Click here to switch to the map view.

The map label for this gene is glnD

Identifier: 51597320

GI number: 51597320

Start: 3544063

End: 3546744

Strand: Direct

Name: glnD

Synonym: YPTB3005

Alternate gene names: 51597320

Gene position: 3544063-3546744 (Clockwise)

Preceding gene: 51597319

Following gene: 51597321

Centisome position: 74.7

GC content: 48.96

Gene sequence:

>2682_bases
ATGTCTGACAATCACACCGAACACTCCCTATCGCTGACGCTCACTCCCACTATTTCTGAGCAGCCCGTACTTCCCAGCAC
TTATCTTGATAGCGACATCAATTGCCCGATACTGAAGCAACGGCTTGACGCTTTCCAACGCTGGCAGGCAGAGGCATTTA
ATAGTGGCACCTCTGCCGAGGTATTAATTGCGGCACGCAGTGATTATATCGATCATCTGTTACAGCGGTTGTGGACATTC
TATGGTTTTGACAATGTGCCAGAAACAGCTCTGGTTGCGGTCGGTGGCTATGGGCGCGGCGAACTGCATCCATTATCAGA
TATTGATGTGTTAGTACTGAGTAAGCAGCGTCTAAATGATGAACATGCGCAACGGGTTGGCCAACTCATTACCTTATTGT
GGGATTTGAAGCTGGAAGTCGGTCATAGTGTGCGCACACTGGAAGAGTGCTTGCTGGAAGGCCTCGCAGATTTAACCATA
GCCACCAATATGATTGAGTCACGGCTGATTTGCGGTGATGTCGCCCTTTTTTTACAGATGCAAAAACATATTTTCAGTGA
CAGTTTCTGGCCCTCCCCTCAATTTTTCCATGCAAAAGTTGTTGAACAGCAAGAGCGTCATAAACGCTATCACGGCACCA
GCTATAATCTGGAACCCGATATCAAAAGTAGCCCTGGTGGATTACGGGATATCCACACATTACTCTGGGTTGCCCGTCGC
CATTTTGGTGCCACATCATTAAGTGAAATGGTTGATTTTGGGTTTCTCACTAACGCCGAGCGTAATGAACTGAATGAAAG
CCAGAGTTTTTTATGGCGTATCCGTTTTGCGCTGCACCTGGTATTGACTCGCTACGATAACCGCCTGCTGTTTGATCGCC
AACTGAGCGTTGCTCAACTTTTACGCTACGAAGGTGAAGGCAATGAGCCCGTTGAACATATGATGAAAGATTTCTATCGT
ATGACACGGCGTGTCAGTGAACTGAACAATATGCTGCTGCAATTGTTTGATGAAGCCATACTGGCGTTAGAGGCGAATGA
AAAACCGCGTCCACTTGACGAAGAGTTTCAACTACGGGGAGATTTAATTGATCTCCGTGATGAGAACCTATTTGTTCGTC
AGCCTGAAGCGATCATGCGGATGTTCTATCTGATGGTGCGCAATCAGGATATTAAAGGTATTTACTCCACTACCGTCCGG
CGTTTGCGCCATGCCCGTCGCCATCTGAAAGCCCCTTTATGTCACATTCCTGAAGCTCGTAAGCTGTTTATGGCCATTTT
GCGCCACCCCGGTGCCGTTTCACGTGCGTTACTGCCCATGCATCGTCACAGTGTTTTATGGGCCTATATGCCGCAATGGG
GCAGTATTGTTGGCCAAATGCAATTTGATCTATTTCATGCTTATACGGTGGATGAACACACCATCCGTGTTTTGCTAAAA
ATTGAAAGCTTCGCGGATGAAGATACCCGGCCACGTCATCCACTCTGCGTCGAACTCTACCCTCGCCTGCCTCAGCCTGA
ATTACTGCTGCTGGCCGCCCTGTTTCATGATATTGCCAAAGGGCGTGGCGGTGATCATTCAATACTGGGTGCCCACGACG
CGGTGGAGTTTGCTGAACAGCATGGGCTTAATTCACGCGAATCCCAATTAGTCGCTTGGTTAGTTCGCTGCCATTTATTG
ATGTCAGTGACCGCCCAACGTAGGGATATTCAGGACCCGGCCGTTATTCAGCAATTTTCTGCCGAAGTGCAAAGTGAAAC
GCGCCTGCGCTATCTGGTCAGCCTGACCGTGGCAGATATTTGCGCCACCAATGAAAATCTATGGAATAGCTGGAAACAGA
GCCTGTTACGCGAACTGTACTTTGCGACCGAAAAACAGCTACGCCGCGGAATGCAAAATAGCCCTGATTTACGTGAGCGT
GTACGCCACCACCGCCTGCAAGCGTTAGCTCTACTGCGGATGGATAATATTGATGAAGAGGCACTGCATCGTATCTGGAG
CCGTTGCCGAGCGGATTACTTCCTACGCCACTCGCCGAATCAACTTGCCTGGCACGCCCGCCATTTGCTGGAGCACGACT
CAACCAAACCGCTAGTCTTAGTCAGCCGTCAGGCTACCCGTGGTGGGACTGAAATATTTATCTGGAGCCCTGACCGCCCA
TCACTCTTTGCCGCTGTTGTTGGGGAGCTTGATCGCCGCAACTTGAGCGTCCATGACGCACAAATTTTCACCAATCGTGA
TGGTATGGCGATGGATACCTTTATTGTATTGGAGCCAGATGGCAGCCCGTTGGCACAGGATAGGCATCCAATAATCAGCC
ATGCATTACAGCAAGCGATAAACCGGTCAGATTACCAACACCCGCCGCGGGTTAGGCGATTATCACCTAAATTACGGCAT
TTCAGCGTGCCAACCGAAGCTAACTTTTTACCAACCCATAACGAGCGGCGTACTTATCTGGAATTAATTGCGTTAGATCA
ACCAGGGTTACTGGCACGTGTTGGCAAAATTTTTGCTGATTTAGGGTTATCACTGCACAGTGCACGTATCACCACCATCG
GCGAGCGAGTAGAGGATTTATTTGTTTTAGCAGATAAAGATCGTCGAGCACTGAGCCTTGAAACCCGTCGTGAATTAGCA
CAACGATTGGCAGATACTCTCAATCCAAACGATAAACTGTGA

Upstream 100 bases:

>100_bases
GTAAGGATGACACTATCCCCAACATCATAACGCACGAGTAATAATGACAAGCCGGCACCGCCGGCTTTTTTATGGGCTGC
GTTCCTCATCGGGTAAACAT

Downstream 100 bases:

>100_bases
TACAAATATCTTTTTAGTAATTAATATTTATTAAAATTAATTTTTTACTATTCGTTTTTATCACGACTCATTTTATTACA
ACCTATACCCCAGCGATTAG

Product: PII uridylyl-transferase

Products: NA

Alternate protein names: PII uridylyl-transferase; UTase; Uridylyl-removing enzyme [H]

Number of amino acids: Translated: 893; Mature: 892

Protein sequence:

>893_residues
MSDNHTEHSLSLTLTPTISEQPVLPSTYLDSDINCPILKQRLDAFQRWQAEAFNSGTSAEVLIAARSDYIDHLLQRLWTF
YGFDNVPETALVAVGGYGRGELHPLSDIDVLVLSKQRLNDEHAQRVGQLITLLWDLKLEVGHSVRTLEECLLEGLADLTI
ATNMIESRLICGDVALFLQMQKHIFSDSFWPSPQFFHAKVVEQQERHKRYHGTSYNLEPDIKSSPGGLRDIHTLLWVARR
HFGATSLSEMVDFGFLTNAERNELNESQSFLWRIRFALHLVLTRYDNRLLFDRQLSVAQLLRYEGEGNEPVEHMMKDFYR
MTRRVSELNNMLLQLFDEAILALEANEKPRPLDEEFQLRGDLIDLRDENLFVRQPEAIMRMFYLMVRNQDIKGIYSTTVR
RLRHARRHLKAPLCHIPEARKLFMAILRHPGAVSRALLPMHRHSVLWAYMPQWGSIVGQMQFDLFHAYTVDEHTIRVLLK
IESFADEDTRPRHPLCVELYPRLPQPELLLLAALFHDIAKGRGGDHSILGAHDAVEFAEQHGLNSRESQLVAWLVRCHLL
MSVTAQRRDIQDPAVIQQFSAEVQSETRLRYLVSLTVADICATNENLWNSWKQSLLRELYFATEKQLRRGMQNSPDLRER
VRHHRLQALALLRMDNIDEEALHRIWSRCRADYFLRHSPNQLAWHARHLLEHDSTKPLVLVSRQATRGGTEIFIWSPDRP
SLFAAVVGELDRRNLSVHDAQIFTNRDGMAMDTFIVLEPDGSPLAQDRHPIISHALQQAINRSDYQHPPRVRRLSPKLRH
FSVPTEANFLPTHNERRTYLELIALDQPGLLARVGKIFADLGLSLHSARITTIGERVEDLFVLADKDRRALSLETRRELA
QRLADTLNPNDKL

Sequences:

>Translated_893_residues
MSDNHTEHSLSLTLTPTISEQPVLPSTYLDSDINCPILKQRLDAFQRWQAEAFNSGTSAEVLIAARSDYIDHLLQRLWTF
YGFDNVPETALVAVGGYGRGELHPLSDIDVLVLSKQRLNDEHAQRVGQLITLLWDLKLEVGHSVRTLEECLLEGLADLTI
ATNMIESRLICGDVALFLQMQKHIFSDSFWPSPQFFHAKVVEQQERHKRYHGTSYNLEPDIKSSPGGLRDIHTLLWVARR
HFGATSLSEMVDFGFLTNAERNELNESQSFLWRIRFALHLVLTRYDNRLLFDRQLSVAQLLRYEGEGNEPVEHMMKDFYR
MTRRVSELNNMLLQLFDEAILALEANEKPRPLDEEFQLRGDLIDLRDENLFVRQPEAIMRMFYLMVRNQDIKGIYSTTVR
RLRHARRHLKAPLCHIPEARKLFMAILRHPGAVSRALLPMHRHSVLWAYMPQWGSIVGQMQFDLFHAYTVDEHTIRVLLK
IESFADEDTRPRHPLCVELYPRLPQPELLLLAALFHDIAKGRGGDHSILGAHDAVEFAEQHGLNSRESQLVAWLVRCHLL
MSVTAQRRDIQDPAVIQQFSAEVQSETRLRYLVSLTVADICATNENLWNSWKQSLLRELYFATEKQLRRGMQNSPDLRER
VRHHRLQALALLRMDNIDEEALHRIWSRCRADYFLRHSPNQLAWHARHLLEHDSTKPLVLVSRQATRGGTEIFIWSPDRP
SLFAAVVGELDRRNLSVHDAQIFTNRDGMAMDTFIVLEPDGSPLAQDRHPIISHALQQAINRSDYQHPPRVRRLSPKLRH
FSVPTEANFLPTHNERRTYLELIALDQPGLLARVGKIFADLGLSLHSARITTIGERVEDLFVLADKDRRALSLETRRELA
QRLADTLNPNDKL
>Mature_892_residues
SDNHTEHSLSLTLTPTISEQPVLPSTYLDSDINCPILKQRLDAFQRWQAEAFNSGTSAEVLIAARSDYIDHLLQRLWTFY
GFDNVPETALVAVGGYGRGELHPLSDIDVLVLSKQRLNDEHAQRVGQLITLLWDLKLEVGHSVRTLEECLLEGLADLTIA
TNMIESRLICGDVALFLQMQKHIFSDSFWPSPQFFHAKVVEQQERHKRYHGTSYNLEPDIKSSPGGLRDIHTLLWVARRH
FGATSLSEMVDFGFLTNAERNELNESQSFLWRIRFALHLVLTRYDNRLLFDRQLSVAQLLRYEGEGNEPVEHMMKDFYRM
TRRVSELNNMLLQLFDEAILALEANEKPRPLDEEFQLRGDLIDLRDENLFVRQPEAIMRMFYLMVRNQDIKGIYSTTVRR
LRHARRHLKAPLCHIPEARKLFMAILRHPGAVSRALLPMHRHSVLWAYMPQWGSIVGQMQFDLFHAYTVDEHTIRVLLKI
ESFADEDTRPRHPLCVELYPRLPQPELLLLAALFHDIAKGRGGDHSILGAHDAVEFAEQHGLNSRESQLVAWLVRCHLLM
SVTAQRRDIQDPAVIQQFSAEVQSETRLRYLVSLTVADICATNENLWNSWKQSLLRELYFATEKQLRRGMQNSPDLRERV
RHHRLQALALLRMDNIDEEALHRIWSRCRADYFLRHSPNQLAWHARHLLEHDSTKPLVLVSRQATRGGTEIFIWSPDRPS
LFAAVVGELDRRNLSVHDAQIFTNRDGMAMDTFIVLEPDGSPLAQDRHPIISHALQQAINRSDYQHPPRVRRLSPKLRHF
SVPTEANFLPTHNERRTYLELIALDQPGLLARVGKIFADLGLSLHSARITTIGERVEDLFVLADKDRRALSLETRRELAQ
RLADTLNPNDKL

Specific function: Modifies, by uridylylation or deuridylylation the PII (glnB) regulatory protein [H]

COG id: COG2844

COG function: function code O; UTP:GlnB (protein PII) uridylyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glnD family [H]

Homologues:

Organism=Escherichia coli, GI1786363, Length=880, Percent_Identity=76.3636363636364, Blast_Score=1401, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002912
- InterPro:   IPR010043
- InterPro:   IPR003607
- InterPro:   IPR002934
- InterPro:   IPR013546 [H]

Pfam domain/function: PF01842 ACT; PF08335 GlnD_UR_UTase; PF01909 NTP_transf_2 [H]

EC number: =2.7.7.59 [H]

Molecular weight: Translated: 103173; Mature: 103042

Theoretical pI: Translated: 7.05; Mature: 7.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDNHTEHSLSLTLTPTISEQPVLPSTYLDSDINCPILKQRLDAFQRWQAEAFNSGTSAE
CCCCCCCCEEEEEEECCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCE
VLIAARSDYIDHLLQRLWTFYGFDNVPETALVAVGGYGRGELHPLSDIDVLVLSKQRLND
EEEEEHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEECHHHCCH
EHAQRVGQLITLLWDLKLEVGHSVRTLEECLLEGLADLTIATNMIESRLICGDVALFLQM
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QKHIFSDSFWPSPQFFHAKVVEQQERHKRYHGTSYNLEPDIKSSPGGLRDIHTLLWVARR
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
HFGATSLSEMVDFGFLTNAERNELNESQSFLWRIRFALHLVLTRYDNRLLFDRQLSVAQL
HCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHH
LRYEGEGNEPVEHMMKDFYRMTRRVSELNNMLLQLFDEAILALEANEKPRPLDEEFQLRG
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHCC
DLIDLRDENLFVRQPEAIMRMFYLMVRNQDIKGIYSTTVRRLRHARRHLKAPLCHIPEAR
CEEEECCCCEEEECCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHH
KLFMAILRHPGAVSRALLPMHRHSVLWAYMPQWGSIVGQMQFDLFHAYTVDEHTIRVLLK
HHHHHHHHCCCHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHEEEECCCHHEEEEEE
IESFADEDTRPRHPLCVELYPRLPQPELLLLAALFHDIAKGRGGDHSILGAHDAVEFAEQ
EHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCEECCHHHHHHHHH
HGLNSRESQLVAWLVRCHLLMSVTAQRRDIQDPAVIQQFSAEVQSETRLRYLVSLTVADI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CATNENLWNSWKQSLLRELYFATEKQLRRGMQNSPDLRERVRHHRLQALALLRMDNIDEE
HHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHH
ALHRIWSRCRADYFLRHSPNQLAWHARHLLEHDSTKPLVLVSRQATRGGTEIFIWSPDRP
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEEECCCCC
SLFAAVVGELDRRNLSVHDAQIFTNRDGMAMDTFIVLEPDGSPLAQDRHPIISHALQQAI
HHHHHHHHHHHHCCCCEEHHEEEECCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHH
NRSDYQHPPRVRRLSPKLRHFSVPTEANFLPTHNERRTYLELIALDQPGLLARVGKIFAD
CCCCCCCCCHHHHCCCHHHHCCCCCCCCCCCCCCCCHHEEEEEECCCCCHHHHHHHHHHH
LGLSLHSARITTIGERVEDLFVLADKDRRALSLETRRELAQRLADTLNPNDKL
HCCHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SDNHTEHSLSLTLTPTISEQPVLPSTYLDSDINCPILKQRLDAFQRWQAEAFNSGTSAE
CCCCCCCEEEEEEECCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCE
VLIAARSDYIDHLLQRLWTFYGFDNVPETALVAVGGYGRGELHPLSDIDVLVLSKQRLND
EEEEEHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEECHHHCCH
EHAQRVGQLITLLWDLKLEVGHSVRTLEECLLEGLADLTIATNMIESRLICGDVALFLQM
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QKHIFSDSFWPSPQFFHAKVVEQQERHKRYHGTSYNLEPDIKSSPGGLRDIHTLLWVARR
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
HFGATSLSEMVDFGFLTNAERNELNESQSFLWRIRFALHLVLTRYDNRLLFDRQLSVAQL
HCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHH
LRYEGEGNEPVEHMMKDFYRMTRRVSELNNMLLQLFDEAILALEANEKPRPLDEEFQLRG
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHCC
DLIDLRDENLFVRQPEAIMRMFYLMVRNQDIKGIYSTTVRRLRHARRHLKAPLCHIPEAR
CEEEECCCCEEEECCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHH
KLFMAILRHPGAVSRALLPMHRHSVLWAYMPQWGSIVGQMQFDLFHAYTVDEHTIRVLLK
HHHHHHHHCCCHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHEEEECCCHHEEEEEE
IESFADEDTRPRHPLCVELYPRLPQPELLLLAALFHDIAKGRGGDHSILGAHDAVEFAEQ
EHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCEECCHHHHHHHHH
HGLNSRESQLVAWLVRCHLLMSVTAQRRDIQDPAVIQQFSAEVQSETRLRYLVSLTVADI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CATNENLWNSWKQSLLRELYFATEKQLRRGMQNSPDLRERVRHHRLQALALLRMDNIDEE
HHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHH
ALHRIWSRCRADYFLRHSPNQLAWHARHLLEHDSTKPLVLVSRQATRGGTEIFIWSPDRP
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEEECCCCC
SLFAAVVGELDRRNLSVHDAQIFTNRDGMAMDTFIVLEPDGSPLAQDRHPIISHALQQAI
HHHHHHHHHHHHCCCCEEHHEEEECCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHH
NRSDYQHPPRVRRLSPKLRHFSVPTEANFLPTHNERRTYLELIALDQPGLLARVGKIFAD
CCCCCCCCCHHHHCCCHHHHCCCCCCCCCCCCCCCCHHEEEEEECCCCCHHHHHHHHHHH
LGLSLHSARITTIGERVEDLFVLADKDRRALSLETRRELAQRLADTLNPNDKL
HCCHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA