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The map label for this gene is ampM

Identifier: 51597319

GI number: 51597319

Start: 3543212

End: 3544003

Strand: Direct

Name: ampM

Synonym: YPTB3004

Alternate gene names: 51597319

Gene position: 3543212-3544003 (Clockwise)

Preceding gene: 51597298

Following gene: 51597320

Centisome position: 74.68

GC content: 48.61

Gene sequence:

>792_bases
ATGGCAATCTCAATCAAAACACCTGAAGATATTCAAAAAATGCGCGTTGCTGGCCGCTTGGCTGCTGAAGTGCTGGAAAT
CATCGAACCCTATGTGAAACCAGGGGTAACAACGGGTGAACTGGATCGTATCTGTCACGATCATATCACCAACCACCAAC
AGGCTATTTCTGCCTGCCTGGGGTATCACGGTTTCCCTAAATCGGTCTGCATCTCGGTAAATGAAGTGATCTGCCACGGC
ATCCCAAGCGATGAAAAAGTGCTGAAAGAGGGTGATATCGTCAATATCGACGTGACCGTGATTAAAGATGGCTTCCATGG
CGATACCTCAAAAATGTTTATTGTTGGTAAACCGACCATTCTGGGTGAACGTCTGTGCCGAGTGACTCAAGAGAGCCTGT
ACCTGGCGATTAAAATGGTTAAACCGGGGATCCGCCTGCGGACGCTGGGTAAAGCTATCCAGAAATTTGTTGAAGCAGAG
AACTTCTCCGTAGTACGTGAATATTGTGGTCACGGGATCGGTGAAGGTTTCCATGAAGAGCCACAAGTTTTACATTACGA
TGCGGATGACGGCGGCGTAGTCTTGCAAACAGGCATGGCCTTCACGATCGAGCCCATGGTGAACGCCGGGGATTACCGGA
TTCGGACCATGAAAGACGGCTGGACGGTAAAAACTAAAGATCGCAGCTTGTCGGCGCAGTATGAGCATACTATTGTGGTA
ACCGATAACGGCTGCGAAATAATGACGTTGCGTAAGGATGACACTATCCCCAACATCATAACGCACGAGTAA

Upstream 100 bases:

>100_bases
ATTAGCCACAGATTTTTATTAATCGACAGTTATCTTTTCATTATCTGCATCTCATTAATAACGGCGGCTGGCTATTTACA
GCCCCTACGGACACTTTTGC

Downstream 100 bases:

>100_bases
TAATGACAAGCCGGCACCGCCGGCTTTTTTATGGGCTGCGTTCCTCATCGGGTAAACATATGTCTGACAATCACACCGAA
CACTCCCTATCGCTGACGCT

Product: methionine aminopeptidase

Products: NA

Alternate protein names: MAP; Peptidase M [H]

Number of amino acids: Translated: 263; Mature: 262

Protein sequence:

>263_residues
MAISIKTPEDIQKMRVAGRLAAEVLEIIEPYVKPGVTTGELDRICHDHITNHQQAISACLGYHGFPKSVCISVNEVICHG
IPSDEKVLKEGDIVNIDVTVIKDGFHGDTSKMFIVGKPTILGERLCRVTQESLYLAIKMVKPGIRLRTLGKAIQKFVEAE
NFSVVREYCGHGIGEGFHEEPQVLHYDADDGGVVLQTGMAFTIEPMVNAGDYRIRTMKDGWTVKTKDRSLSAQYEHTIVV
TDNGCEIMTLRKDDTIPNIITHE

Sequences:

>Translated_263_residues
MAISIKTPEDIQKMRVAGRLAAEVLEIIEPYVKPGVTTGELDRICHDHITNHQQAISACLGYHGFPKSVCISVNEVICHG
IPSDEKVLKEGDIVNIDVTVIKDGFHGDTSKMFIVGKPTILGERLCRVTQESLYLAIKMVKPGIRLRTLGKAIQKFVEAE
NFSVVREYCGHGIGEGFHEEPQVLHYDADDGGVVLQTGMAFTIEPMVNAGDYRIRTMKDGWTVKTKDRSLSAQYEHTIVV
TDNGCEIMTLRKDDTIPNIITHE
>Mature_262_residues
AISIKTPEDIQKMRVAGRLAAEVLEIIEPYVKPGVTTGELDRICHDHITNHQQAISACLGYHGFPKSVCISVNEVICHGI
PSDEKVLKEGDIVNIDVTVIKDGFHGDTSKMFIVGKPTILGERLCRVTQESLYLAIKMVKPGIRLRTLGKAIQKFVEAEN
FSVVREYCGHGIGEGFHEEPQVLHYDADDGGVVLQTGMAFTIEPMVNAGDYRIRTMKDGWTVKTKDRSLSAQYEHTIVVT
DNGCEIMTLRKDDTIPNIITHE

Specific function: Removes the amino-terminal methionine from nascent proteins [H]

COG id: COG0024

COG function: function code J; Methionine aminopeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M24A family [H]

Homologues:

Organism=Homo sapiens, GI164420681, Length=260, Percent_Identity=47.6923076923077, Blast_Score=246, Evalue=2e-65,
Organism=Homo sapiens, GI40385867, Length=248, Percent_Identity=41.1290322580645, Blast_Score=198, Evalue=4e-51,
Organism=Escherichia coli, GI1786364, Length=263, Percent_Identity=84.4106463878327, Blast_Score=471, Evalue=1e-134,
Organism=Escherichia coli, GI1788728, Length=207, Percent_Identity=25.6038647342995, Blast_Score=64, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI71996291, Length=250, Percent_Identity=47.2, Blast_Score=223, Evalue=8e-59,
Organism=Saccharomyces cerevisiae, GI6323273, Length=251, Percent_Identity=48.207171314741, Blast_Score=228, Evalue=9e-61,
Organism=Drosophila melanogaster, GI21355531, Length=253, Percent_Identity=46.2450592885375, Blast_Score=227, Evalue=7e-60,
Organism=Drosophila melanogaster, GI24583427, Length=245, Percent_Identity=41.2244897959184, Blast_Score=196, Evalue=1e-50,

Paralogues:

None

Copy number: 3,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001714
- InterPro:   IPR000994
- InterPro:   IPR002467 [H]

Pfam domain/function: PF00557 Peptidase_M24 [H]

EC number: =3.4.11.18 [H]

Molecular weight: Translated: 29204; Mature: 29073

Theoretical pI: Translated: 6.12; Mature: 6.12

Prosite motif: PS00680 MAP_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAISIKTPEDIQKMRVAGRLAAEVLEIIEPYVKPGVTTGELDRICHDHITNHQQAISACL
CEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHH
GYHGFPKSVCISVNEVICHGIPSDEKVLKEGDIVNIDVTVIKDGFHGDTSKMFIVGKPTI
CCCCCCHHHHEEHHHHHCCCCCCCHHHHHCCCEEEEEEEEEECCCCCCCCEEEEEECCHH
LGERLCRVTQESLYLAIKMVKPGIRLRTLGKAIQKFVEAENFSVVREYCGHGIGEGFHEE
HHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCC
PQVLHYDADDGGVVLQTGMAFTIEPMVNAGDYRIRTMKDGWTVKTKDRSLSAQYEHTIVV
CCEEEEECCCCCEEEECCCEEEEEECCCCCCEEEEEECCCCEEEECCCCCCCCEEEEEEE
TDNGCEIMTLRKDDTIPNIITHE
ECCCCEEEEEECCCCCCCCCCCC
>Mature Secondary Structure 
AISIKTPEDIQKMRVAGRLAAEVLEIIEPYVKPGVTTGELDRICHDHITNHQQAISACL
EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHH
GYHGFPKSVCISVNEVICHGIPSDEKVLKEGDIVNIDVTVIKDGFHGDTSKMFIVGKPTI
CCCCCCHHHHEEHHHHHCCCCCCCHHHHHCCCEEEEEEEEEECCCCCCCCEEEEEECCHH
LGERLCRVTQESLYLAIKMVKPGIRLRTLGKAIQKFVEAENFSVVREYCGHGIGEGFHEE
HHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCC
PQVLHYDADDGGVVLQTGMAFTIEPMVNAGDYRIRTMKDGWTVKTKDRSLSAQYEHTIVV
CCEEEEECCCCCEEEECCCEEEEEECCCCCCEEEEEECCCCEEEECCCCCCCCEEEEEEE
TDNGCEIMTLRKDDTIPNIITHE
ECCCCEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]