| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51597252
Identifier: 51597252
GI number: 51597252
Start: 3469218
End: 3470210
Strand: Reverse
Name: 51597252
Synonym: YPTB2937
Alternate gene names: NA
Gene position: 3470210-3469218 (Counterclockwise)
Preceding gene: 51597253
Following gene: 51597251
Centisome position: 73.14
GC content: 49.14
Gene sequence:
>993_bases ATGAATGCTAAAACAGTCAACCAATCAGGTTGGGGGCAGCTTGCCAATTCAAATGTTTTCATTGAATTTATCGATACGGC TTTGCGCGGTTGTGCTCAGGTAATGTTTCAGAATAACCCATTGACCGGGCTATTCTTTTTCATCGCAATATTCATAGGTG CTTATGGTGAAGGTAACCCGGCGGTCGCTTATGGTTGTGTTCTGGGAACGCTGGTTGCCACACTTACCGGGTTGAGCATC CGTGACCGGAAATCATGGCGCTCAGGGTTATACGGTTATAACGGCTGTCTGGTGGGGGCCGCACTACCCACCTTTCTGAT CGCCACACCGGTGCTATGGGCCTGCATTGTCTTGGGCAGTATCGTTTCGGTGATTGTTACTGCCTGTATCGCTGATATTT TAAAAACCTGGAAATTGGCTGCACTGACGGCACCTTTTGTCTTAACCACTTGGGTGGTCTTATTGGCCAGTTACGCCTTT GCTGGCCTACATAGCAGTGGATTACCGGCACCGGTTTTACCACAGCAACTGGTTTTAGAGGCCGGTAATACGTTTGCTGG CACCAACATTTTCGTCAGCATGTTCCATGGTGTTTCACAGGTGTTCTTATTCAGTAGCCTGATCGCGGGCATCCTGTTTG TCATCGGGTTGGCCATTGAATCACTTTGGGCGGCTGTTTTTGCTCTGTGCGGAGCCATATTGGCGATCCTCACCGCCACC CTCCTCGAGGCGGACCATCACAGCATTAATGCTGGGCTTTATGCCTTCAGTGCGGTACTTACCGCGATAGCACTGGGGTC GACGTTCAATAAACCCAGTTGGCGGGTTTTAGCTTATACCGTTATCGGGGTTATTTTTACGGTATTCGTTCAAGGCGCAC TGAACACCCTGTTATTACCTATCGGTATTCCTACTTTAACAATGCCTTTTGTATTGGCTTCGTGGCTATTCCTGGTACCG AATAAAGATGTCATGCCAGAGCACCGACAGTAG
Upstream 100 bases:
>100_bases GCCAGTGATCCAAGCAAGTTAAAGCAGCCACATCAATCAGTGATTCCGGGTGAGTGAGAGCAGCGAATACCGCTGCAGCT TCAAGTAGAAGGGTAAAATA
Downstream 100 bases:
>100_bases CGATTAAATTTAAGACATTCTTGGTTCTGAACATGTTACCGGTCATATTTTATCGATCATATAGACCTCAAATTATTGGC GTTATCGTGTTGTCAGCGAT
Product: urea transporter
Products: NA
Alternate protein names: Eukaryotic-Type Low-Affinity Urea Transporter
Number of amino acids: Translated: 330; Mature: 330
Protein sequence:
>330_residues MNAKTVNQSGWGQLANSNVFIEFIDTALRGCAQVMFQNNPLTGLFFFIAIFIGAYGEGNPAVAYGCVLGTLVATLTGLSI RDRKSWRSGLYGYNGCLVGAALPTFLIATPVLWACIVLGSIVSVIVTACIADILKTWKLAALTAPFVLTTWVVLLASYAF AGLHSSGLPAPVLPQQLVLEAGNTFAGTNIFVSMFHGVSQVFLFSSLIAGILFVIGLAIESLWAAVFALCGAILAILTAT LLEADHHSINAGLYAFSAVLTAIALGSTFNKPSWRVLAYTVIGVIFTVFVQGALNTLLLPIGIPTLTMPFVLASWLFLVP NKDVMPEHRQ
Sequences:
>Translated_330_residues MNAKTVNQSGWGQLANSNVFIEFIDTALRGCAQVMFQNNPLTGLFFFIAIFIGAYGEGNPAVAYGCVLGTLVATLTGLSI RDRKSWRSGLYGYNGCLVGAALPTFLIATPVLWACIVLGSIVSVIVTACIADILKTWKLAALTAPFVLTTWVVLLASYAF AGLHSSGLPAPVLPQQLVLEAGNTFAGTNIFVSMFHGVSQVFLFSSLIAGILFVIGLAIESLWAAVFALCGAILAILTAT LLEADHHSINAGLYAFSAVLTAIALGSTFNKPSWRVLAYTVIGVIFTVFVQGALNTLLLPIGIPTLTMPFVLASWLFLVP NKDVMPEHRQ >Mature_330_residues MNAKTVNQSGWGQLANSNVFIEFIDTALRGCAQVMFQNNPLTGLFFFIAIFIGAYGEGNPAVAYGCVLGTLVATLTGLSI RDRKSWRSGLYGYNGCLVGAALPTFLIATPVLWACIVLGSIVSVIVTACIADILKTWKLAALTAPFVLTTWVVLLASYAF AGLHSSGLPAPVLPQQLVLEAGNTFAGTNIFVSMFHGVSQVFLFSSLIAGILFVIGLAIESLWAAVFALCGAILAILTAT LLEADHHSINAGLYAFSAVLTAIALGSTFNKPSWRVLAYTVIGVIFTVFVQGALNTLLLPIGIPTLTMPFVLASWLFLVP NKDVMPEHRQ
Specific function: Unknown
COG id: COG4413
COG function: function code E; Urea transporter
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI157694503, Length=312, Percent_Identity=30.4487179487179, Blast_Score=118, Evalue=7e-27, Organism=Homo sapiens, GI226371768, Length=320, Percent_Identity=28.75, Blast_Score=112, Evalue=6e-25, Organism=Homo sapiens, GI225690519, Length=320, Percent_Identity=28.75, Blast_Score=112, Evalue=6e-25, Organism=Homo sapiens, GI289802991, Length=320, Percent_Identity=28.75, Blast_Score=111, Evalue=8e-25, Organism=Homo sapiens, GI226371772, Length=320, Percent_Identity=28.75, Blast_Score=111, Evalue=8e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35063; Mature: 35063
Theoretical pI: Translated: 7.82; Mature: 7.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAKTVNQSGWGQLANSNVFIEFIDTALRGCAQVMFQNNPLTGLFFFIAIFIGAYGEGNP CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCC AVAYGCVLGTLVATLTGLSIRDRKSWRSGLYGYNGCLVGAALPTFLIATPVLWACIVLGS HHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH IVSVIVTACIADILKTWKLAALTAPFVLTTWVVLLASYAFAGLHSSGLPAPVLPQQLVLE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH AGNTFAGTNIFVSMFHGVSQVFLFSSLIAGILFVIGLAIESLWAAVFALCGAILAILTAT CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLEADHHSINAGLYAFSAVLTAIALGSTFNKPSWRVLAYTVIGVIFTVFVQGALNTLLLP HHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH IGIPTLTMPFVLASWLFLVPNKDVMPEHRQ CCCHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MNAKTVNQSGWGQLANSNVFIEFIDTALRGCAQVMFQNNPLTGLFFFIAIFIGAYGEGNP CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCC AVAYGCVLGTLVATLTGLSIRDRKSWRSGLYGYNGCLVGAALPTFLIATPVLWACIVLGS HHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH IVSVIVTACIADILKTWKLAALTAPFVLTTWVVLLASYAFAGLHSSGLPAPVLPQQLVLE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH AGNTFAGTNIFVSMFHGVSQVFLFSSLIAGILFVIGLAIESLWAAVFALCGAILAILTAT CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLEADHHSINAGLYAFSAVLTAIALGSTFNKPSWRVLAYTVIGVIFTVFVQGALNTLLLP HHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH IGIPTLTMPFVLASWLFLVPNKDVMPEHRQ CCCHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA