAACGATGACCG
Product: hypothetical protein
Products: NA
Alternate protein names: Abortive Infection Protein; Microcin M Activity Protein McmM
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MNGKIDRVTHALTCVSVWIGWFALSFSLLLFPGYVGIYRSGMATPLLYIVFWLPFTLLAWKHYQKSFGLMPLGRITLQDM LIPGLALLGLTAIFQFFGQPEPWVESLLQPSTFTQILLVITICVFAPISEEIIFRGFLLNAGIGFGRRGRLLAVVITSLL FALVHTQYLYPATFVSLFVFSAILCEVRIRTGSLLMPMVLHSANNIASVAWVLTLS
Sequences:
>Translated_216_residues MNGKIDRVTHALTCVSVWIGWFALSFSLLLFPGYVGIYRSGMATPLLYIVFWLPFTLLAWKHYQKSFGLMPLGRITLQDM LIPGLALLGLTAIFQFFGQPEPWVESLLQPSTFTQILLVITICVFAPISEEIIFRGFLLNAGIGFGRRGRLLAVVITSLL FALVHTQYLYPATFVSLFVFSAILCEVRIRTGSLLMPMVLHSANNIASVAWVLTLS >Mature_216_residues MNGKIDRVTHALTCVSVWIGWFALSFSLLLFPGYVGIYRSGMATPLLYIVFWLPFTLLAWKHYQKSFGLMPLGRITLQDM LIPGLALLGLTAIFQFFGQPEPWVESLLQPSTFTQILLVITICVFAPISEEIIFRGFLLNAGIGFGRRGRLLAVVITSLL FALVHTQYLYPATFVSLFVFSAILCEVRIRTGSLLMPMVLHSANNIASVAWVLTLS
Specific function: Unknown
COG id: COG1266
COG function: function code R; Predicted metal-dependent membrane protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24106; Mature: 24106
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGKIDRVTHALTCVSVWIGWFALSFSLLLFPGYVGIYRSGMATPLLYIVFWLPFTLLAW CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH KHYQKSFGLMPLGRITLQDMLIPGLALLGLTAIFQFFGQPEPWVESLLQPSTFTQILLVI HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHH TICVFAPISEEIIFRGFLLNAGIGFGRRGRLLAVVITSLLFALVHTQYLYPATFVSLFVF HHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAILCEVRIRTGSLLMPMVLHSANNIASVAWVLTLS HHHHHHHHHCCCCHHHHHHHHCCCCHHHHHEEEECC >Mature Secondary Structure MNGKIDRVTHALTCVSVWIGWFALSFSLLLFPGYVGIYRSGMATPLLYIVFWLPFTLLAW CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH KHYQKSFGLMPLGRITLQDMLIPGLALLGLTAIFQFFGQPEPWVESLLQPSTFTQILLVI HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHH TICVFAPISEEIIFRGFLLNAGIGFGRRGRLLAVVITSLLFALVHTQYLYPATFVSLFVF HHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAILCEVRIRTGSLLMPMVLHSANNIASVAWVLTLS HHHHHHHHHCCCCHHHHHHHHCCCCHHHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA