| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is nagK [H]
Identifier: 51596761
GI number: 51596761
Start: 2883208
End: 2884122
Strand: Reverse
Name: nagK [H]
Synonym: YPTB2439
Alternate gene names: 51596761
Gene position: 2884122-2883208 (Counterclockwise)
Preceding gene: 51596762
Following gene: 51596760
Centisome position: 60.79
GC content: 50.49
Gene sequence:
>915_bases ATGTATTACGGTTTTGATATGGGCGGGACCAAAATAGAGCTAGGCGTTTTTGATGAAAACCTGCAGCGAATATGGCATAA GCGAGTGCCTACGCCACGTGAGGATTACCCGCAGTTACTGCAAATATTGCGGGATTTAACCGAGGAAGCCGATACTTATT GCGGTGTTCAAGGCAGTGTGGGTATCGGTATTCCAGGGCTACCCAATGCGGATGATGGCACGGTATTTACTGCGAATGTA CCGTCTGCGATGGGGCAACCATTGCAGGCTGATCTTTCCCGCTTGATCCAGCGTGAAGTCCGTATTGATAACGATGCCAA CTGTTTTGCTCTCTCCGAAGCCTGGGACCCTGAGTTTCGCACTTACCCAACGGTGCTGGGGCTTATTCTCGGCACCGGTG TTGGTGGTGGGTTAATTGTTAATGGCAGTATTGTCAGTGGGCGTAACCACATCACTGGCGAGTTCGGTCATTTCCGTTTA CCAGTAGATGCACTGGATATTCTTGGTGCCGATATTCCCCGCGTCCCCTGTGGTTGTGGCCATCGCGGTTGTATAGAGAA TTATATTTCTGGGCGCGGTTTCGAGTGGATGTACAGTCATTTTTATCAACATACTTTACCTGCCACCGACATTATTGCCC ATTATGCTGCGGGTGAGCCAAAGGCGGTGGCACATGTTGAGCGCTTTATGGATGTGCTGGCGGTCTGTTTGGGCAATCTT TTGACTATGCTCGATCCCCATTTGGTCGTGGTGGGTGGGGGGTTGTCTAATTTCGAAAAAATCTATCAGGAGCTGCCAAA GCGCTTGCCTGCGCATTTATTGCGAGTGGCCCGGTTACCGCGTATCGAAAAAGCGCGTTATGGTGATTCCGGGGGCGTTC GTGGTGCAGCGTTTCTGCATTTGGCAGAAAAATAA
Upstream 100 bases:
>100_bases GGTGCTCAGCTTGATTGCCAGTTGGTATCCGGCACGTCGCGCCAGCCGTATTGATCCGGCACGGGTCCTCAGCGGGCAGT AATTGAAGAAAGGCAAGCTT
Downstream 100 bases:
>100_bases TCGTCACGATTAATAACAAGACAGATAAAGAAAAAGAGGCAAAAGGTTATGCGCATTCGCCATAGGCTGTGTCGGTTTCG TAAGAGTAAGCATGTGCGGC
Product: N-acetyl-D-glucosamine kinase
Products: NA
Alternate protein names: GlcNAc kinase [H]
Number of amino acids: Translated: 304; Mature: 304
Protein sequence:
>304_residues MYYGFDMGGTKIELGVFDENLQRIWHKRVPTPREDYPQLLQILRDLTEEADTYCGVQGSVGIGIPGLPNADDGTVFTANV PSAMGQPLQADLSRLIQREVRIDNDANCFALSEAWDPEFRTYPTVLGLILGTGVGGGLIVNGSIVSGRNHITGEFGHFRL PVDALDILGADIPRVPCGCGHRGCIENYISGRGFEWMYSHFYQHTLPATDIIAHYAAGEPKAVAHVERFMDVLAVCLGNL LTMLDPHLVVVGGGLSNFEKIYQELPKRLPAHLLRVARLPRIEKARYGDSGGVRGAAFLHLAEK
Sequences:
>Translated_304_residues MYYGFDMGGTKIELGVFDENLQRIWHKRVPTPREDYPQLLQILRDLTEEADTYCGVQGSVGIGIPGLPNADDGTVFTANV PSAMGQPLQADLSRLIQREVRIDNDANCFALSEAWDPEFRTYPTVLGLILGTGVGGGLIVNGSIVSGRNHITGEFGHFRL PVDALDILGADIPRVPCGCGHRGCIENYISGRGFEWMYSHFYQHTLPATDIIAHYAAGEPKAVAHVERFMDVLAVCLGNL LTMLDPHLVVVGGGLSNFEKIYQELPKRLPAHLLRVARLPRIEKARYGDSGGVRGAAFLHLAEK >Mature_304_residues MYYGFDMGGTKIELGVFDENLQRIWHKRVPTPREDYPQLLQILRDLTEEADTYCGVQGSVGIGIPGLPNADDGTVFTANV PSAMGQPLQADLSRLIQREVRIDNDANCFALSEAWDPEFRTYPTVLGLILGTGVGGGLIVNGSIVSGRNHITGEFGHFRL PVDALDILGADIPRVPCGCGHRGCIENYISGRGFEWMYSHFYQHTLPATDIIAHYAAGEPKAVAHVERFMDVLAVCLGNL LTMLDPHLVVVGGGLSNFEKIYQELPKRLPAHLLRVARLPRIEKARYGDSGGVRGAAFLHLAEK
Specific function: Catalyzes the phosphorylation of N-acetyl-D-glucosamine (GlcNAc) derived from cell-wall degradation, yielding GlcNAc-6-P [H]
COG id: COG1940
COG function: function code KG; Transcriptional regulator/sugar kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ROK (nagC/xylR) family. NagK subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787363, Length=303, Percent_Identity=64.3564356435644, Blast_Score=410, Evalue=1e-116, Organism=Escherichia coli, GI87081733, Length=299, Percent_Identity=39.7993311036789, Blast_Score=211, Evalue=5e-56, Organism=Escherichia coli, GI1790522, Length=308, Percent_Identity=26.6233766233766, Blast_Score=69, Evalue=3e-13,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000600 [H]
Pfam domain/function: PF00480 ROK [H]
EC number: =2.7.1.59 [H]
Molecular weight: Translated: 33322; Mature: 33322
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: PS01125 ROK
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYYGFDMGGTKIELGVFDENLQRIWHKRVPTPREDYPQLLQILRDLTEEADTYCGVQGSV CCEEECCCCCEEEEEECHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC GIGIPGLPNADDGTVFTANVPSAMGQPLQADLSRLIQREVRIDNDANCFALSEAWDPEFR CCCCCCCCCCCCCEEEEECCCHHHCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHH TYPTVLGLILGTGVGGGLIVNGSIVSGRNHITGEFGHFRLPVDALDILGADIPRVPCGCG HHHHHHHHHHHCCCCCCEEEECEEECCCCCCCCCCCCEECCHHHHHHHCCCCCCCCCCCC HRGCIENYISGRGFEWMYSHFYQHTLPATDIIAHYAAGEPKAVAHVERFMDVLAVCLGNL CHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH LTMLDPHLVVVGGGLSNFEKIYQELPKRLPAHLLRVARLPRIEKARYGDSGGVRGAAFLH HHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCHHEEEE LAEK ECCC >Mature Secondary Structure MYYGFDMGGTKIELGVFDENLQRIWHKRVPTPREDYPQLLQILRDLTEEADTYCGVQGSV CCEEECCCCCEEEEEECHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC GIGIPGLPNADDGTVFTANVPSAMGQPLQADLSRLIQREVRIDNDANCFALSEAWDPEFR CCCCCCCCCCCCCEEEEECCCHHHCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHH TYPTVLGLILGTGVGGGLIVNGSIVSGRNHITGEFGHFRLPVDALDILGADIPRVPCGCG HHHHHHHHHHHCCCCCCEEEECEEECCCCCCCCCCCCEECCHHHHHHHCCCCCCCCCCCC HRGCIENYISGRGFEWMYSHFYQHTLPATDIIAHYAAGEPKAVAHVERFMDVLAVCLGNL CHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH LTMLDPHLVVVGGGLSNFEKIYQELPKRLPAHLLRVARLPRIEKARYGDSGGVRGAAFLH HHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCHHEEEE LAEK ECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA