| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is ureG
Identifier: 51597254
GI number: 51597254
Start: 3471551
End: 3472213
Strand: Reverse
Name: ureG
Synonym: YPTB2939
Alternate gene names: 51597254
Gene position: 3472213-3471551 (Counterclockwise)
Preceding gene: 51597255
Following gene: 51597253
Centisome position: 73.18
GC content: 48.87
Gene sequence:
>663_bases GTGACCGATAAAAGCACAGCGCGTAAAAAAATAACCCGTATTGGTATTGGTGGTCCGGTAGGTTCGGGGAAAACGGCCAT TATCGAAGTTATTACCCCGATCCTGATTAAACGAGGCATTAAGCCACTGATTATCACCAATGACATCGTGACGACCGAGG ATGCCAAACAGGTAAAACGGACGCTGAAAGGTATTCTGGACGAAGAGAAGATCCTTGGGGTAGAAACTGGCGCTTGCCCA CATACCGCAGTGCGCGAAGACCCGAGCATGAACATTGCTGCGGTAGAAGAGATGGAAGAGCGCTTCCCTGAAAGCGACCT GATTATGATTGAAAGCGGCGGGGATAACCTGACACTGACATTCAGTCCCGCACTGGCAGACTTCTACATCTATGTCATTG ATGTGGCAGAGGGTGAAAAAATTCCTCGTAAAAATGGCCCCGGCTTGGTTCAGGCCGACATTTTAGTGATCAATAAAATT GACCTGGCACCTTATGTCGGTGCCAGCCTGGATGTCATGGAGAGTGATACCAAAGTCGTGCGCGGCAATCGCCCTTATAT TCTGACCAATTGCAAAACTGGCCAGGGCATTGAAGAACTGGTTGATATGATTATGCGAGATTTCCTGTTTACCCACGTAC AGCCGGAAGGAGAACAGGCATGA
Upstream 100 bases:
>100_bases ATGAATAATGTACCGATAAAAATGAATTCAGGGTGCTGCGGTGAGGTGTTAGCCGAGTACCTACCCCAAATCAGATAAAA AGAATGAAGAGGATTATCCC
Downstream 100 bases:
>100_bases CAGCACAGAGCCAGAATATCGTGGAGACGCCTTCACGGGTTCGCGCTCACGCATTAGGTGTTAACGCGCCGGAATTAGCG AAATATCAGGATGAACCGGC
Product: urease accessory protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MTDKSTARKKITRIGIGGPVGSGKTAIIEVITPILIKRGIKPLIITNDIVTTEDAKQVKRTLKGILDEEKILGVETGACP HTAVREDPSMNIAAVEEMEERFPESDLIMIESGGDNLTLTFSPALADFYIYVIDVAEGEKIPRKNGPGLVQADILVINKI DLAPYVGASLDVMESDTKVVRGNRPYILTNCKTGQGIEELVDMIMRDFLFTHVQPEGEQA
Sequences:
>Translated_220_residues MTDKSTARKKITRIGIGGPVGSGKTAIIEVITPILIKRGIKPLIITNDIVTTEDAKQVKRTLKGILDEEKILGVETGACP HTAVREDPSMNIAAVEEMEERFPESDLIMIESGGDNLTLTFSPALADFYIYVIDVAEGEKIPRKNGPGLVQADILVINKI DLAPYVGASLDVMESDTKVVRGNRPYILTNCKTGQGIEELVDMIMRDFLFTHVQPEGEQA >Mature_219_residues TDKSTARKKITRIGIGGPVGSGKTAIIEVITPILIKRGIKPLIITNDIVTTEDAKQVKRTLKGILDEEKILGVETGACPH TAVREDPSMNIAAVEEMEERFPESDLIMIESGGDNLTLTFSPALADFYIYVIDVAEGEKIPRKNGPGLVQADILVINKID LAPYVGASLDVMESDTKVVRGNRPYILTNCKTGQGIEELVDMIMRDFLFTHVQPEGEQA
Specific function: Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by ureG [H]
COG id: COG0378
COG function: function code OK; Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ureG family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003495 - InterPro: IPR012202 - InterPro: IPR004400 [H]
Pfam domain/function: PF02492 cobW [H]
EC number: NA
Molecular weight: Translated: 24007; Mature: 23876
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDKSTARKKITRIGIGGPVGSGKTAIIEVITPILIKRGIKPLIITNDIVTTEDAKQVKR CCCHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCEECCHHHHHHHH TLKGILDEEKILGVETGACPHTAVREDPSMNIAAVEEMEERFPESDLIMIESGGDNLTLT HHHHHCCHHHEEEEECCCCCCCHHCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCEEEEE FSPALADFYIYVIDVAEGEKIPRKNGPGLVQADILVINKIDLAPYVGASLDVMESDTKVV ECCHHEEEEEEEEEECCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCEEEECCCCEEE RGNRPYILTNCKTGQGIEELVDMIMRDFLFTHVQPEGEQA ECCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TDKSTARKKITRIGIGGPVGSGKTAIIEVITPILIKRGIKPLIITNDIVTTEDAKQVKR CCHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCEECCHHHHHHHH TLKGILDEEKILGVETGACPHTAVREDPSMNIAAVEEMEERFPESDLIMIESGGDNLTLT HHHHHCCHHHEEEEECCCCCCCHHCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCEEEEE FSPALADFYIYVIDVAEGEKIPRKNGPGLVQADILVINKIDLAPYVGASLDVMESDTKVV ECCHHEEEEEEEEEECCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCEEEECCCCEEE RGNRPYILTNCKTGQGIEELVDMIMRDFLFTHVQPEGEQA ECCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA