| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51597558
Identifier: 51597558
GI number: 51597558
Start: 3834776
End: 3835171
Strand: Reverse
Name: 51597558
Synonym: YPTB3256
Alternate gene names: NA
Gene position: 3835171-3834776 (Counterclockwise)
Preceding gene: 51597559
Following gene: 51597557
Centisome position: 80.83
GC content: 37.88
Gene sequence:
>396_bases ATGATGAATAAATTTTTTAAAATAATATCGATAAATTTATTGGCAATTTCTCTTGGTGGTTGTGGGATGATGCTTAATCC TCTGCTTATGAAGCAGGCTGAAGTTGAACCCAACAACTTACCTGATGGTAAGTTAGGACAACCCTATTATGCTAAACTTA GAATAACGGGGGGAGGCGGTGCTATTGCTTCTTTTAAGGGAGAATCGATGCCAGTTGGATCAGGGTTGGTATTAACATCG GATAATCCAGAGCGACCACCGGGTAGAGATGAACTGGTTATAAAAGGCATTCCTGTGATATCTGGTGATATTACGTTTAG AGTCAGCGGTGCCTTGTTTAGTAGTGCAGATAATGTATATTTTGGTAAAGAATATAAATTAAAAATAGCCGAATAA
Upstream 100 bases:
>100_bases TATAACTGTATTTATATCTACACCTTTAATCTATAAGCGTTAGATGGTTTTTTAGAGTGTTAATTTTTTGGAGGCGGCAT GTTAAAAAATGTCATAAATT
Downstream 100 bases:
>100_bases TATTAATTTCGGTAATGACTCCAATTGGTTGAATTTGATGTACAATGCGATTTTTTGAGGTTTGCTCATGGCTTGCATTA ATGTTCATTGTCCCCGTTGT
Product: lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 131; Mature: 131
Protein sequence:
>131_residues MMNKFFKIISINLLAISLGGCGMMLNPLLMKQAEVEPNNLPDGKLGQPYYAKLRITGGGGAIASFKGESMPVGSGLVLTS DNPERPPGRDELVIKGIPVISGDITFRVSGALFSSADNVYFGKEYKLKIAE
Sequences:
>Translated_131_residues MMNKFFKIISINLLAISLGGCGMMLNPLLMKQAEVEPNNLPDGKLGQPYYAKLRITGGGGAIASFKGESMPVGSGLVLTS DNPERPPGRDELVIKGIPVISGDITFRVSGALFSSADNVYFGKEYKLKIAE >Mature_131_residues MMNKFFKIISINLLAISLGGCGMMLNPLLMKQAEVEPNNLPDGKLGQPYYAKLRITGGGGAIASFKGESMPVGSGLVLTS DNPERPPGRDELVIKGIPVISGDITFRVSGALFSSADNVYFGKEYKLKIAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13995; Mature: 13995
Theoretical pI: Translated: 9.04; Mature: 9.04
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMNKFFKIISINLLAISLGGCGMMLNPLLMKQAEVEPNNLPDGKLGQPYYAKLRITGGGG CCCHHEEEEEEEEEEEEECCCCHHHCHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCC AIASFKGESMPVGSGLVLTSDNPERPPGRDELVIKGIPVISGDITFRVSGALFSSADNVY EEEEECCCCCCCCCCEEEECCCCCCCCCCCCEEEECCCEEECCEEEEECCEEECCCCCEE FGKEYKLKIAE ECCEEEEEECC >Mature Secondary Structure MMNKFFKIISINLLAISLGGCGMMLNPLLMKQAEVEPNNLPDGKLGQPYYAKLRITGGGG CCCHHEEEEEEEEEEEEECCCCHHHCHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCC AIASFKGESMPVGSGLVLTSDNPERPPGRDELVIKGIPVISGDITFRVSGALFSSADNVY EEEEECCCCCCCCCCEEEECCCCCCCCCCCCEEEECCCEEECCEEEEECCEEECCCCCEE FGKEYKLKIAE ECCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA