| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
Click here to switch to the map view.
The map label for this gene is celA
Identifier: 51597246
GI number: 51597246
Start: 3463468
End: 3463785
Strand: Reverse
Name: celA
Synonym: YPTB2931
Alternate gene names: 51597246
Gene position: 3463785-3463468 (Counterclockwise)
Preceding gene: 51597249
Following gene: 51597245
Centisome position: 73.0
GC content: 44.03
Gene sequence:
>318_bases ATGGAAAAGAAAAAAATTTATCTGTTTTGCTCTGCTGGGATGTCTACCTCGCTATTAGTTTCCAAAATGAAAGTGCAAGC AGAAAAGTATGAAGTGCCGGTTATTATCAATGCTTACCCAGAAGCGCTGGCATCGGCGCAGGGTGCTCATGCTGATGTGA TCCTACTGGGGCCGCAGATCGCCTATATGTTGCCTGAAATAGCCAAAATGTTCCCGAATAAACCCGTCGAAGTGATTGAT ACGCTTCTTTACGGCAAAGTCGATGGGTTAGGGGTATTAAAAGCTGCGGTGGCCGCAATAAAAAAAGCAAAACAATAA
Upstream 100 bases:
>100_bases GTGAGCTAAGGCGCACAATGAGGTACAGATAAAGGGACGTTTACCATTGCAACTGGCATATCAATAACTTGTGTCTTTTG AACATCAAAAGGTGTTGGGT
Downstream 100 bases:
>100_bases GGGGATCACTGTGAGCACATTTATTACGTCGTTGGAGAAGGTCATATTACCCTTCGCCATTAGAATTGGCAGGCAGCAAC ACGTTAATGCCATCAAGAAC
Product: PTS system N,N'-diacetylchitobiose-specific transporter subunit IIB
Products: NA
Alternate protein names: PTS system N,N'-diacetylchitobiose-specific EIIB component [H]
Number of amino acids: Translated: 105; Mature: 105
Protein sequence:
>105_residues MEKKKIYLFCSAGMSTSLLVSKMKVQAEKYEVPVIINAYPEALASAQGAHADVILLGPQIAYMLPEIAKMFPNKPVEVID TLLYGKVDGLGVLKAAVAAIKKAKQ
Sequences:
>Translated_105_residues MEKKKIYLFCSAGMSTSLLVSKMKVQAEKYEVPVIINAYPEALASAQGAHADVILLGPQIAYMLPEIAKMFPNKPVEVID TLLYGKVDGLGVLKAAVAAIKKAKQ >Mature_105_residues MEKKKIYLFCSAGMSTSLLVSKMKVQAEKYEVPVIINAYPEALASAQGAHADVILLGPQIAYMLPEIAKMFPNKPVEVID TLLYGKVDGLGVLKAAVAAIKKAKQ
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG1440
COG function: function code G; Phosphotransferase system cellobiose-specific component IIB
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIB type-3 domain [H]
Homologues:
Organism=Escherichia coli, GI1788034, Length=93, Percent_Identity=81.7204301075269, Blast_Score=160, Evalue=2e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014350 - InterPro: IPR003501 - InterPro: IPR013012 [H]
Pfam domain/function: PF02302 PTS_IIB [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 11322; Mature: 11322
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: PS51100 PTS_EIIB_TYPE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKKKIYLFCSAGMSTSLLVSKMKVQAEKYEVPVIINAYPEALASAQGAHADVILLGPQI CCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEECCHHHHHHCCCCCCEEEEECCHH AYMLPEIAKMFPNKPVEVIDTLLYGKVDGLGVLKAAVAAIKKAKQ HHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MEKKKIYLFCSAGMSTSLLVSKMKVQAEKYEVPVIINAYPEALASAQGAHADVILLGPQI CCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEECCHHHHHHCCCCCCEEEEECCHH AYMLPEIAKMFPNKPVEVIDTLLYGKVDGLGVLKAAVAAIKKAKQ HHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]