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The map label for this gene is ureD

Identifier: 51597253

GI number: 51597253

Start: 3470589

End: 3471554

Strand: Reverse

Name: ureD

Synonym: YPTB2938

Alternate gene names: 51597253

Gene position: 3471554-3470589 (Counterclockwise)

Preceding gene: 51597254

Following gene: 51597252

Centisome position: 73.17

GC content: 48.03

Gene sequence:

>966_bases
ATGACAGCACAGAGCCAGAATATCGTGGAGACGCCTTCACGGGTTCGCGCTCACGCATTAGGTGTTAACGCGCCGGAATT
AGCGAAATATCAGGATGAACCGGCGCAAATGCGTAGCGGGGCGGTTGGAAAAAGTGGCTATCTGAAACTGAGATTTGCCA
AACGTGAACATCGCAGTATTTTGGCCGAAATGGAAAGGCGGGTGCCCTCATTGGTACAAAAAGCACTGTACTGGGATGAG
GAAATACCTGAGTTACCTTGTGTCACCATGATTTCGACATCAGGTTGTATTTTGCAGGGTGATCGGTTAGCTACTGATGT
GCATGTGGAAGCGGGCGCTTGTGCTCACGTCACCACGCAGTCAGCCACAAAAGTTCACATGATGAATGCGAACTACGCCT
CGCAGATCCAGAATTTCATTGTGGAGGAAGGCGGTTATCTGGAATTTATGCCAGACCCGCTAATTCCTCATCGAAATTCC
CGTTTTATTACTGATACCACGATCAGCATTCATCCAACTGCGACCGCGATTTATTCTGAAGTGCTGATGTCCGGGCGTAA
ATATCACCATGCTGACGAACGATTCGGTTTTGATGTTTATTCCTCTCGGGTGGCAGCACAAAATCTGGCGGGCAAAGAGT
TGTTTGTTGAGAAGTACGTATTAGAACCAAAAGTAGAAAGCCTTGACGCAGTGGGTGTTATGCAAACCTTTGATGCGTTT
GGTAACGTGATTTTATTAACGCCCAAAGAACATCATGACCGCATTCTGGCACGGGTTCCGGCTCATTTTGACATCAAAGG
GGGGATTGCCAGCGGTGCGACGCGTCTACCTAATGATTGTGGATTAGTCTTCAAGGCGTTGGGTATTGATAGCGCGGGTG
TAAAGGCAGAGATTCGCCAATTTTGGAAGATAGCCCGCGAAGAGATTTTAGGCGTTACATTGCCTGAACAATTTTTGTGG
CGCTGA

Upstream 100 bases:

>100_bases
TTCTGACCAATTGCAAAACTGGCCAGGGCATTGAAGAACTGGTTGATATGATTATGCGAGATTTCCTGTTTACCCACGTA
CAGCCGGAAGGAGAACAGGC

Downstream 100 bases:

>100_bases
TTTTGCTGTTTTGATGCGCCATTTTAAGGGGAGAAAAGGGTGAATAAGTCAGTCTATTGAATAGAGGCTGGGTACCCAGC
CTCGGAGGTTATTGACAAAG

Product: urease accessory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 321; Mature: 320

Protein sequence:

>321_residues
MTAQSQNIVETPSRVRAHALGVNAPELAKYQDEPAQMRSGAVGKSGYLKLRFAKREHRSILAEMERRVPSLVQKALYWDE
EIPELPCVTMISTSGCILQGDRLATDVHVEAGACAHVTTQSATKVHMMNANYASQIQNFIVEEGGYLEFMPDPLIPHRNS
RFITDTTISIHPTATAIYSEVLMSGRKYHHADERFGFDVYSSRVAAQNLAGKELFVEKYVLEPKVESLDAVGVMQTFDAF
GNVILLTPKEHHDRILARVPAHFDIKGGIASGATRLPNDCGLVFKALGIDSAGVKAEIRQFWKIAREEILGVTLPEQFLW
R

Sequences:

>Translated_321_residues
MTAQSQNIVETPSRVRAHALGVNAPELAKYQDEPAQMRSGAVGKSGYLKLRFAKREHRSILAEMERRVPSLVQKALYWDE
EIPELPCVTMISTSGCILQGDRLATDVHVEAGACAHVTTQSATKVHMMNANYASQIQNFIVEEGGYLEFMPDPLIPHRNS
RFITDTTISIHPTATAIYSEVLMSGRKYHHADERFGFDVYSSRVAAQNLAGKELFVEKYVLEPKVESLDAVGVMQTFDAF
GNVILLTPKEHHDRILARVPAHFDIKGGIASGATRLPNDCGLVFKALGIDSAGVKAEIRQFWKIAREEILGVTLPEQFLW
R
>Mature_320_residues
TAQSQNIVETPSRVRAHALGVNAPELAKYQDEPAQMRSGAVGKSGYLKLRFAKREHRSILAEMERRVPSLVQKALYWDEE
IPELPCVTMISTSGCILQGDRLATDVHVEAGACAHVTTQSATKVHMMNANYASQIQNFIVEEGGYLEFMPDPLIPHRNSR
FITDTTISIHPTATAIYSEVLMSGRKYHHADERFGFDVYSSRVAAQNLAGKELFVEKYVLEPKVESLDAVGVMQTFDAFG
NVILLTPKEHHDRILARVPAHFDIKGGIASGATRLPNDCGLVFKALGIDSAGVKAEIRQFWKIAREEILGVTLPEQFLWR

Specific function: Required for maturation of urease via the functional incorporation of the urease nickel metallocenter [H]

COG id: COG0829

COG function: function code O; Urease accessory protein UreH

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002669 [H]

Pfam domain/function: PF01774 UreD [H]

EC number: NA

Molecular weight: Translated: 35704; Mature: 35573

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAQSQNIVETPSRVRAHALGVNAPELAKYQDEPAQMRSGAVGKSGYLKLRFAKREHRSI
CCCCCCCCCCCHHHHHHHHCCCCCHHHHHCCCCHHHHHCCCCCCCCCEEEEEHHHHHHHH
LAEMERRVPSLVQKALYWDEEIPELPCVTMISTSGCILQGDRLATDVHVEAGACAHVTTQ
HHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEECCCEEEEEEECCCCEEEEECC
SATKVHMMNANYASQIQNFIVEEGGYLEFMPDPLIPHRNSRFITDTTISIHPTATAIYSE
CCCEEEEECCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEEEEEEEECCHHHHHHHH
VLMSGRKYHHADERFGFDVYSSRVAAQNLAGKELFVEKYVLEPKVESLDAVGVMQTFDAF
HHHCCCCCCCCHHHCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
GNVILLTPKEHHDRILARVPAHFDIKGGIASGATRLPNDCGLVFKALGIDSAGVKAEIRQ
CCEEEECCCHHHHHHHHHCCCCEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHH
FWKIAREEILGVTLPEQFLWR
HHHHHHHHHHCCCCCHHHHCC
>Mature Secondary Structure 
TAQSQNIVETPSRVRAHALGVNAPELAKYQDEPAQMRSGAVGKSGYLKLRFAKREHRSI
CCCCCCCCCCHHHHHHHHCCCCCHHHHHCCCCHHHHHCCCCCCCCCEEEEEHHHHHHHH
LAEMERRVPSLVQKALYWDEEIPELPCVTMISTSGCILQGDRLATDVHVEAGACAHVTTQ
HHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEECCCEEEEEEECCCCEEEEECC
SATKVHMMNANYASQIQNFIVEEGGYLEFMPDPLIPHRNSRFITDTTISIHPTATAIYSE
CCCEEEEECCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEEEEEEEECCHHHHHHHH
VLMSGRKYHHADERFGFDVYSSRVAAQNLAGKELFVEKYVLEPKVESLDAVGVMQTFDAF
HHHCCCCCCCCHHHCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
GNVILLTPKEHHDRILARVPAHFDIKGGIASGATRLPNDCGLVFKALGIDSAGVKAEIRQ
CCEEEECCCHHHHHHHHHCCCCEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHH
FWKIAREEILGVTLPEQFLWR
HHHHHHHHHHCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA